Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001340-TA|BGIBMGA001340-PA|undefined
(356 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 29 1.3
SPCC1183.01 |sec15|SPCC1672.13|exocyst complex subunit Sec15 |Sc... 28 2.3
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 27 4.0
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 27 5.3
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 27 5.3
SPCC663.10 |||methyltransferase, DUF1613 family |Schizosaccharom... 27 5.3
SPBC337.03 |||conserved eukaryotic protein|Schizosaccharomyces p... 26 9.3
SPBC12C2.11 ||SPBC21D10.02|glutamine-fructose-6-phosphate transa... 26 9.3
SPAC1F7.07c |fip1||iron permease Fip1|Schizosaccharomyces pombe|... 26 9.3
>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 153 DWGAQAVTSILDCGLYEALEKIQ-KRPWLFDGLEKWLDKLEKTV 195
D + VT +D + + KI+ K P L+D +K+ D++EK V
Sbjct: 108 DSDGELVTPEVDAAILRMIVKIRNKDPDLYDSQQKYFDEVEKDV 151
>SPCC1183.01 |sec15|SPCC1672.13|exocyst complex subunit Sec15
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 785
Score = 27.9 bits (59), Expect = 2.3
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 27 EEAREYWLCTCEKLVEKYVKFALVNNNDPTV 57
EE + W CEKLVE + A + T+
Sbjct: 339 EEVQNIWTIICEKLVETILSVAFTEQSTTTI 369
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.1 bits (57), Expect = 4.0
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 238 LNDVTNIELEEILQHASLICQVLAAALSTGDLVVKSSGQR 277
L + T EL + +Q+ L+CQ A L DL VKSS ++
Sbjct: 462 LAESTYKELMDRVQNKDLLCQEQARKLEVLDLNVKSSREQ 501
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase
Hrp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1388
Score = 26.6 bits (56), Expect = 5.3
Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Query: 171 LEKIQKRPWLFDGLEK-WLDKL 191
L+K P+LFDG+E+ W+ K+
Sbjct: 651 LKKASNHPYLFDGVEESWMQKI 672
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 26.6 bits (56), Expect = 5.3
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 26 DEEAREYWLCTCEKLVEKYVKFALVNNNDPTVEIRALKFKTCYVE-ALKELR 76
D+ A + W+ + VE+ F + N+DP +E +K T Y+E LK+L+
Sbjct: 702 DDTAFKLWITSRLDSVERDRDF-VYENSDPNLEHGKIKIATDYMERRLKKLK 752
>SPCC663.10 |||methyltransferase, DUF1613 family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 502
Score = 26.6 bits (56), Expect = 5.3
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 57 VEIRALKFKTCYVEAL--KELRINPLAHGQLTIRLLLDINETCLRSQGFF 104
+E+ L+ + AL ++L N L H L+ L DI E SQGFF
Sbjct: 439 IEVEPLRIPSTRNYALIGRKLLSNDLLHSSLSTDALYDIVEKNHGSQGFF 488
>SPBC337.03 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 387
Score = 25.8 bits (54), Expect = 9.3
Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 7/97 (7%)
Query: 104 FDLWKQQKKFENEGALASLSSRL--AEIDAITN----DRQRWTELCRGVLAGNMFDWGAQ 157
FD+W Q+ F E L SL R AE +N W R + +++ A
Sbjct: 108 FDVWCQRGIFSKE-ILLSLQERFNNAENSGHSNYYPVGPPEWAPYTRLMTQTSLYAKSAH 166
Query: 158 AVTSILDCGLYEALEKIQKRPWLFDGLEKWLDKLEKT 194
+ +++D LEK L D +K L+K ++
Sbjct: 167 STKTVVDALYKSYLEKQSDYSELLDNYKKQLNKASES 203
>SPBC12C2.11 ||SPBC21D10.02|glutamine-fructose-6-phosphate
transaminase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 696
Score = 25.8 bits (54), Expect = 9.3
Identities = 10/33 (30%), Positives = 24/33 (72%)
Query: 169 EALEKIQKRPWLFDGLEKWLDKLEKTVHHCAAI 201
+++ ++++R + DGL + +K+++T+H AAI
Sbjct: 511 DSVSRLERRNEIIDGLAEIGEKVQETLHLNAAI 543
>SPAC1F7.07c |fip1||iron permease Fip1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 397
Score = 25.8 bits (54), Expect = 9.3
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 185 EKWLDKLEKTVHHCAAIFVDNSGVDIVLGILPFVRGLLLRGTSVIL 230
EKW KL K++ + A + N G + +LPF +L G V++
Sbjct: 120 EKWRKKLMKSIANRKAKGISNWGKKYSMFLLPFFT-VLREGLEVVV 164
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.323 0.139 0.429
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,619,222
Number of Sequences: 5004
Number of extensions: 65172
Number of successful extensions: 155
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 152
Number of HSP's gapped (non-prelim): 9
length of query: 356
length of database: 2,362,478
effective HSP length: 74
effective length of query: 282
effective length of database: 1,992,182
effective search space: 561795324
effective search space used: 561795324
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 54 (25.8 bits)
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