GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001341-TA|BGIBMGA001341-PA|undefined
         (220 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119234-1|AAM51094.1|  167|Drosophila melanogaster SD18306p pro...   184   1e-46
AE013599-953|AAM71037.1|  167|Drosophila melanogaster CG30010-PA...   184   1e-46
AE014296-1411|AAF50453.2|  345|Drosophila melanogaster CG7201-PA...    30   2.9  
BT011077-1|AAR82743.1|  719|Drosophila melanogaster SD01953p pro...    29   3.8  
AY094941-1|AAM11294.1|  720|Drosophila melanogaster RH56077p pro...    29   3.8  
AE014297-960|AAF54393.1|  720|Drosophila melanogaster CG9379-PA ...    29   3.8  

>AY119234-1|AAM51094.1|  167|Drosophila melanogaster SD18306p
           protein.
          Length = 167

 Score =  184 bits (447), Expect = 1e-46
 Identities = 84/162 (51%), Positives = 112/162 (69%), Gaps = 2/162 (1%)

Query: 50  MLFLDDARIKNFTSCXXXXXXXXXXXXRIRLNKTGKYEAEFPFVSHCGRERNYIRCDDLP 109
           MLFLDDA++KNFTSC            R+RLNKT +YE+EFP++S CGRERN+IRCDD P
Sbjct: 1   MLFLDDAKMKNFTSCFKEKDFLKFFFNRLRLNKTSRYESEFPYISLCGRERNFIRCDDTP 60

Query: 110 IVFTHIFHEDNVDFLSYGYAGDLLRTVFIPDKVYMLPLTGRVYHVAEEKFGGVGLIKSKL 169
           +VFT    +D+ + LSY +AG +L   + P K+YM P  GRVYH A  + GG+GL++SKL
Sbjct: 61  VVFTEQLRKDDTEVLSYAHAGQVLTLPYEPHKLYMDPRNGRVYHPAAPQVGGIGLVRSKL 120

Query: 170 AIELSKYFEFHNGDTRPPTHLTWHNKKYELDLNWFDENVKRF 211
           AIELS++FEF  G+   PTH  W+ ++ EL   W + N +RF
Sbjct: 121 AIELSQHFEFLAGEA-SPTHFQWNGERLELQNEWVN-NTQRF 160


>AE013599-953|AAM71037.1|  167|Drosophila melanogaster CG30010-PA
           protein.
          Length = 167

 Score =  184 bits (447), Expect = 1e-46
 Identities = 84/162 (51%), Positives = 112/162 (69%), Gaps = 2/162 (1%)

Query: 50  MLFLDDARIKNFTSCXXXXXXXXXXXXRIRLNKTGKYEAEFPFVSHCGRERNYIRCDDLP 109
           MLFLDDA++KNFTSC            R+RLNKT +YE+EFP++S CGRERN+IRCDD P
Sbjct: 1   MLFLDDAKMKNFTSCFKEKDFLKFFFNRLRLNKTSRYESEFPYISLCGRERNFIRCDDTP 60

Query: 110 IVFTHIFHEDNVDFLSYGYAGDLLRTVFIPDKVYMLPLTGRVYHVAEEKFGGVGLIKSKL 169
           +VFT    +D+ + LSY +AG +L   + P K+YM P  GRVYH A  + GG+GL++SKL
Sbjct: 61  VVFTEQLRKDDTEVLSYAHAGQVLTLPYEPHKLYMDPRNGRVYHPAAPQVGGIGLVRSKL 120

Query: 170 AIELSKYFEFHNGDTRPPTHLTWHNKKYELDLNWFDENVKRF 211
           AIELS++FEF  G+   PTH  W+ ++ EL   W + N +RF
Sbjct: 121 AIELSQHFEFLAGEA-SPTHFQWNGERLELQNEWVN-NTQRF 160


>AE014296-1411|AAF50453.2|  345|Drosophila melanogaster CG7201-PA
           protein.
          Length = 345

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)

Query: 107 DLPIVFTHIFHEDNVDFLSYGYAGDLLRTVFIPDKVYMLPLTGRVYHVAEEKFGGVGLIK 166
           +LP    HIFH      L YG   D L T  +  K  +L     ++  + EKFG  G + 
Sbjct: 192 ELPAGLQHIFHGGE-RVLLYGVVEDFLSTFGMDGKACLLRTICEMHSRSLEKFGVFGEM- 249

Query: 167 SKLAIELSK 175
           +KL + ++K
Sbjct: 250 TKLFLTVTK 258


>BT011077-1|AAR82743.1|  719|Drosophila melanogaster SD01953p
           protein.
          Length = 719

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 12/39 (30%), Positives = 22/39 (56%)

Query: 23  KKSLHYVQGQEPEPKIREYFYYIDHQGMLFLDDARIKNF 61
           +K++  + GQ+P P+  E  + +  QG+   D+ R K F
Sbjct: 600 RKAIRQMYGQQPLPQPTEVHFKVSSQGITLTDNTRKKFF 638


>AY094941-1|AAM11294.1|  720|Drosophila melanogaster RH56077p
           protein.
          Length = 720

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 12/39 (30%), Positives = 22/39 (56%)

Query: 23  KKSLHYVQGQEPEPKIREYFYYIDHQGMLFLDDARIKNF 61
           +K++  + GQ+P P+  E  + +  QG+   D+ R K F
Sbjct: 601 RKAIRQMYGQQPLPQPTEVHFKVSSQGITLTDNTRKKFF 639


>AE014297-960|AAF54393.1|  720|Drosophila melanogaster CG9379-PA
           protein.
          Length = 720

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 12/39 (30%), Positives = 22/39 (56%)

Query: 23  KKSLHYVQGQEPEPKIREYFYYIDHQGMLFLDDARIKNF 61
           +K++  + GQ+P P+  E  + +  QG+   D+ R K F
Sbjct: 601 RKAIRQMYGQQPLPQPTEVHFKVSSQGITLTDNTRKKFF 639


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.324    0.142    0.445 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,145,205
Number of Sequences: 52641
Number of extensions: 464731
Number of successful extensions: 921
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 914
Number of HSP's gapped (non-prelim): 6
length of query: 220
length of database: 24,830,863
effective HSP length: 82
effective length of query: 138
effective length of database: 20,514,301
effective search space: 2830973538
effective search space used: 2830973538
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 60 (28.3 bits)