Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001342-TA|BGIBMGA001342-PA|IPR003417|Core binding
factor, beta subunit
(230 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF294326-1|AAG01553.1| 187|Homo sapiens core binding factor bet... 188 1e-47
BT006862-1|AAP35508.1| 182|Homo sapiens core-binding factor, be... 188 2e-47
BC018509-1|AAH18509.1| 182|Homo sapiens core-binding factor, be... 188 2e-47
L20298-1|AAA02868.1| 175|Homo sapiens transcription factor prot... 172 7e-43
U00802-1|AAA16256.1| 649|Homo sapiens drebrin E2 protein. 36 0.16
D17530-1|BAA04480.1| 649|Homo sapiens drebrin E protein. 36 0.16
BC007567-1|AAH07567.1| 649|Homo sapiens drebrin 1 protein. 36 0.16
BC007281-1|AAH07281.1| 649|Homo sapiens drebrin 1 protein. 36 0.16
BC000283-1|AAH00283.1| 649|Homo sapiens drebrin 1 protein. 36 0.16
AL110225-1|CAB53683.1| 651|Homo sapiens hypothetical protein pr... 36 0.16
BX640737-1|CAE45850.1| 1399|Homo sapiens hypothetical protein pr... 32 1.5
BX537983-1|CAD97943.1| 1071|Homo sapiens hypothetical protein pr... 32 1.5
AL080120-1|CAB45719.1| 184|Homo sapiens hypothetical protein pr... 32 1.5
AB037723-1|BAA92540.3| 2016|Homo sapiens KIAA1302 protein protein. 32 1.5
AJ276680-1|CAB77544.1| 170|Homo sapiens putative Liprin related... 32 1.9
AB049149-1|BAB39690.1| 170|Homo sapiens hSgt2p protein. 32 1.9
AL445197-4|CAI15942.1| 166|Homo sapiens discoidin domain recept... 31 2.5
AK056531-1|BAB71206.1| 730|Homo sapiens protein ( Homo sapiens ... 31 4.4
DQ355971-1|ABC67469.1| 1711|Homo sapiens CDC42 binding protein k... 30 5.9
BC047871-1|AAH47871.1| 933|Homo sapiens CDC42BPB protein protein. 30 5.9
AF128625-1|AAD37506.1| 1711|Homo sapiens CDC42-binding protein k... 30 5.9
AB032950-1|BAA86438.2| 1760|Homo sapiens KIAA1124 protein protein. 30 5.9
BX537964-1|CAD97928.1| 898|Homo sapiens hypothetical protein pr... 30 7.7
BC105632-1|AAI05633.1| 898|Homo sapiens chromosome 10 open read... 30 7.7
BC103499-1|AAI03500.1| 898|Homo sapiens chromosome 10 open read... 30 7.7
BC100670-1|AAI00671.1| 1004|Homo sapiens C10orf118 protein protein. 30 7.7
AF273054-1|AAM44457.1| 613|Homo sapiens CTCL tumor antigen HD-C... 30 7.7
>AF294326-1|AAG01553.1| 187|Homo sapiens core binding factor beta
isoform PEBP2B protein.
Length = 187
Score = 188 bits (459), Expect = 1e-47
Identities = 87/168 (51%), Positives = 117/168 (69%), Gaps = 8/168 (4%)
Query: 28 MPRVVPDQKAKFESDDLFKRLSRESEVRYTGYRDRPPEERQMRFMSGCREGHTEIAFTGT 87
MPRVVPDQ++KFE+++ F++LSRE E++YTG+RDRP EERQ RF + CR+G +EIAF T
Sbjct: 1 MPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEIAFVAT 60
Query: 88 GTNLQLVFDHSPY--------NNRGCDFQKENGKAHIVSRFIMNGVCVRWRGWIDLERLD 139
GTNL L F + + + D ++E GK ++ + I+NGVCV W+GWIDL+RLD
Sbjct: 61 GTNLSLQFFPASWQGEQRQTPSREYVDLEREAGKVYLKAPMILNGVCVIWKGWIDLQRLD 120
Query: 140 GAGCLELDEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGEELR 187
G GCLE DEERA EDA + E +R R+FED+ R++RE E R
Sbjct: 121 GMGCLEFDEERAQQEDALAQQAFEEARRRTREFEDRDRSHREEMEARR 168
>BT006862-1|AAP35508.1| 182|Homo sapiens core-binding factor, beta
subunit protein.
Length = 182
Score = 188 bits (457), Expect = 2e-47
Identities = 86/165 (52%), Positives = 116/165 (70%), Gaps = 8/165 (4%)
Query: 28 MPRVVPDQKAKFESDDLFKRLSRESEVRYTGYRDRPPEERQMRFMSGCREGHTEIAFTGT 87
MPRVVPDQ++KFE+++ F++LSRE E++YTG+RDRP EERQ RF + CR+G +EIAF T
Sbjct: 1 MPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEIAFVAT 60
Query: 88 GTNLQLVFDHSPY--------NNRGCDFQKENGKAHIVSRFIMNGVCVRWRGWIDLERLD 139
GTNL L F + + + D ++E GK ++ + I+NGVCV W+GWIDL+RLD
Sbjct: 61 GTNLSLQFFPASWQGEQRQTPSREYVDLEREAGKVYLKAPMILNGVCVIWKGWIDLQRLD 120
Query: 140 GAGCLELDEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGE 184
G GCLE DEERA EDA + E +R R+FED+ R++RE E
Sbjct: 121 GMGCLEFDEERAQQEDALAQQAFEEARRRTREFEDRDRSHREEME 165
>BC018509-1|AAH18509.1| 182|Homo sapiens core-binding factor, beta
subunit protein.
Length = 182
Score = 188 bits (457), Expect = 2e-47
Identities = 86/165 (52%), Positives = 116/165 (70%), Gaps = 8/165 (4%)
Query: 28 MPRVVPDQKAKFESDDLFKRLSRESEVRYTGYRDRPPEERQMRFMSGCREGHTEIAFTGT 87
MPRVVPDQ++KFE+++ F++LSRE E++YTG+RDRP EERQ RF + CR+G +EIAF T
Sbjct: 1 MPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEIAFVAT 60
Query: 88 GTNLQLVFDHSPY--------NNRGCDFQKENGKAHIVSRFIMNGVCVRWRGWIDLERLD 139
GTNL L F + + + D ++E GK ++ + I+NGVCV W+GWIDL+RLD
Sbjct: 61 GTNLSLQFFPASWQGEQRQTPSREYVDLEREAGKVYLKAPMILNGVCVIWKGWIDLQRLD 120
Query: 140 GAGCLELDEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGE 184
G GCLE DEERA EDA + E +R R+FED+ R++RE E
Sbjct: 121 GMGCLEFDEERAQQEDALAQQAFEEARRRTREFEDRDRSHREEME 165
>L20298-1|AAA02868.1| 175|Homo sapiens transcription factor
protein.
Length = 175
Score = 172 bits (419), Expect = 7e-43
Identities = 79/158 (50%), Positives = 108/158 (68%), Gaps = 8/158 (5%)
Query: 35 QKAKFESDDLFKRLSRESEVRYTGYRDRPPEERQMRFMSGCREGHTEIAFTGTGTNLQLV 94
Q++KFE+++ F++LSRE E++YTG+RDRP EERQ RF + CR+G +EIAF TGTNL L
Sbjct: 1 QRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEIAFVATGTNLSLQ 60
Query: 95 FDHSPYNNRG--------CDFQKENGKAHIVSRFIMNGVCVRWRGWIDLERLDGAGCLEL 146
F + + D ++E GK ++ + I+NGVCV W+GWIDL+RLDG GCLE
Sbjct: 61 FFPASWQGEQRQTPSREYVDLEREAGKVYLKAPMILNGVCVIWKGWIDLQRLDGMGCLEF 120
Query: 147 DEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGE 184
DEERA EDA + E +R R+FED+ R++RE E
Sbjct: 121 DEERAQQEDALAQQAFEEARRRTREFEDRDRSHREEME 158
>U00802-1|AAA16256.1| 649|Homo sapiens drebrin E2 protein.
Length = 649
Score = 35.5 bits (78), Expect = 0.16
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 144 LELDEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGEELRSH 189
L +EER D LR + ER Q ++ E+++R YRE +++ H
Sbjct: 190 LRKEEERKKALDERLRFEQERMEQERQEQEERERRYREREQQIEEH 235
>D17530-1|BAA04480.1| 649|Homo sapiens drebrin E protein.
Length = 649
Score = 35.5 bits (78), Expect = 0.16
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 144 LELDEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGEELRSH 189
L +EER D LR + ER Q ++ E+++R YRE +++ H
Sbjct: 190 LRKEEERKKALDERLRFEQERMEQERQEQEERERRYREREQQIEEH 235
>BC007567-1|AAH07567.1| 649|Homo sapiens drebrin 1 protein.
Length = 649
Score = 35.5 bits (78), Expect = 0.16
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 144 LELDEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGEELRSH 189
L +EER D LR + ER Q ++ E+++R YRE +++ H
Sbjct: 190 LRKEEERKKALDERLRFEQERMEQERQEQEERERRYREREQQIEEH 235
>BC007281-1|AAH07281.1| 649|Homo sapiens drebrin 1 protein.
Length = 649
Score = 35.5 bits (78), Expect = 0.16
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 144 LELDEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGEELRSH 189
L +EER D LR + ER Q ++ E+++R YRE +++ H
Sbjct: 190 LRKEEERKKALDERLRFEQERMEQERQEQEERERRYREREQQIEEH 235
>BC000283-1|AAH00283.1| 649|Homo sapiens drebrin 1 protein.
Length = 649
Score = 35.5 bits (78), Expect = 0.16
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 144 LELDEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGEELRSH 189
L +EER D LR + ER Q ++ E+++R YRE +++ H
Sbjct: 190 LRKEEERKKALDERLRFEQERMEQERQEQEERERRYREREQQIEEH 235
>AL110225-1|CAB53683.1| 651|Homo sapiens hypothetical protein
protein.
Length = 651
Score = 35.5 bits (78), Expect = 0.16
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 144 LELDEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGEELRSH 189
L +EER D LR + ER Q ++ E+++R YRE +++ H
Sbjct: 192 LRKEEERKKALDERLRFEQERMEQERQEQEERERRYREREQQIEEH 237
>BX640737-1|CAE45850.1| 1399|Homo sapiens hypothetical protein
protein.
Length = 1399
Score = 32.3 bits (70), Expect = 1.5
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 16/88 (18%)
Query: 110 ENGKAHIVSRF--IMNGVCVRWRGWIDLERLDGAGCLE------LDEERAAI----EDAA 157
ENG VS+ ++NG R R + D++ GA CL LDEE+A + A
Sbjct: 1272 ENGVNVTVSQINTVLNG---RTRRYTDIQLQYGALCLNTRYGTTLDEEKARVLELARQRA 1328
Query: 158 LRDQIERYNQRLRDFEDKQRAYREHGEE 185
+R R QRLR+ E+ RA+ E GE+
Sbjct: 1329 VRQAWAREQQRLREGEEGLRAWTE-GEK 1355
>BX537983-1|CAD97943.1| 1071|Homo sapiens hypothetical protein
protein.
Length = 1071
Score = 32.3 bits (70), Expect = 1.5
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 16/88 (18%)
Query: 110 ENGKAHIVSRF--IMNGVCVRWRGWIDLERLDGAGCLE------LDEERAAI----EDAA 157
ENG VS+ ++NG R R + D++ GA CL LDEE+A + A
Sbjct: 944 ENGVNVTVSQINTVLNG---RTRRYTDIQLQYGALCLNTRYGTTLDEEKARVLELARQRA 1000
Query: 158 LRDQIERYNQRLRDFEDKQRAYREHGEE 185
+R R QRLR+ E+ RA+ E GE+
Sbjct: 1001 VRQAWAREQQRLREGEEGLRAWTE-GEK 1027
>AL080120-1|CAB45719.1| 184|Homo sapiens hypothetical protein
protein.
Length = 184
Score = 32.3 bits (70), Expect = 1.5
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 16/88 (18%)
Query: 110 ENGKAHIVSRF--IMNGVCVRWRGWIDLERLDGAGCLE------LDEERAAI----EDAA 157
ENG VS+ ++NG R R + D++ GA CL LDEE+A + A
Sbjct: 57 ENGVNVTVSQINTVLNG---RTRRYTDIQLQYGALCLNTRYGTTLDEEKARVLELARQRA 113
Query: 158 LRDQIERYNQRLRDFEDKQRAYREHGEE 185
+R R QRLR+ E+ RA+ E GE+
Sbjct: 114 VRQAWAREQQRLREGEEGLRAWTE-GEK 140
>AB037723-1|BAA92540.3| 2016|Homo sapiens KIAA1302 protein protein.
Length = 2016
Score = 32.3 bits (70), Expect = 1.5
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 16/88 (18%)
Query: 110 ENGKAHIVSRF--IMNGVCVRWRGWIDLERLDGAGCLE------LDEERAAI----EDAA 157
ENG VS+ ++NG R R + D++ GA CL LDEE+A + A
Sbjct: 1889 ENGVNVTVSQINTVLNG---RTRRYTDIQLQYGALCLNTRYGTTLDEEKARVLELARQRA 1945
Query: 158 LRDQIERYNQRLRDFEDKQRAYREHGEE 185
+R R QRLR+ E+ RA+ E GE+
Sbjct: 1946 VRQAWAREQQRLREGEEGLRAWTE-GEK 1972
>AJ276680-1|CAB77544.1| 170|Homo sapiens putative Liprin related
protein protein.
Length = 170
Score = 31.9 bits (69), Expect = 1.9
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 144 LELDEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGEELRSHSHVHAQRC 197
LE D+E ++ + L DQ+E +++RD E EH E+L + + Q C
Sbjct: 109 LENDKESLVLQVSVLTDQVEAQGEKIRDLE---FCLEEHREKLNATEEMLQQVC 159
>AB049149-1|BAB39690.1| 170|Homo sapiens hSgt2p protein.
Length = 170
Score = 31.9 bits (69), Expect = 1.9
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 144 LELDEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGEELRSHSHVHAQRC 197
LE D+E ++ + L DQ+E +++RD E EH E+L + + Q C
Sbjct: 109 LENDKESLVLQVSVLTDQVEAQGEKIRDLE---FCLEEHREKLNATEEMLQQVC 159
>AL445197-4|CAI15942.1| 166|Homo sapiens discoidin domain receptor
family, member 2 protein.
Length = 166
Score = 31.5 bits (68), Expect = 2.5
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 10 MLPFDSIYEQPKPRFIFKMPRVVPDQKAKFESDDLFKRLSRESEVRYTGYRDRP 63
+ P Y++P R I K+P P ++ E DD+ R+SRE + +G D P
Sbjct: 84 IFPLRPDYQEPS-RLIRKLPEFAPGEEESGE-DDVVGRVSREKPQQASGRYDTP 135
>AK056531-1|BAB71206.1| 730|Homo sapiens protein ( Homo sapiens
cDNA FLJ31969 fis, clone NT2RP7008013, highly similar to
Mus musculus mRNA for Ten-m4. ).
Length = 730
Score = 30.7 bits (66), Expect = 4.4
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 110 ENGKAHIVSRFIMNGVCVRWRGWIDLERLDGAGCLE------LDEERAAI----EDAALR 159
ENG VS+ I + R R + D++ GA CL LDEE+A + A+R
Sbjct: 603 ENGVNVTVSQ-INTVLSGRTRRYTDIQLQYGALCLNTRYGTTLDEEKARVLELARQRAVR 661
Query: 160 DQIERYNQRLRDFEDKQRAYREHGEE 185
R QRLR+ E+ RA+ E GE+
Sbjct: 662 QAWAREQQRLREGEEGLRAWTE-GEK 686
>DQ355971-1|ABC67469.1| 1711|Homo sapiens CDC42 binding protein
kinase beta (DMPK-like) protein.
Length = 1711
Score = 30.3 bits (65), Expect = 5.9
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 149 ERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGEEL 186
ER + ALR + E QRLR E + R R+ EEL
Sbjct: 508 ERQLEDTVALRQEREDSTQRLRGLEKQHRVVRQEKEEL 545
>BC047871-1|AAH47871.1| 933|Homo sapiens CDC42BPB protein protein.
Length = 933
Score = 30.3 bits (65), Expect = 5.9
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 149 ERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGEEL 186
ER + ALR + E QRLR E + R R+ EEL
Sbjct: 508 ERQLEDTVALRQEREDSTQRLRGLEKQHRVVRQEKEEL 545
>AF128625-1|AAD37506.1| 1711|Homo sapiens CDC42-binding protein
kinase beta protein.
Length = 1711
Score = 30.3 bits (65), Expect = 5.9
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 149 ERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGEEL 186
ER + ALR + E QRLR E + R R+ EEL
Sbjct: 508 ERQLEDTVALRQEREDSTQRLRGLEKQHRVVRQEKEEL 545
>AB032950-1|BAA86438.2| 1760|Homo sapiens KIAA1124 protein protein.
Length = 1760
Score = 30.3 bits (65), Expect = 5.9
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 149 ERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGEEL 186
ER + ALR + E QRLR E + R R+ EEL
Sbjct: 557 ERQLEDTVALRQEREDSTQRLRGLEKQHRVVRQEKEEL 594
>BX537964-1|CAD97928.1| 898|Homo sapiens hypothetical protein
protein.
Length = 898
Score = 29.9 bits (64), Expect = 7.7
Identities = 10/29 (34%), Positives = 22/29 (75%)
Query: 160 DQIERYNQRLRDFEDKQRAYREHGEELRS 188
DQ+E ++ ++++ ED +R ++E +ELR+
Sbjct: 472 DQLEMHHAKIKELEDLKRTFKEGMDELRT 500
>BC105632-1|AAI05633.1| 898|Homo sapiens chromosome 10 open reading
frame 118 protein.
Length = 898
Score = 29.9 bits (64), Expect = 7.7
Identities = 10/29 (34%), Positives = 22/29 (75%)
Query: 160 DQIERYNQRLRDFEDKQRAYREHGEELRS 188
DQ+E ++ ++++ ED +R ++E +ELR+
Sbjct: 472 DQLEMHHAKIKELEDLKRTFKEGMDELRT 500
>BC103499-1|AAI03500.1| 898|Homo sapiens chromosome 10 open reading
frame 118 protein.
Length = 898
Score = 29.9 bits (64), Expect = 7.7
Identities = 10/29 (34%), Positives = 22/29 (75%)
Query: 160 DQIERYNQRLRDFEDKQRAYREHGEELRS 188
DQ+E ++ ++++ ED +R ++E +ELR+
Sbjct: 472 DQLEMHHAKIKELEDLKRTFKEGMDELRT 500
>BC100670-1|AAI00671.1| 1004|Homo sapiens C10orf118 protein protein.
Length = 1004
Score = 29.9 bits (64), Expect = 7.7
Identities = 10/29 (34%), Positives = 22/29 (75%)
Query: 160 DQIERYNQRLRDFEDKQRAYREHGEELRS 188
DQ+E ++ ++++ ED +R ++E +ELR+
Sbjct: 578 DQLEMHHAKIKELEDLKRTFKEGMDELRT 606
>AF273054-1|AAM44457.1| 613|Homo sapiens CTCL tumor antigen
HD-CL-01 protein.
Length = 613
Score = 29.9 bits (64), Expect = 7.7
Identities = 10/29 (34%), Positives = 22/29 (75%)
Query: 160 DQIERYNQRLRDFEDKQRAYREHGEELRS 188
DQ+E ++ ++++ ED +R ++E +ELR+
Sbjct: 289 DQLEMHHAKIKELEDLKRTFKEGMDELRT 317
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.321 0.138 0.423
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,075,081
Number of Sequences: 224733
Number of extensions: 1355379
Number of successful extensions: 3485
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3450
Number of HSP's gapped (non-prelim): 39
length of query: 230
length of database: 73,234,838
effective HSP length: 88
effective length of query: 142
effective length of database: 53,458,334
effective search space: 7591083428
effective search space used: 7591083428
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 64 (29.9 bits)
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