Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001343-TA|BGIBMGA001343-PA|IPR000608|Ubiquitin-
conjugating enzyme, E2
(201 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical pr... 109 1e-24
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 60 1e-09
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 60 1e-09
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 49 2e-06
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 48 6e-06
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 45 3e-05
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 45 3e-05
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 45 3e-05
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 45 4e-05
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 42 4e-04
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 42 4e-04
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 41 7e-04
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 41 7e-04
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 39 0.003
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 37 0.009
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 36 0.026
Z70306-2|CAA94323.2| 785|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF000417-1|AAC39118.1| 785|Caenorhabditis elegans high-affinity... 29 3.0
AC024791-31|AAF60655.1| 181|Caenorhabditis elegans Hypothetical... 28 4.0
Z72511-4|CAA96660.1| 395|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical pr... 27 7.0
AL590342-2|CAC35859.3| 685|Caenorhabditis elegans Hypothetical ... 27 9.2
AL032622-4|CAA21499.1| 738|Caenorhabditis elegans Y66A7A.5 prot... 27 9.2
>Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical
protein Y69H2.6 protein.
Length = 292
Score = 109 bits (262), Expect = 1e-24
Identities = 63/169 (37%), Positives = 94/169 (55%), Gaps = 7/169 (4%)
Query: 9 GIYVIPSYESSFLWYGVIFVRSGLYEGGVFRFTITLPEKFPD-DETPVLTF-VSNLYHPA 66
GI+V PS + FLW+GVIFVR G++ GG+FRF I +P +FPD + P + F SNL+HP
Sbjct: 38 GIFVSPSANNKFLWFGVIFVRKGIFGGGIFRFNIHIPLEFPDASDLPRVIFEQSNLFHPL 97
Query: 67 IDASTGLLSLREVFPM-WDKKRDHVWQILKYLHIIFDNLSIKVP--ANTEAACMYKTNRK 123
I + L L FP W K++ + ++L L F + + N EA+ +YK +R
Sbjct: 98 ICTKSKELCLNRSFPEGWKKEKHSLRRVLVVLQRSFYSYDVDTDKCINPEASVLYKEHRD 157
Query: 124 FFMQKVRECVVTSIDHIYDD--PPTEDKHYITFKPYDPDIHEKAKDIML 170
F + +ECV S +YD+ D + I P+D H+ A++ ML
Sbjct: 158 KFREIAKECVEASRSMVYDELAEQEHDPNGIRLLPWDALTHKAAREKML 206
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 59.7 bits (138), Expect = 1e-09
Identities = 37/136 (27%), Positives = 71/136 (52%), Gaps = 4/136 (2%)
Query: 2 LQTENLRGIYVIPSYESSFLWYGVIF-VRSGLYEGGVFRFTITLPEKFPDDETPVLTFVS 60
LQ + G+ P+ ++ W +IF + +E G F+ ++ E++P+ + P + F+S
Sbjct: 16 LQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPN-KPPTVKFIS 74
Query: 61 NLYHPAIDASTGLLSLREVFPMWDKKRDHVWQILKYLHIIFDNLSIKVPANTEAACMYKT 120
++HP + A G + L + W D V IL + + D + PAN+ AA +Y+
Sbjct: 75 KMFHPNVYAD-GSICLDILQNRWSPTYD-VAAILTSIQSLLDEPNPNSPANSLAAQLYQE 132
Query: 121 NRKFFMQKVRECVVTS 136
NR+ + ++V++ V S
Sbjct: 133 NRREYEKRVQQIVEQS 148
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 59.7 bits (138), Expect = 1e-09
Identities = 37/136 (27%), Positives = 71/136 (52%), Gaps = 4/136 (2%)
Query: 2 LQTENLRGIYVIPSYESSFLWYGVIF-VRSGLYEGGVFRFTITLPEKFPDDETPVLTFVS 60
LQ + G+ P+ ++ W +IF + +E G F+ ++ E++P+ + P + F+S
Sbjct: 16 LQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPN-KPPTVKFIS 74
Query: 61 NLYHPAIDASTGLLSLREVFPMWDKKRDHVWQILKYLHIIFDNLSIKVPANTEAACMYKT 120
++HP + A G + L + W D V IL + + D + PAN+ AA +Y+
Sbjct: 75 KMFHPNVYAD-GSICLDILQNRWSPTYD-VAAILTSIQSLLDEPNPNSPANSLAAQLYQE 132
Query: 121 NRKFFMQKVRECVVTS 136
NR+ + ++V++ V S
Sbjct: 133 NRREYEKRVQQIVEQS 148
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 49.2 bits (112), Expect = 2e-06
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 33 YEGGVFRFTITLPEKFPDDETPVLTFVSNLYHPAIDASTGLLSLREVFPMWDKKRDHVWQ 92
YE GV+R + +P+K+P ++P + F++ ++HP ID ++G + L + W D
Sbjct: 47 YENGVWRIRVDMPDKYP-FKSPSIGFLNKIFHPNIDEASGTVCLDVINQAWTALYDLTNI 105
Query: 93 ILKYLHIIFDNLSIKVPANTEAACMYKTNRKFFMQKVRECVV 134
+L + + P N EAA +Y + + + RE V+
Sbjct: 106 FDTFLPQLLTYPNAADPLNGEAARLYIHKPEEYRRTCREYVM 147
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 47.6 bits (108), Expect = 6e-06
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 29 RSGLYEGGVFRFTITLPEKFPDDETPVLTFVSNLYHPAI--DASTGLLSLREVF---PMW 83
+ G+Y GG FRF IT+P ++ ++ PV+ ++ ++HP I D S L LR+ W
Sbjct: 68 QEGIYRGGKFRFKITVPPEY-NNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGW 126
Query: 84 DKKRDHVWQILKYLHIIFDNLSIKVPANTEAACMYKTNRKFFMQKVRECV 133
R+ + + + D + N +AA M+ NR+ F +VRE +
Sbjct: 127 RPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVREYI 176
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 45.2 bits (102), Expect = 3e-05
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 4/119 (3%)
Query: 14 PSYESSFLWYGVIF-VRSGLYEGGVFRFTITLPEKFPDDETPVLTFVSNLYHPAIDASTG 72
P + F W I Y+GGVF TI P +P + P + F + +YHP I+ S G
Sbjct: 25 PVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYP-FKPPKVAFTTRIYHPNIN-SNG 82
Query: 73 LLSLREVFPMWDKKRDHVWQILKYLHIIFDNLSIKVPANTEAACMYKTNRKFFMQKVRE 131
+ L + W +L ++ D + P E A +YKT+R+ + Q RE
Sbjct: 83 SICLDILRSQWSPALTISKVLLSICSLLCDP-NPDDPLVPEIARIYKTDRERYNQLARE 140
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 45.2 bits (102), Expect = 3e-05
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 33 YEGGVFRFTITLPEKFPDDETPVLTFVSNLYHPAIDASTGLLSLREV-FPMWDKKRDHVW 91
YEGG+F I + E +P + P + F++ ++HP++ G + L +V +W ++
Sbjct: 393 YEGGIFELDIKIGESYPF-KAPTVKFITKIWHPSVSPFDGTICLHDVDNGVWPVSMT-IY 450
Query: 92 QILKYLHIIFDNLSIKVPANTEAACMYKTNRKFF 125
++L + N + K P + E NR+ F
Sbjct: 451 KVLIVIQSWMSNFNEKEPIDVEILEQATNNREVF 484
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 45.2 bits (102), Expect = 3e-05
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 4/119 (3%)
Query: 14 PSYESSFLWYGVIF-VRSGLYEGGVFRFTITLPEKFPDDETPVLTFVSNLYHPAIDASTG 72
P + F W I Y+GGVF TI P +P + P + F + +YHP I+ S G
Sbjct: 25 PVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYP-FKPPKVAFTTRIYHPNIN-SNG 82
Query: 73 LLSLREVFPMWDKKRDHVWQILKYLHIIFDNLSIKVPANTEAACMYKTNRKFFMQKVRE 131
+ L + W +L ++ D + P E A +YKT+R+ + Q RE
Sbjct: 83 SICLDILRSQWSPALTISKVLLSICSLLCDP-NPDDPLVPEIARIYKTDRERYNQLARE 140
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 44.8 bits (101), Expect = 4e-05
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 12/113 (10%)
Query: 32 LYEGGVFRFTITLPEKFPDDETPVLTFVSNLYHPAIDASTGLLSLREVFPMWDK----KR 87
LYEGG F+ + P +P + P + F+S ++HP ID + P DK +
Sbjct: 47 LYEGGFFKAILDFPRDYP-QKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERP 105
Query: 88 DHVW-------QILKYLHIIFDNLSIKVPANTEAACMYKTNRKFFMQKVRECV 133
+ W IL + + + + + PAN +AA M + N F +KV +CV
Sbjct: 106 EERWLPVHTVETILLSVISMLTDPNFESPANVDAAKMQRENYAEFKKKVAQCV 158
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 41.5 bits (93), Expect = 4e-04
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 32 LYEGGVFRFTITLPEKFPDDETPVLTFVSNLYHPAIDAS-TGLLSLREVFPMWDKKRDHV 90
++EGG++R + + FP P F L+HP + S T LSL + W K +
Sbjct: 52 IWEGGLYRIRMLFKDDFPSTP-PKCKFEPPLFHPNVYPSGTVCLSLLDENKDW-KPSISI 109
Query: 91 WQILKYLHIIFDNLSIKVPANTEAACMYKTNRKFFMQKVRE 131
Q+L + + ++ +I+ PA EA +Y NR + ++V++
Sbjct: 110 KQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKK 150
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 41.5 bits (93), Expect = 4e-04
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 32 LYEGGVFRFTITLPEKFPDDETPVLTFVSNLYHPAIDAS-TGLLSLREVFPMWDKKRDHV 90
++EGG++R + + FP P F L+HP + S T LSL + W K +
Sbjct: 52 IWEGGLYRIRMLFKDDFPSTP-PKCKFEPPLFHPNVYPSGTVCLSLLDENKDW-KPSISI 109
Query: 91 WQILKYLHIIFDNLSIKVPANTEAACMYKTNRKFFMQKVRE 131
Q+L + + ++ +I+ PA EA +Y NR + ++V++
Sbjct: 110 KQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKK 150
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 40.7 bits (91), Expect = 7e-04
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 32 LYEGGVFRFTITLPEKFPDDETPVLTFVSNLYHPAIDAST-GLLSLREVFPMWDKKRDHV 90
LY+ +F T+ + ++P + P L F N+YHP +D T L S + W K +
Sbjct: 56 LYKNMIFTLTLDVNVEYPF-KPPYLKFCHNVYHPNVDPVTCELCSPMLLQENW-KPETTM 113
Query: 91 WQILKYLHIIFDNLSIKVPANTEAACMYKTNRKFFMQKVRE 131
+L L ++ + + P N +AA Y N+ F++K E
Sbjct: 114 EDVLLNLIVLLNEPDLSRPVNIDAAHDYIHNKVEFVKKSTE 154
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 40.7 bits (91), Expect = 7e-04
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 33 YEGGVFRFTITLPEKFPDDETPVLTFVSNLYHPAIDASTGLLSLREVFPMWDKKRDHVWQ 92
+ GGVF+ + LPE++P P + F++ +YHP ID G + L + W +
Sbjct: 48 FAGGVFKLELFLPEEYP-MAAPKVRFMTKIYHPNID-KLGRICLDILKDKWSPAL-QIRT 104
Query: 93 ILKYLHIIFDNLSIKVPANTEAACMYKTN 121
+L + + + + P T+ A +KTN
Sbjct: 105 VLLSIQALLSAPNPEDPLATDVAEQWKTN 133
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 2 LQTENLRGIYVIPSYESSFLW-YGVIFVRSGLYEGGVFRFTITLPEKFPDDETPVLTFVS 60
LQ++ + G + + ++ F+W G+ LY+GG F+ +I P +P P + F +
Sbjct: 22 LQSQPVEGFTIDVNEDNLFVWTVGIYGPPKTLYQGGYFKASIRFPSNYP-YSPPSMKFTT 80
Query: 61 NLYHPAI 67
++HP +
Sbjct: 81 KVWHPNV 87
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 37.1 bits (82), Expect = 0.009
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 33 YEGGVFRFTITLPEKFPDDETPVLTFVSNLYHPAIDASTGLLSLREVFPMW 83
Y GG+F I +P+++P P + F + ++HP + + TG++ L + W
Sbjct: 51 YAGGMFDLDIKIPDQYPFSP-PNVKFSTKIWHPNVSSQTGVICLDILKDQW 100
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 35.5 bits (78), Expect = 0.026
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 33 YEGGVFRFTITLPEKFPDDETPVLTFVSNLYHPAIDASTGLLSLREVFPMWDKKRDHVWQ 92
YE GVF +T P+ +P + P + F + +++ A++ STG + + + R +V +
Sbjct: 43 YETGVFEVDLTFPDNYP-NALPQIKFQTLIWNCAVEPSTGQVHIE------NYSRLNVSE 95
Query: 93 ILKYLHIIFDNLSIKVPANTEAACMYKTNR 122
L Y+ +F ++ + E YKT R
Sbjct: 96 ALSYIEDLFRSIEV-----DEEVMFYKTAR 120
>Z70306-2|CAA94323.2| 785|Caenorhabditis elegans Hypothetical
protein C06G8.2 protein.
Length = 785
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 128 KVRECVVTSIDHIYDDPPTEDKHYITFKPYDPDIHEKAKDIMLTAFKPTEGATQGMSWVQ 187
KV V+T +++ D P + K Y+ D+H+ +K +TAF G T ++
Sbjct: 554 KVESDVITDNNNVCD-PTAKGKFYVLSNANPLDVHDFSKKSTVTAF----GRTYSPIEMK 608
Query: 188 QGCYQPFSKEET 199
G Y+ F +++
Sbjct: 609 PGTYRLFYTDDS 620
>AF000417-1|AAC39118.1| 785|Caenorhabditis elegans high-affinity
peptide transporter protein.
Length = 785
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 128 KVRECVVTSIDHIYDDPPTEDKHYITFKPYDPDIHEKAKDIMLTAFKPTEGATQGMSWVQ 187
KV V+T +++ D P + K Y+ D+H+ +K +TAF G T ++
Sbjct: 554 KVESDVITDNNNVCD-PTAKGKFYVLSNANPLDVHDFSKKSTVTAF----GRTYSPIEMK 608
Query: 188 QGCYQPFSKEET 199
G Y+ F +++
Sbjct: 609 PGTYRLFYTDDS 620
>AC024791-31|AAF60655.1| 181|Caenorhabditis elegans Hypothetical
protein Y47G6A.3 protein.
Length = 181
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 74 LSLREVFPMWDKKRDHVWQILKYLHIIFDNLSIKVPANTE 113
+SL P D +W++LK +FDN + +P E
Sbjct: 78 MSLSRTIPRGTSMLDDIWKLLKEPSALFDNANDLLPGQKE 117
>Z72511-4|CAA96660.1| 395|Caenorhabditis elegans Hypothetical
protein F55A11.7 protein.
Length = 395
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 124 FFMQKVRECVVTSIDHIYDDPPTEDKHY--ITFKPYDPDIHEKAKDIM 169
FF+ V C+ T I P + Y IT PYDPD+ K K+++
Sbjct: 274 FFVLFVGACIFTINHTIVTRLPRFRRRYGNITVVPYDPDVRSK-KEVL 320
>Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical
protein T28B8.3a protein.
Length = 1838
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/47 (25%), Positives = 22/47 (46%)
Query: 108 VPANTEAACMYKTNRKFFMQKVRECVVTSIDHIYDDPPTEDKHYITF 154
+PA + +C+ + KFF +++ + D TE HY+ F
Sbjct: 799 IPAKADISCVERIANKFFFPYIQKLMTEVQDRDSFRRITEHLHYVVF 845
>AL590342-2|CAC35859.3| 685|Caenorhabditis elegans Hypothetical
protein Y66A7A.5 protein.
Length = 685
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 154 FKPYDPDIHEKAKDIMLTAFKPTEGATQGMSWVQQGCYQPFSKEET 199
F+P +P+ + D L +P +G + M +GC+ F +EE+
Sbjct: 248 FEPPEPEPEPEQVDTELVKLEPIDGDYEHM----EGCFSGFEQEES 289
>AL032622-4|CAA21499.1| 738|Caenorhabditis elegans Y66A7A.5
protein.
Length = 738
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 154 FKPYDPDIHEKAKDIMLTAFKPTEGATQGMSWVQQGCYQPFSKEET 199
F+P +P+ + D L +P +G + M +GC+ F +EE+
Sbjct: 248 FEPPEPEPEPEQVDTELVKLEPIDGDYEHM----EGCFSGFEQEES 289
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.322 0.138 0.434
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,525,300
Number of Sequences: 27539
Number of extensions: 243852
Number of successful extensions: 493
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 473
Number of HSP's gapped (non-prelim): 24
length of query: 201
length of database: 12,573,161
effective HSP length: 78
effective length of query: 123
effective length of database: 10,425,119
effective search space: 1282289637
effective search space used: 1282289637
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 57 (27.1 bits)
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