Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001344-TA|BGIBMGA001344-PA|IPR011009|Protein
kinase-like, IPR002290|Serine/threonine protein kinase,
IPR000719|Protein kinase, IPR008271|Serine/threonine protein kinase,
active site
         (255 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    76   3e-16
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    63   3e-12
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    63   3e-12
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    63   3e-12
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                62   6e-12
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    57   1e-10
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    46   3e-07
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    27   0.22 
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    24   1.6  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    22   4.7  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 76.2 bits (179), Expect = 3e-16
 Identities = 65/243 (26%), Positives = 113/243 (46%), Gaps = 15/243 (6%)

Query: 14  ASINDVSALFQNA--QKYEELSLIGTGAYGTVYKARDLHNGGQIVAMKKVKVA-LTEDGI 70
           A+I +++  F++   Q    L+ +G G +G V   +   +  +  A+K++K A + E   
Sbjct: 350 ATIPELNEEFRDLRLQDLRPLATLGVGGFGRVELVQIAGDSSRSFALKQMKKAQIVETRQ 409

Query: 71  PLSTVREIALLRQLEAYRHPNIVRLLDVCHGGQCLERDQQLVLFLVFEHVEQDLDSFLSR 130
               + E  ++ + +      +V+L           +D++ +  L+   +  +L + L R
Sbjct: 410 QQHIMSEKRIMGEADC---DFVVKLFKTF-------KDRKYLYMLMEACLGGELWTVL-R 458

Query: 131 APGPLPESRIRSMSHDIISGVDFLHSHRIVHRDLKPHNLLVTVAGRVKLADFGLAKTYDV 190
             G   +   R  +  ++   D+LHS  I++RDLKP NLL+   G VKL DFG AK  D 
Sbjct: 459 DKGHFDDGTTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLDSQGYVKLVDFGFAKRLDH 518

Query: 191 EMKLTSVVVTLWYRPPEVLLGARYCSALDVWSAGCVLAQLHTRRPLLPGASDSDQLHRIF 250
             K  +   T  Y  PEV+L   +  + D WS G ++ +L T  P   G  D  + + I 
Sbjct: 519 GRKTWTFCGTPEYVAPEVILNKGHDISADYWSLGVLMFELLTGTPPFTG-GDPMKTYNII 577

Query: 251 RSG 253
             G
Sbjct: 578 LKG 580



 Score = 21.4 bits (43), Expect = 8.3
 Identities = 28/146 (19%), Positives = 59/146 (40%), Gaps = 8/146 (5%)

Query: 39  AYGTVYKARDLHNGGQIVAMKKVKVALTEDGIPLSTVREIALLRQLEAYRHPNIVRLLDV 98
           A  T+ +  D+  G  +  M++ KV ++ DG  LST+    +L +L    +      +  
Sbjct: 125 AGSTIIREGDV--GSIVYVMEEGKVEVSRDGKYLSTLAPGKVLGELAILYNCKRTATITA 182

Query: 99  CHGGQCLERDQQLVLFLVFE---HVEQDLDSFLSRAP--GPLPESRIRSMSHDIISGVDF 153
               Q    D+Q    ++       + +   FL   P    LPE  +  +S D++    +
Sbjct: 183 ATDCQLWAIDRQCFQTIMMRTGLSRQAEYTDFLKSVPIFKNLPEETLIKIS-DVLEETFY 241

Query: 154 LHSHRIVHRDLKPHNLLVTVAGRVKL 179
            +   I+ +  +     +   G+V++
Sbjct: 242 NNGDYIIRQGARGDTFFIISRGQVRV 267


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 62.9 bits (146), Expect = 3e-12
 Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 6/93 (6%)

Query: 146 DIISGVDFLHSHRIVHRDLKPHNLLVTVAGRVKLADFGLAKTYDVEMKLTSVVVTLWYRP 205
           D++ G+ +LHS  +VHRD+K  N+L+ +  R KL DFG   T +V M L S+V T  +  
Sbjct: 705 DVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFCIT-EV-MMLGSIVGTPVHMA 762

Query: 206 PEVLLGARYCSALDVWSAGCVLAQL---HTRRP 235
           PE+L G  Y S++DV++ G +   L   H R P
Sbjct: 763 PELLSG-HYDSSVDVYAFGILFWYLCAGHVRLP 794


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 62.9 bits (146), Expect = 3e-12
 Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 6/93 (6%)

Query: 146 DIISGVDFLHSHRIVHRDLKPHNLLVTVAGRVKLADFGLAKTYDVEMKLTSVVVTLWYRP 205
           D++ G+ +LHS  +VHRD+K  N+L+ +  R KL DFG   T +V M L S+V T  +  
Sbjct: 743 DVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFCIT-EV-MMLGSIVGTPVHMA 800

Query: 206 PEVLLGARYCSALDVWSAGCVLAQL---HTRRP 235
           PE+L G  Y S++DV++ G +   L   H R P
Sbjct: 801 PELLSG-HYDSSVDVYAFGILFWYLCAGHVRLP 832


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 62.9 bits (146), Expect = 3e-12
 Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 21/203 (10%)

Query: 33  SLIGTGAYGTVYKAR-DLHNGGQI---VAMKKVKVALTEDGIPLSTVREIALLRQLEAYR 88
           ++IG G +G V + +  L   G+    VA+K +K   + D      + E +++ Q E   
Sbjct: 637 AIIGGGEFGDVCRGKLKLPPDGRTEIDVAIKTLKPG-SADKARNDFLTEASIMGQFE--- 692

Query: 89  HPNIVRLLDVCHGGQCLERDQQLVLFLVFEHVEQ-DLDSFLSRAPGPLPESRIRSMSHDI 147
           HPN++ L  V          +   + ++ E +E   LD+FL    G     ++  M   I
Sbjct: 693 HPNVIFLQGVV--------TKSNPVMIITEFMENGSLDTFLRANDGKFQVLQLVGMLRGI 744

Query: 148 ISGVDFLHSHRIVHRDLKPHNLLVTVAGRVKLADFGLAKTYD--VEMKLTS--VVVTLWY 203
            SG+ +L     VHRDL   N+LV  A   K+ADFGL++  +   E   T+    + + +
Sbjct: 745 ASGMQYLAEMNYVHRDLAARNVLVNAALVCKIADFGLSREIESATEGAYTTRGGKIPVRW 804

Query: 204 RPPEVLLGARYCSALDVWSAGCV 226
             PE +   ++ SA DVWS G V
Sbjct: 805 TAPEAIAFRKFTSASDVWSMGIV 827


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 61.7 bits (143), Expect = 6e-12
 Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 23/203 (11%)

Query: 33  SLIGTGAYGTVYKARDLHNGGQIVAMKKVKVALTED-GIPLSTVREIALLRQLEAYRHPN 91
           + +G+G +G VYKA  L+ G Q+ A    K+  TE     L++ +  + L+      H N
Sbjct: 71  TFLGSGGFGIVYKA--LYKGEQVAA----KIIQTEKYSNMLNSEKHASFLK------HSN 118

Query: 92  IVRLLDVCHGGQCLERDQQLVLFLVFEHVEQDLDSFLSRAPGPLPESRIRSMSHDIISGV 151
           IV++L +  G         + + L    ++  LD  +      +   RI  +   I   +
Sbjct: 119 IVKVLMIEQGASL----SLITMELCGTTLQNRLDEAIL-----IKNERICILK-SITCAL 168

Query: 152 DFLHSHRIVHRDLKPHNLLVTVAGRVKLADFGLAKTYDVEMKLTSVVVTLWYRPPEVLLG 211
            F H+  IVH D+KP N+L++  G+ KL DFG +       ++     T  Y  PEV+  
Sbjct: 169 QFCHNAGIVHADVKPKNILMSKNGQPKLTDFGSSVLIGAPNEIDKFYGTPGYTAPEVIKQ 228

Query: 212 ARYCSALDVWSAGCVLAQLHTRR 234
            R   A D++S G V  Q+  R+
Sbjct: 229 NRPTPAADIYSLGIVAWQMLFRK 251


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 57.2 bits (132), Expect = 1e-10
 Identities = 41/108 (37%), Positives = 53/108 (49%), Gaps = 8/108 (7%)

Query: 147 IISGVDFLHSHRIVHRDLKPHNLLVTVAGR---VKLADFGLAKTYDVEMKL-TSVVVTLW 202
           I+  V   H + +VHRDLKP NLL+    +   VKLADFGLA     E +       T  
Sbjct: 18  ILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEAQAWFGFAGTPG 77

Query: 203 YRPPEVLLGARYCSALDVWSAGCVLAQLHTRRPLLPGASDSDQLHRIF 250
           Y  PEVL    Y   +D+W+ G +L  L       P   D DQ HR++
Sbjct: 78  YLSPEVLKKEPYGKPVDIWACGVILYILLVG---YPPFWDEDQ-HRLY 121


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 46.4 bits (105), Expect = 3e-07
 Identities = 26/74 (35%), Positives = 39/74 (52%)

Query: 113 LFLVFEHVEQDLDSFLSRAPGPLPESRIRSMSHDIISGVDFLHSHRIVHRDLKPHNLLVT 172
           L+ V E+V      +  +  G   E      + +I  G+ FLH   IV+RDLK  N+L+ 
Sbjct: 60  LYFVMEYVNGGDLMYQIQQCGKFKEPVAVFYASEIAIGLFFLHGRGIVYRDLKLDNVLLD 119

Query: 173 VAGRVKLADFGLAK 186
             G +K+ADFG+ K
Sbjct: 120 QDGHIKIADFGMCK 133


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 9/14 (64%), Positives = 11/14 (78%)

Query: 214 YCSALDVWSAGCVL 227
           Y  ALDVW AGC++
Sbjct: 258 YVKALDVWMAGCMM 271


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)

Query: 151 VDFLHSHRIVHRDL-KPHNLLVTVAGRVKLADFGLAKTYDVEMKLTSVVVTLWYRPP 206
           ++ ++ H IV   L  P ++   V GR++    GL   Y +   L S++ +   R P
Sbjct: 456 IEPIYFHSIVLGSLLNPSHMYRAVCGRIENTIQGLPPPYRLNKPLMSLITSSEVRQP 512


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query: 29  YEELSLIGTGAYGTVYKARDLH 50
           YE +  IGTG   T  +A+++H
Sbjct: 163 YEPVWAIGTGKTATPQQAQEVH 184


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.137    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,384
Number of Sequences: 429
Number of extensions: 2819
Number of successful extensions: 24
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 12
length of query: 255
length of database: 140,377
effective HSP length: 56
effective length of query: 199
effective length of database: 116,353
effective search space: 23154247
effective search space used: 23154247
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 43 (21.4 bits)