Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001343-TA|BGIBMGA001343-PA|IPR000608|Ubiquitin-
conjugating enzyme, E2
(201 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0260 - 32717142-32717270,32717743-32717831,32717950-327180... 65 4e-11
07_01_0481 - 3621798-3621926,3622572-3622660,3622780-3622933,362... 52 4e-07
10_08_0197 + 15666873-15666916,15667098-15667177,15667490-156676... 47 1e-05
01_01_1187 + 9444742-9445317 46 2e-05
08_02_0468 - 17505905-17506002,17506295-17506424,17506662-175067... 45 4e-05
10_02_0151 + 5895708-5895736,5896291-5896403,5897956-5898064,589... 44 6e-05
01_06_0222 - 27662122-27662159,27662251-27662341,27662760-276628... 44 8e-05
09_02_0429 + 9306862-9306970,9307834-9307942,9308538-9308616,930... 43 2e-04
01_06_0129 - 26770543-26770720,26774592-26774719,26774829-267749... 41 6e-04
09_02_0285 + 6894899-6895114,6896197-6896422,6896889-6896992,689... 40 0.002
06_03_0198 - 17797574-17797717,17797995-17798099,17798509-177986... 40 0.002
01_06_1150 + 34910941-34911010,34911611-34911738,34912025-349121... 40 0.002
01_07_0028 - 40588611-40588718,40588812-40588901,40589966-405901... 39 0.003
02_02_0339 + 9115297-9115366,9116280-9116407,9117537-9117641,911... 38 0.004
01_05_0633 + 23840427-23840562,23840699-23840768,23840846-238409... 38 0.004
01_06_1289 - 36010924-36011001,36011441-36011518,36012321-360124... 38 0.007
05_05_0110 + 22470869-22470920,22471044-22471146,22473261-224733... 36 0.017
02_01_0154 + 1078561-1078630,1078758-1078885,1079016-1079120,107... 36 0.017
02_05_0558 - 29950120-29950319,29951213-29951579,29952067-29952372 34 0.068
04_04_1506 + 34051227-34051310,34051475-34051903,34052734-34053357 33 0.21
06_03_1005 + 26837047-26837093,26837644-26837731,26837854-268379... 32 0.28
05_01_0561 + 4905107-4905272,4905945-4906033,4906832-4906960 30 1.5
12_02_1249 - 27331801-27331896,27331984-27332072,27334020-273340... 29 2.6
06_03_1382 - 29758759-29758806,29758888-29758943,29759901-297600... 28 4.5
03_02_0755 + 10932897-10933010,10933446-10933577,10933666-109337... 28 4.5
>03_06_0260 -
32717142-32717270,32717743-32717831,32717950-32718039,
32721571-32721596,32721772-32721896
Length = 152
Score = 64.9 bits (151), Expect = 4e-11
Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 4/136 (2%)
Query: 2 LQTENLRGIYVIPSYESSFLWYGVIFVRSGL-YEGGVFRFTITLPEKFPDDETPVLTFVS 60
LQ + GI P + LW VIF ++GG F+ T+ E +P+ + PV+ FVS
Sbjct: 16 LQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPN-KPPVVRFVS 74
Query: 61 NLYHPAIDASTGLLSLREVFPMWDKKRDHVWQILKYLHIIFDNLSIKVPANTEAACMYKT 120
++HP I A G + L + W D V IL + + + + PAN+EAA ++
Sbjct: 75 RMFHPNIYAD-GSICLDILQNQWSPIYD-VAAILTSIQSLLCDPNPNSPANSEAARLFSE 132
Query: 121 NRKFFMQKVRECVVTS 136
N++ + +KVRE V S
Sbjct: 133 NKREYNRKVREIVEQS 148
>07_01_0481 -
3621798-3621926,3622572-3622660,3622780-3622933,
3624104-3624111,3625522-3625547,3625757-3625881
Length = 176
Score = 51.6 bits (118), Expect = 4e-07
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 36 GVFRFTITLPEKFPDDETPVLTFVSNLYHPAIDASTGLLSLREVFPMWDKKRDHVWQILK 95
G F+ T+ E +P+ + P + FVS ++HP I A G + L + W D V IL
Sbjct: 75 GTFKLTLQFTEDYPN-KPPTVRFVSRMFHPNIYAD-GSICLDILQNQWSPIYD-VAAILT 131
Query: 96 YLHIIFDNLSIKVPANTEAACMYKTNRKFFMQKVRECVVTS 136
+ + + + PAN+EAA ++ N++ + +KVRE V S
Sbjct: 132 SIQSLLCDPNPNSPANSEAARLFSENKREYNRKVREIVEQS 172
>10_08_0197 +
15666873-15666916,15667098-15667177,15667490-15667604,
15667698-15667786,15667850-15667978,15670362-15670492
Length = 195
Score = 46.8 bits (106), Expect = 1e-05
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 13/112 (11%)
Query: 32 LYEGGVFRFTITLPEKFPDDETPVLTFVSNLYHPAIDASTGLLSLREVFPMWDKKRDHVW 91
+Y+GGV++ + LP+ +P ++P + FV+ +YHP +D +G + L + W +
Sbjct: 43 IYQGGVWKVRVELPDAYPY-KSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFGEIT 101
Query: 92 QILKYLHIIFDNL------------SIKVPANTEAACMYKTNRKFFMQKVRE 131
+L + N+ + P N EAA + +R + QKV+E
Sbjct: 102 LVLVIISTDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQKVKE 153
>01_01_1187 + 9444742-9445317
Length = 191
Score = 46.0 bits (104), Expect = 2e-05
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 4/117 (3%)
Query: 9 GIYVIPSYESSFLWYGVIFVRSGL-YEGGVFRFTITLPEKFPDDETPVLTFVSNLYHPAI 67
G+ P ++ F W G I + YEG +R ++ P ++P + P + F + +HP +
Sbjct: 66 GVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYP-YKPPKVRFETPCFHPNV 124
Query: 68 DASTGLLSLREVFPMWDKKRDHVWQILKYLHIIFDNLSIKVPANTEAACMYKTNRKF 124
DA G + L + W D V IL + + + P NT+AA ++ +F
Sbjct: 125 DAH-GNICLDILQDKWSSAYD-VRTILLSIQSLLGEPNNDSPLNTQAAALWPNQDEF 179
>08_02_0468 -
17505905-17506002,17506295-17506424,17506662-17506778,
17506881-17506959,17507546-17507654,17507857-17507969,
17510510-17510570,17511562-17511742,17512903-17512960,
17514292-17514497,17514582-17514671,17514752-17514813,
17514911-17514979,17515330-17515334,17516282-17516454
Length = 516
Score = 45.2 bits (102), Expect = 4e-05
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 31 GLYEGGVFRFTITLPEKFPDDETPVLTFVSNLYHPAIDASTGLLSLREVFPMWDKKRDHV 90
G Y GG F FT +P +P E P + + +YHP ID G + L + W K +V
Sbjct: 373 GYYVGGKFIFTFQVPPAYP-HEPPKVKCKTKVYHPNIDLE-GNVCLNILREDW-KPVLNV 429
Query: 91 WQILKYLHIIFDNLSIKVPANTEAACMYKTNRKFFMQKVRECV 133
I+ L+++F + + P N EAA + + N + F + V+ +
Sbjct: 430 NTIVYGLNLLFSQPNDEDPLNHEAAAVLRDNPEKFERNVQRAM 472
>10_02_0151 +
5895708-5895736,5896291-5896403,5897956-5898064,
5898580-5898658,5898747-5898863,5900001-5900138
Length = 194
Score = 44.4 bits (100), Expect = 6e-05
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 31 GLYEGGVFRFTITLPEKFPDDETPVLTFVSNLYHPAIDASTGLLSLREVFPMWDKKRDHV 90
G Y GG F FT + +P E P + + +YHP ID G + L + W K ++
Sbjct: 81 GYYLGGTFVFTFQVSPSYPH-EPPKVKCKTKVYHPNIDLE-GNVCLNILREDW-KPVLNI 137
Query: 91 WQILKYLHIIFDNLSIKVPANTEAACMYKTNRKFFMQKVRECV 133
++ L+++F + + P N EAA + + N K F V+ +
Sbjct: 138 NTVIYGLNLLFTQPNDEDPLNHEAAAVLRDNPKLFEANVKRAM 180
>01_06_0222 -
27662122-27662159,27662251-27662341,27662760-27662801,
27663591-27663649,27664300-27664386,27664501-27664528,
27664683-27664718
Length = 126
Score = 44.0 bits (99), Expect = 8e-05
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 2 LQTENLRGIYVIPSYESSFLWYGVIFV--RSGLYEGGVFRFTITLPEKFPDDETPVLTFV 59
L +E GI PS E + ++ V+ + YEGGVF+ + LPE++P P + F+
Sbjct: 17 LLSEPAPGISASPS-EENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYP-MAAPKVRFL 74
Query: 60 SNLYHPAID 68
+ +YHP ID
Sbjct: 75 TKIYHPNID 83
>09_02_0429 +
9306862-9306970,9307834-9307942,9308538-9308616,
9308806-9308922,9309185-9309314,9311071-9311111
Length = 194
Score = 42.7 bits (96), Expect = 2e-04
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 31 GLYEGGVFRFTITLPEKFPDDETPVLTFVSNLYHPAIDASTGLLSLREVFPMWDKKRDHV 90
G Y GG F FT+ +P +P E P + + +YHP ID G + L + W K ++
Sbjct: 70 GYYVGGAFVFTLQVPPTYP-HEPPKVKCTTKVYHPNIDLD-GNVCLNILREDW-KPVLNI 126
Query: 91 WQILKYLHIIFDNLSIKVPANTEAACMYKTNRKFFMQKVR 130
I+ L+++F + + P N +AA + + + + F + V+
Sbjct: 127 NTIVYGLNLLFIQPNDEDPLNHDAAAVLRDDPQKFRRNVQ 166
>01_06_0129 -
26770543-26770720,26774592-26774719,26774829-26774933,
26775661-26775788,26777332-26777433,26778760-26778861,
26779777-26779852,26779971-26780059,26780177-26780230,
26780482-26780614,26780671-26780797,26781590-26781648
Length = 426
Score = 41.1 bits (92), Expect = 6e-04
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 4/118 (3%)
Query: 14 PSYESSFLWYGVIFVRSGL-YEGGVFRFTITLPEKFPDDETPVLTFVSNLYHPAIDASTG 72
P E F W I S Y GGVF TI P +P + P + F + ++HP I+ S G
Sbjct: 249 PVGEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYP-FKPPKVAFRTKVFHPNIN-SNG 306
Query: 73 LLSLREVFPMWDKKRDHVWQILKYLHIIFDNLSIKVPANTEAACMYKTNRKFFMQKVR 130
+ L + W + ++L + + + + P E A MYKT+R + R
Sbjct: 307 SICLDILKDQWSPALT-ISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRHKYENTAR 363
>09_02_0285 +
6894899-6895114,6896197-6896422,6896889-6896992,
6897121-6897239,6897445-6897634
Length = 284
Score = 39.5 bits (88), Expect = 0.002
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 4/118 (3%)
Query: 14 PSYESSFLWYGVIFVRSGL-YEGGVFRFTITLPEKFPDDETPVLTFVSNLYHPAIDASTG 72
P+ E F W I S Y GGVF I P +P + P + F + +YHP I+ S G
Sbjct: 25 PAGEDLFHWQATIMGPSDSPYAGGVFFVNIHFPPDYP-FKPPKVNFQTKVYHPNIN-SNG 82
Query: 73 LLSLREVFPMWDKKRDHVWQILKYLHIIFDNLSIKVPANTEAACMYKTNRKFFMQKVR 130
+ L + W + ++L + + + + P E A +YK+ R + + R
Sbjct: 83 SICLDILKEQWSPALT-ISKVLLSISSLLTDPNPDDPLVPEIAHVYKSQRPRYEETAR 139
>06_03_0198 -
17797574-17797717,17797995-17798099,17798509-17798636,
17799444-17799513
Length = 148
Score = 39.5 bits (88), Expect = 0.002
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 4/118 (3%)
Query: 14 PSYESSFLWYGVIF-VRSGLYEGGVFRFTITLPEKFPDDETPVLTFVSNLYHPAIDASTG 72
P E F W I Y GGVF +I P +P + P + F + ++HP I+ S G
Sbjct: 25 PVGEDMFHWQATIMGPADSPYAGGVFLVSIHFPPDYP-FKPPKVAFKTKVFHPNIN-SNG 82
Query: 73 LLSLREVFPMWDKKRDHVWQILKYLHIIFDNLSIKVPANTEAACMYKTNRKFFMQKVR 130
+ L + W V ++L + + + + P E A MYKT+R + R
Sbjct: 83 SICLDILKEQWSPALT-VSKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTAR 139
>01_06_1150 +
34910941-34911010,34911611-34911738,34912025-34912129,
34912525-34912668
Length = 148
Score = 39.5 bits (88), Expect = 0.002
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
Query: 14 PSYESSFLWYGVIF-VRSGLYEGGVFRFTITLPEKFPDDETPVLTFVSNLYHPAIDASTG 72
P+ E F W I Y GGVF I P +P + P ++F + ++HP I+ S G
Sbjct: 25 PAGEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYP-FKPPKVSFKTKVFHPNIN-SNG 82
Query: 73 LLSLREVFPMWDKKRDHVWQILKYLHIIFDNLSIKVPANTEAACMYKTNR 122
+ L + W + ++L + + + + P E A MYKT+R
Sbjct: 83 SICLDILKEQWSPALT-ISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR 131
>01_07_0028 -
40588611-40588718,40588812-40588901,40589966-40590125,
40590547-40590595,40591158-40591338
Length = 195
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 33 YEGGVFRFTITLPEKFPDDETPVLTFVSNLYHPAIDASTGLLSLREVFPMW 83
YEGG F I LP +P E P + F++ ++HP I + G + L + W
Sbjct: 48 YEGGTFVIDIRLPGGYPF-EPPKMQFITKVWHPNISSQNGAICLDILKDQW 97
>02_02_0339 +
9115297-9115366,9116280-9116407,9117537-9117641,
9118165-9118259,9119472-9119538,9119685-9119720
Length = 166
Score = 38.3 bits (85), Expect = 0.004
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 4/110 (3%)
Query: 14 PSYESSFLWYGVIFVRSGL-YEGGVFRFTITLPEKFPDDETPVLTFVSNLYHPAIDASTG 72
P E F W + S Y GGVF TI P +P + P + + ++HP I+ S G
Sbjct: 25 PVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDYP-FKPPKVALKTKVFHPNIN-SNG 82
Query: 73 LLSLREVFPMWDKKRDHVWQILKYLHIIFDNLSIKVPANTEAACMYKTNR 122
+ L + W + ++L + + + + P E A MYKT+R
Sbjct: 83 SICLDILKEQWSPALT-ISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR 131
>01_05_0633 +
23840427-23840562,23840699-23840768,23840846-23840951,
23841086-23841184,23841320-23841442,23841555-23842691
Length = 556
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 32 LYEGGVFRFTITLPEKFPDDETPVLTFVSNLYHPAID 68
+Y GVF I +PE++P + P +TFV+ +YHP ID
Sbjct: 54 VYSKGVFVLKIQIPERYPF-QPPNVTFVTPIYHPNID 89
>01_06_1289 -
36010924-36011001,36011441-36011518,36012321-36012421,
36012506-36012603,36016213-36016315,36016435-36016486
Length = 169
Score = 37.5 bits (83), Expect = 0.007
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 32 LYEGGVFRFTITLPEKFPDDETPVLTFVSNLYHPAIDASTGLLSLREVFPMWDKKRDHV- 90
LY+GG F ++ P+ +P + P + F S ++HP + G + + + P D +
Sbjct: 51 LYDGGYFNAIMSFPQNYP-NSPPTVRFTSEMWHPNV-YPDGRVCISILHPPGDDPNGYEL 108
Query: 91 ----WQILKYLH-IIFDNLSI------KVPANTEAACMYKTNRKFFMQKVRECV 133
W + + I+ +S+ + PAN EAA ++ R F +KVR V
Sbjct: 109 ASERWTPVHTVESIVLSIISMLSGPNDESPANIEAAKEWREKRDDFKKKVRRLV 162
>05_05_0110 +
22470869-22470920,22471044-22471146,22473261-22473358,
22473430-22473530,22474052-22474129,22474578-22474655
Length = 169
Score = 36.3 bits (80), Expect = 0.017
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 32 LYEGGVFRFTITLPEKFPDDETPVLTFVSNLYHPAIDASTGLLSLREVFPMWDKKRDHV- 90
LY+GG F +T P+ +P + P + F S ++HP + G + + + P + +
Sbjct: 51 LYDGGYFNAIMTFPQNYP-NSPPSVRFTSEMWHPNV-YPDGRVCISILHPPGEDPNGYEL 108
Query: 91 ----WQILKYLH-IIFDNLSI------KVPANTEAACMYKTNRKFFMQKVRECV 133
W + + I+ +S+ + PAN EAA ++ R F +KVR V
Sbjct: 109 ASERWTPVHTVESIVLSIISMLSSPNDESPANIEAAKDWREKRDDFKKKVRRIV 162
>02_01_0154 +
1078561-1078630,1078758-1078885,1079016-1079120,
1079228-1079371
Length = 148
Score = 36.3 bits (80), Expect = 0.017
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
Query: 14 PSYESSFLWYGVIF-VRSGLYEGGVFRFTITLPEKFPDDETPVLTFVSNLYHPAIDASTG 72
P + F W I Y GGVF TI P +P + P + F + ++HP I+ S G
Sbjct: 25 PVSDDMFHWQATIMGPNDSPYSGGVFLVTIHFPPDYP-FKPPKVAFKTKVFHPNIN-SNG 82
Query: 73 LLSLREVFPMWDKKRDHVWQILKYLHIIFDNLSIKVPANTEAACMYKTNR 122
+ L + W + ++L + + + + P E A M KT+R
Sbjct: 83 NICLDILKDQWSPALT-ISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDR 131
>02_05_0558 - 29950120-29950319,29951213-29951579,29952067-29952372
Length = 290
Score = 34.3 bits (75), Expect = 0.068
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Query: 20 FLWYGVIFVRSGL-YEGGVFRFTITLPEKFPDDETPVLTFVSNLYHPAIDASTGLLSLRE 78
F W VI +G Y GG F I LP P +TF + +YHP ID ++ E
Sbjct: 60 FHWEVVIDGPAGTPYAGGTFPVDIQLPAAGYPFVHPKVTFKTLVYHPNIDEEGNMVLDAE 119
Query: 79 VFPMWDKKRDHVWQILKYLHIIFDNLSIKVPANTEAACMY 118
+ K R ++ ++ +++D L + P N + A Y
Sbjct: 120 SWSCATKLRG---LLIGFVSVLYDPL-LDYPINYDIAEQY 155
>04_04_1506 + 34051227-34051310,34051475-34051903,34052734-34053357
Length = 378
Score = 32.7 bits (71), Expect = 0.21
Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
Query: 9 GIYVIPSYESSFLWYGVIFVRSGLYEGGVFRFTITLPEKFPD---DETPVLTFVSNLYHP 65
G + +P Y ++ +G GL+E IT P D D V +V +L P
Sbjct: 274 GSFNVPVYAATLEEFGEAVGADGLFEINRLELVITSPLAVDDPIRDRRAVANYVRSLLGP 333
Query: 66 AIDASTGLLSLREVFPMWDKKRD 88
+DA G E+F ++ +
Sbjct: 334 LVDAHVGRAVADEIFVRMQRRAE 356
>06_03_1005 +
26837047-26837093,26837644-26837731,26837854-26837998,
26838150-26838227,26838323-26838435,26838538-26838641,
26838804-26839119
Length = 296
Score = 32.3 bits (70), Expect = 0.28
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 33 YEGGVFRFTITLPEKFPDDETPVLTFVSNLYHPAIDASTGLLSLREVFPMWD 84
YE GVFR + L FP P F++ ++HP I A++G + + + W+
Sbjct: 98 YENGVFRMKLLLSRDFP-QSPPKGFFLTKIFHPNI-ATSGEICVNTLKKDWN 147
>05_01_0561 + 4905107-4905272,4905945-4906033,4906832-4906960
Length = 127
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 109 PANTEAACMYKTNRKFFMQKVRECVVTS 136
PAN+EAA ++ N++ + +KVRE V S
Sbjct: 96 PANSEAARLFSENKREYNRKVREIVEQS 123
>12_02_1249 -
27331801-27331896,27331984-27332072,27334020-27334083,
27334208-27334336,27334554-27334607,27334712-27334741
Length = 153
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 15 SYESSFLWYGVIFVRSG-LYEGGVFRFTITLPEKFPDDETPVLTFVSNLYHPAIDASTGL 73
SY+S W + +G LY G ++ + PE +P + V+ HP I S G
Sbjct: 31 SYDSPNRWVIEVTGAAGTLYAGETYQLQVDFPEHYPMEAPQVIFLNPAPMHPHI-YSNGH 89
Query: 74 LSLREVFPMW 83
+ L ++ W
Sbjct: 90 ICLDILYDSW 99
>06_03_1382 -
29758759-29758806,29758888-29758943,29759901-29760000,
29760107-29760220,29760807-29760854,29760959-29761021,
29761237-29761439,29761518-29761578,29761685-29761790,
29761920-29761987,29762344-29762418,29762507-29762589,
29762788-29762953
Length = 396
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 44 LPEKFPDDETPVLTFVSNLYHPAIDASTGLLSLRE 78
LP +FPD TPV VS +Y + D+ G+ SL +
Sbjct: 201 LPLEFPDGTTPVTCRVS-IYDSSTDSKVGVGSLMD 234
>03_02_0755 +
10932897-10933010,10933446-10933577,10933666-10933750,
10934668-10934831,10934911-10935357
Length = 313
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 13 IPSYESSFLW-YGVIFVRSGLYEGGVFRFTITLPEKFP 49
+P E F W + ++ R +EGG++ I LP +P
Sbjct: 35 MPLEEDIFEWQFAILGPRDSEFEGGIYHGRIQLPSDYP 72
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.322 0.138 0.434
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,276,205
Number of Sequences: 37544
Number of extensions: 261208
Number of successful extensions: 541
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 526
Number of HSP's gapped (non-prelim): 27
length of query: 201
length of database: 14,793,348
effective HSP length: 79
effective length of query: 122
effective length of database: 11,827,372
effective search space: 1442939384
effective search space used: 1442939384
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 58 (27.5 bits)
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