Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001340-TA|BGIBMGA001340-PA|undefined
(356 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g32180.1 68417.m04580 eukaryotic pantothenate kinase family p... 212 3e-55
At4g35360.1 68417.m05024 pantothenate kinase family protein cont... 188 7e-48
At2g17340.1 68415.m02003 pantothenate kinase-related contains Pf... 185 3e-47
At2g17320.1 68415.m02001 pantothenate kinase-related similar to ... 176 2e-44
At4g32700.1 68417.m04655 DNA-directed DNA polymerase family prot... 29 3.6
At2g31830.1 68415.m03887 endonuclease/exonuclease/phosphatase fa... 29 4.7
At5g40320.1 68418.m04892 DC1 domain-containing protein contains ... 29 6.3
At2g19390.1 68415.m02262 expressed protein 29 6.3
>At4g32180.1 68417.m04580 eukaryotic pantothenate kinase family
protein similar to pantothenate kinase [Emericella
nidulans] GI:4191500; contains Pfam profiles PF03630:
Fumble, PF01937: Protein of unknown function
Length = 901
Score = 212 bits (517), Expect = 3e-55
Identities = 135/375 (36%), Positives = 199/375 (53%), Gaps = 37/375 (9%)
Query: 9 ILYEPDKYNPDTLDLLADEEAREYWLCTCEKLVEKYVKFALVNNNDPT-VEIRALKFKTC 67
+L +P Y P+T+DL +D+ REYWL + + V A+ + + R F
Sbjct: 527 LLADPKTYEPNTIDL-SDQGEREYWLKVLSEHLPDLVDTAVASEGGTEDAKRRGDAFARA 585
Query: 68 YVEALKELRINPLAHGQLTIRLLLDINETCLRSQGFFDLWKQQKKFENEGALASLSSRLA 127
+ L L P A+G+L + LL++ E CLR F D ++ K+ ENE +LA L L
Sbjct: 586 FSAHLARLMEEPAAYGKLGLANLLELREECLREFQFVDAYRSIKQRENEASLAVLPDLLE 645
Query: 128 EIDAITNDRQRWTELCRGVLAGNMFDWGAQAVTSILDCG----LYEALEKIQKRPWLFDG 183
E+D+++ + + T L GVLA N+FDWG++A + G +Y +RPW D
Sbjct: 646 ELDSMSEEARLLT-LIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMQRPWRVDD 704
Query: 184 LEKWLDKL------EKTVHHCAAIFVDNSGVDIVLGILPFVRGLLLRGTSVILCANEWPA 237
+ + +++ + H A +FVDNSG D++LG+LP R L RGT V+L AN PA
Sbjct: 705 FDAFKERMLGSGGKQPHRHKRALLFVDNSGADVILGMLPLAREFLRRGTEVVLVANSLPA 764
Query: 238 LNDVTNIELEEILQHASLICQVLAAALSTGDLVVKS---------------------SGQ 276
LNDVT +EL +I+ A+ C +L A G L+V + +G
Sbjct: 765 LNDVTAMELPDIVAGAAKHCDILRRAAEMGGLLVDAMVNPGDGSKKDSTSAPLMVVENGC 824
Query: 277 RGPCLDFRTISIGLCTEMKVRGVDLIILEGMGRALHTNFNACLAVDSLKLAVVKNAWLAQ 336
PC+D R +S L K DL++LEGMGRALHTNFNA ++LKLA+VKN LA+
Sbjct: 825 GSPCIDLRQVSSELAAAAK--DADLVVLEGMGRALHTNFNAQFQCEALKLAMVKNQRLAE 882
Query: 337 RL-GGPLFSVIFIYE 350
+L G ++ + YE
Sbjct: 883 KLIKGNIYDCVCRYE 897
>At4g35360.1 68417.m05024 pantothenate kinase family protein
contains Pfam domain, PF01937: Protein of unknown
function; similar to SP|Q9NVE7 Pantothenate kinase 4 (EC
2.7.1.33) (Pantothenic acid kinase 4) (hPanK4) {Homo
sapiens}
Length = 367
Score = 188 bits (457), Expect = 7e-48
Identities = 116/326 (35%), Positives = 172/326 (52%), Gaps = 7/326 (2%)
Query: 33 WLCTCEKLVEKYVKFALVNNNDPTVEIRALKFKTCYVEALKELRINPLAHGQLTIRLLL- 91
W+ + + + A + P +RA KF Y E L++L+ +P +HG +LL
Sbjct: 45 WIDLFSNSIPSFKERAESDTTVPDAPVRAEKFAKRYAEILEDLKKDPESHGGPPDCILLC 104
Query: 92 DINETCLRSQGFFDLWKQQKKFENEGALASLSSRLAEIDAITNDRQRWTELCRGVLAGNM 151
I E LR GF D++K+ K EN A++ + DAI ++ +R L RG+ AGN+
Sbjct: 105 RIRELILRELGFRDIFKKVKDEENAKAISLFPEVVRLSDAINDEGKRIENLVRGIFAGNI 164
Query: 152 FDWGAQAVTSILD---CGLYEALEKIQKRPWLFDGLEKWLDKLEKTVHHCAAIFVDNSGV 208
FD G+ + + + + + RPW+ D L+ + + K A IFVDNSG
Sbjct: 165 FDLGSAQLAEVFSKDGMSFLASCQNLVSRPWVIDDLDNFQARWLKKPWKKAVIFVDNSGA 224
Query: 209 DIVLGILPFVRGLLLRGTSVILCANEWPALNDVTNIELEEILQHASLICQVLAAALSTGD 268
DI+LGILPF R +L G V+L ANE P++NDVT IEL EIL + L + T +
Sbjct: 225 DIILGILPFAREMLRLGMQVVLAANELPSINDVTYIELAEILSKLNDENGQL-MGVDTSN 283
Query: 269 LVVKSSGQRGPCLDFRTISIGLCTEMKVRGVDLIILEGMGRALHTNFNACLAVDSLKLAV 328
L++ +SG P +D +S + DL+ILEGMGR + TN A DSLK+ +
Sbjct: 284 LLIANSGNDLPVIDLARVSQEVA--YLSSDADLVILEGMGRGIETNLYAQFKCDSLKIGM 341
Query: 329 VKNAWLAQRLGGPLFSVIFIYEDTPI 354
VK+ +AQ LGG L+ + Y + I
Sbjct: 342 VKHPEVAQFLGGRLYDCVIKYNEVQI 367
>At2g17340.1 68415.m02003 pantothenate kinase-related contains Pfam
domain, PF01937: Protein of unknown function; supported
by tandem duplication of pantothenate kinase -related
protein (TIGR_Ath1:At2g17320) [Arabidopsis thaliana]
Length = 367
Score = 185 bits (451), Expect = 3e-47
Identities = 120/328 (36%), Positives = 175/328 (53%), Gaps = 17/328 (5%)
Query: 33 WLCTCEKLVEKYVKFALVNNNDPTVEIRALKFKTCYVEALKELRINPLAHGQLTIRLLL- 91
W+ + + K A + P RA KF Y L++L+ +P +HG +LL
Sbjct: 45 WINVFANSIPSFKKRAESDITVPDAPARAEKFAERYAGILEDLKKDPESHGGPPDGILLC 104
Query: 92 DINETCLRSQGFFDLWKQQKKFENEGALASLSSRLAEIDAITNDRQRWTELCRGVLAGNM 151
+ E LR GF D++K+ K EN A++ ++ DAI +D +R L RG+ AGN+
Sbjct: 105 RLREQVLRELGFRDIFKKVKDEENAKAISLFPQVVSLSDAIEDDGKRLENLVRGIFAGNI 164
Query: 152 FDWGAQAVTSILD---CGLYEALEKIQKRPWLFDGLE----KWLDKLEKTVHHCAAIFVD 204
FD G+ + + + + + RPW+ D LE KW++K K A IFVD
Sbjct: 165 FDLGSAQLAEVFSRDGMSFLASCQNLVPRPWVIDDLENFQAKWINKSWKK----AVIFVD 220
Query: 205 NSGVDIVLGILPFVRGLLLRGTSVILCANEWPALNDVTNIELEEIL-QHASLICQVLAAA 263
NSG DI+LGILPF R LL RG V+L ANE P++ND+T EL EIL Q Q+L
Sbjct: 221 NSGADIILGILPFARELLRRGAQVVLAANELPSINDITCTELTEILSQLKDENGQLL--G 278
Query: 264 LSTGDLVVKSSGQRGPCLDFRTISIGLCTEMKVRGVDLIILEGMGRALHTNFNACLAVDS 323
+ T L++ +SG P +D +S L DL+I+EGMGR + TN A DS
Sbjct: 279 VDTSKLLIANSGNDLPVIDLSRVSQELA--YLSSDADLVIVEGMGRGIETNLYAQFKCDS 336
Query: 324 LKLAVVKNAWLAQRLGGPLFSVIFIYED 351
LK+ +VK+ +A+ LGG L+ +F + +
Sbjct: 337 LKIGMVKHLEVAEFLGGRLYDCVFKFNE 364
>At2g17320.1 68415.m02001 pantothenate kinase-related similar to
Probable pantothenate kinase 1 (Pantothenic acid kinase
1) (Swiss-Prot:Q8L5Y9) [Arabidopsis thaliana]; similar
to Pantothenate kinase 4 (Pantothenic acid kinase 4)
(hPanK4) (Swiss-Prot:Q9NVE7) [Homo sapiens]; contains
Pfam PF01937: Protein of unknown function
Length = 361
Score = 176 bits (429), Expect = 2e-44
Identities = 113/323 (34%), Positives = 166/323 (51%), Gaps = 7/323 (2%)
Query: 33 WLCTCEKLVEKYVKFALVNNNDPTVEIRALKFKTCYVEALKELRINPLAHGQLTIRLLLD 92
W+ + + K A + + P RA F+ Y L+ + +P ++G ++L
Sbjct: 39 WINVFANSIPSFKKRAESDTSVPDAPARAKIFEQRYAGFLEGWKKDPESNGGPPDGVILG 98
Query: 93 -INETCLRSQGFFDLWKQQKKFENEGALASLSSRLAEIDAITNDRQRWTELCRGVLAGNM 151
+ E LR GF D++K+ K EN A++ ++ DAI +D +R L RG+ AGN+
Sbjct: 99 RVREHLLRELGFRDIFKKVKDEENAKAISLFPEVVSLSDAIEDDGERLENLVRGIFAGNI 158
Query: 152 FDWGAQAVTSILD---CGLYEALEKIQKRPWLFDGLEKWLDKLEKTVHHCAAIFVDNSGV 208
FD G+ + + + + RPW+ D L K+ K K A IFVDNSG
Sbjct: 159 FDLGSAQLAEVFSRDGISFLATSQNLVPRPWVIDDLNKFQAKWVKKPWKKAVIFVDNSGA 218
Query: 209 DIVLGILPFVRGLLLRGTSVILCANEWPALNDVTNIELEEILQHASLICQVLAAALSTGD 268
DI+LGILPF R LL RG V+L ANE PA+NDVT EL +I+ L + T
Sbjct: 219 DIILGILPFARELLRRGIQVVLAANELPAINDVTYTELTDIVSQLKDGNGQL-IGVDTSK 277
Query: 269 LVVKSSGQRGPCLDFRTISIGLCTEMKVRGVDLIILEGMGRALHTNFNACLAVDSLKLAV 328
L++ +SG +D +S L DL+ILEGMGR + TN A DSLK+ +
Sbjct: 278 LLIANSGNDLAVIDLSRVSHELA--YLSSDADLVILEGMGRGIETNLYAQFKCDSLKIGM 335
Query: 329 VKNAWLAQRLGGPLFSVIFIYED 351
VK+ +AQ LGG L+ +F + +
Sbjct: 336 VKHVEVAQFLGGRLYDCVFKFNE 358
>At4g32700.1 68417.m04655 DNA-directed DNA polymerase family protein
similar to DNA helicase HEL308 [Homo sapiens]
GI:19110782; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain, PF00476: DNA polymerase family A
Length = 1548
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 127 AEIDAITNDRQRWTELCRGVLAGNMFDWGAQAVTSILDCGLYEALEKIQKRPWLFDGLEK 186
AE +DR + L G+L G GA + L+C EA EKI+ F +
Sbjct: 1333 AEDSVSPHDRDQTKRLIYGILYG----MGANRLAEQLECTSDEAKEKIRSFKSSFPAVTS 1388
Query: 187 WLDK 190
WL++
Sbjct: 1389 WLNE 1392
>At2g31830.1 68415.m03887 endonuclease/exonuclease/phosphatase
family protein belongs to Pfam:PF03372:
Endonuclease/Exonuclease/phosphatase family; contains 4
WD-40 repeats (PF00400);similar to SP:Q01968 Inositol
polyphosphate 5-phosphatase OCRL-1 (EC 3.1.3.-)(Lowe's
oculocerebrorenal syndrome protein) (SP:Q01968) [Homo
sapiens]
Length = 1144
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Query: 179 WLFDGLEKWLD-KLEKTVHHCAAIFVDNSGVDI 210
W D LEK L KLE+ H AA+ V+ SG+D+
Sbjct: 297 WTLDSLEKSLVLKLEEK--HMAALLVERSGIDL 327
>At5g40320.1 68418.m04892 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 594
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Query: 15 KYNPDTLDLLADEE---AREYWLCTCEKLVEKYVKFALVNNNDPTVEIRALKFKTCYVEA 71
KY+ L L D + A YW CEK +++ + F ++ PT+ I + YV+
Sbjct: 470 KYDRHPLKLCYDGDKDMAGSYWCEICEKEMDQNIIFYTCESSGPTIHIECVLGDFRYVKP 529
Query: 72 LKELRIN 78
N
Sbjct: 530 RLHFEFN 536
>At2g19390.1 68415.m02262 expressed protein
Length = 1211
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 182 DGLEKWLDKLEKTVHHCAAIFVDNSGVDIV 211
DG ++K+ HHC F DNS +D V
Sbjct: 805 DGSAILFKGVDKSAHHCNGKFPDNSPIDFV 834
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.323 0.139 0.429
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,408,702
Number of Sequences: 28952
Number of extensions: 338015
Number of successful extensions: 789
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 771
Number of HSP's gapped (non-prelim): 9
length of query: 356
length of database: 12,070,560
effective HSP length: 82
effective length of query: 274
effective length of database: 9,696,496
effective search space: 2656839904
effective search space used: 2656839904
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 60 (28.3 bits)
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