GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001341-TA|BGIBMGA001341-PA|undefined
         (220 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          24   0.98 
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   6.9  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   6.9  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          21   9.1  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   9.1  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.1  

>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 10/21 (47%), Positives = 12/21 (57%)

Query: 179 FHNGDTRPPTHLTWHNKKYEL 199
           FH+ D RP T+L    K  EL
Sbjct: 121 FHHDDARPHTYLVTRQKLLEL 141


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 3/24 (12%)

Query: 1   MMQRNMIKI---AKITDIIPQICS 21
           M  R++I +     IT +IPQ+CS
Sbjct: 220 MFNRDLIIVQTGCTITRVIPQVCS 243


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 3/24 (12%)

Query: 1   MMQRNMIKI---AKITDIIPQICS 21
           M  R++I +     IT +IPQ+CS
Sbjct: 220 MFNRDLIIVQTGCTITRVIPQVCS 243


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/21 (42%), Positives = 11/21 (52%)

Query: 179 FHNGDTRPPTHLTWHNKKYEL 199
           FH+ + RP T L    K  EL
Sbjct: 120 FHHDNARPHTSLVTRQKLLEL 140


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/21 (42%), Positives = 11/21 (52%)

Query: 179 FHNGDTRPPTHLTWHNKKYEL 199
           FH+ + RP T L    K  EL
Sbjct: 242 FHHDNARPHTSLVTRQKLLEL 262


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/19 (42%), Positives = 10/19 (52%)

Query: 190 LTWHNKKYELDLNWFDENV 208
           LT H   YEL   + DE +
Sbjct: 765 LTHHEYDYELSRGYIDEKI 783


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.324    0.142    0.445 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,303
Number of Sequences: 429
Number of extensions: 2822
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 6
length of query: 220
length of database: 140,377
effective HSP length: 55
effective length of query: 165
effective length of database: 116,782
effective search space: 19269030
effective search space used: 19269030
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 42 (21.0 bits)