Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001341-TA|BGIBMGA001341-PA|undefined
         (220 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064373-1|AAH64373.1|  216|Homo sapiens similar to RIKEN cDNA C...   190   3e-48
BC064829-1|AAH64829.1|  216|Homo sapiens similar to RIKEN cDNA C...   189   8e-48
BC073936-1|AAH73936.1|  208|Homo sapiens MGC70857 protein protein.    125   1e-28

>BC064373-1|AAH64373.1|  216|Homo sapiens similar to RIKEN cDNA
           C030006K11 gene protein.
          Length = 216

 Score =  190 bits (463), Expect = 3e-48
 Identities = 86/184 (46%), Positives = 118/184 (64%), Gaps = 1/184 (0%)

Query: 20  CSQKKSLHYVQGQEPEPKIREYFYYIDHQGMLFLDDARIKNFTSCXXXXXXXXXXXXRIR 79
           CS    + Y QGQ PEP+ REYFYY+DHQG LFLDD+++KNF +C            R+R
Sbjct: 22  CSGDGGVSYTQGQSPEPRTREYFYYVDHQGQLFLDDSKMKNFITCFKDPQFLVTFFSRLR 81

Query: 80  LNKTGKYEAEFPFVSHCGRERNYIRCDDLPIVFTHIFHEDN-VDFLSYGYAGDLLRTVFI 138
            N++G+YEA FPF+S CGRERN++RC+D P+VFTH+   D+    LSY   G+ L   F 
Sbjct: 82  PNRSGRYEAAFPFLSPCGRERNFLRCEDRPVVFTHLLTADHGPPRLSYCGGGEALAVPFE 141

Query: 139 PDKVYMLPLTGRVYHVAEEKFGGVGLIKSKLAIELSKYFEFHNGDTRPPTHLTWHNKKYE 198
           P ++  L   GR+YH A E+ GGVGL++S LA ELS  FE+  G    P+H+ W  ++  
Sbjct: 142 PARLLPLAANGRLYHPAPERAGGVGLVRSALAFELSACFEYGPGAPALPSHVRWQGRRLA 201

Query: 199 LDLN 202
           L ++
Sbjct: 202 LTMD 205


>BC064829-1|AAH64829.1|  216|Homo sapiens similar to RIKEN cDNA
           C030006K11 gene protein.
          Length = 216

 Score =  189 bits (460), Expect = 8e-48
 Identities = 85/184 (46%), Positives = 118/184 (64%), Gaps = 1/184 (0%)

Query: 20  CSQKKSLHYVQGQEPEPKIREYFYYIDHQGMLFLDDARIKNFTSCXXXXXXXXXXXXRIR 79
           CS    + Y QGQ P+P+ REYFYY+DHQG LFLDD+++KNF +C            R+R
Sbjct: 22  CSGDGGVSYTQGQSPDPRTREYFYYVDHQGQLFLDDSKMKNFITCFKDPQFLVTFFSRLR 81

Query: 80  LNKTGKYEAEFPFVSHCGRERNYIRCDDLPIVFTHIFHEDN-VDFLSYGYAGDLLRTVFI 138
            N++G+YEA FPF+S CGRERN++RC+D P+VFTH+   D+    LSY   G+ L   F 
Sbjct: 82  PNRSGRYEAAFPFLSPCGRERNFLRCEDRPVVFTHLLTADHGPPRLSYCGGGEALAVPFE 141

Query: 139 PDKVYMLPLTGRVYHVAEEKFGGVGLIKSKLAIELSKYFEFHNGDTRPPTHLTWHNKKYE 198
           P ++  L   GR+YH A E+ GGVGL++S LA ELS  FE+  G    P+H+ W  ++  
Sbjct: 142 PARLLPLAANGRLYHPAPERAGGVGLVRSALAFELSACFEYGPGAPALPSHVRWQGRRLA 201

Query: 199 LDLN 202
           L ++
Sbjct: 202 LTMD 205


>BC073936-1|AAH73936.1|  208|Homo sapiens MGC70857 protein protein.
          Length = 208

 Score =  125 bits (302), Expect = 1e-28
 Identities = 58/127 (45%), Positives = 83/127 (65%), Gaps = 1/127 (0%)

Query: 77  RIRLNKTGKYEAEFPFVSHCGRERNYIRCDDLPIVFTHIFHEDN-VDFLSYGYAGDLLRT 135
           R+R N++G+YEA FPF+S CGRERN++RC+D P+VFTH+   D+    LSY   G+ L  
Sbjct: 71  RLRPNRSGRYEAAFPFLSPCGRERNFLRCEDRPVVFTHLLTADHGPPRLSYCGGGEALAV 130

Query: 136 VFIPDKVYMLPLTGRVYHVAEEKFGGVGLIKSKLAIELSKYFEFHNGDTRPPTHLTWHNK 195
            F P ++  L   GR+YH A E+ GGVGL++S LA ELS  FE+  G    P+H+ W  +
Sbjct: 131 PFEPARLLPLAANGRLYHPAPERAGGVGLVRSALAFELSACFEYGPGAPALPSHVRWQGR 190

Query: 196 KYELDLN 202
           +  L ++
Sbjct: 191 RLALTMD 197


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.324    0.142    0.445 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,162,580
Number of Sequences: 224733
Number of extensions: 1392827
Number of successful extensions: 2088
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2082
Number of HSP's gapped (non-prelim): 3
length of query: 220
length of database: 73,234,838
effective HSP length: 87
effective length of query: 133
effective length of database: 53,683,067
effective search space: 7139847911
effective search space used: 7139847911
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 63 (29.5 bits)