Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001340-TA|BGIBMGA001340-PA|undefined
(356 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_02_0170 + 12551040-12551209,12551297-12551362,12552438-125525... 194 9e-50
09_06_0064 + 20627265-20627538,20628062-20628274,20628772-206288... 106 2e-23
12_01_1080 + 11241590-11241625,11241723-11242018,11242113-112422... 33 0.35
11_01_0477 - 3688357-3690042 29 7.5
06_01_0691 - 5040280-5040801,5041439-5041529,5042368-5042568,504... 29 7.5
11_02_0061 + 7904260-7904824,7904935-7905470,7906184-7906861 28 9.9
02_02_0392 - 9649858-9650405,9650499-9650670,9650788-9650926,965... 28 9.9
>06_02_0170 +
12551040-12551209,12551297-12551362,12552438-12552504,
12552588-12552656,12552771-12552911,12553202-12553330,
12554002-12554088,12554664-12554738,12554839-12554916,
12555014-12555091,12555173-12555235,12555341-12555415
Length = 365
Score = 194 bits (473), Expect = 9e-50
Identities = 119/306 (38%), Positives = 170/306 (55%), Gaps = 10/306 (3%)
Query: 53 NDPTVE---IRALKFKTCYVEALKELRINPLAHGQLTIRLLL-DINETCLRSQGFFDLWK 108
NDPTV +A KF Y L+EL+ NP ++G +LL + E LR GF D++K
Sbjct: 62 NDPTVPDAPAKAEKFAQRYTAMLEELKKNPESNGGPPDCILLCRLRELVLRELGFRDIFK 121
Query: 109 QQKKFENEGALASLSSRLAEIDAITNDRQRWTELCRGVLAGNMFDWGAQAVTSIL---DC 165
+ K EN A++ + D I +D +R L RG+LAGN+FD G+ + +
Sbjct: 122 KVKDEENAKAMSLFEGVVQRNDEIEDDGKRAENLIRGILAGNIFDLGSAQLAEVFAKDGM 181
Query: 166 GLYEALEKIQKRPWLFDGLEKWLDKLEKTVHHCAAIFVDNSGVDIVLGILPFVRGLLLRG 225
+ + + RPW+ D L+ + +K K A IFVDNSG DI+LGILPF R LL G
Sbjct: 182 SFLASCQNLVSRPWVIDDLDAFQNKWTKKSWEKAVIFVDNSGADIILGILPFARELLRHG 241
Query: 226 TSVILCANEWPALNDVTNIELEEILQHASLICQVLAAALSTGDLVVKSSGQRGPCLDFRT 285
T VIL AN+ P++NDVT EL EI+ L A + DL+V +SG P +D +
Sbjct: 242 TKVILAANDMPSINDVTYPELVEIINKLKDENGKL-AGVDASDLLVANSGNDLPVIDLSS 300
Query: 286 ISIGLCTEMKVRGVDLIILEGMGRALHTNFNACLAVDSLKLAVVKNAWLAQRLGGPLFSV 345
+S L DL++LEGMGRA+ TN A + DS+K+ +VK+ +AQ LGG L+
Sbjct: 301 VSPELA--YLANDADLVVLEGMGRAIETNLYAQMKCDSIKIGMVKHPEVAQFLGGRLYDC 358
Query: 346 IFIYED 351
+F + +
Sbjct: 359 VFKFNE 364
>09_06_0064 +
20627265-20627538,20628062-20628274,20628772-20628827,
20629417-20629533,20629701-20629820,20629910-20630004,
20630092-20630185,20630406-20630537,20631190-20631302,
20631423-20631657,20631950-20632028,20632029-20632161,
20632780-20632821,20632902-20632950,20633443-20633525,
20633686-20633802,20633893-20633956,20634334-20634486,
20635043-20635126,20635207-20635401,20635507-20635578,
20635599-20635610
Length = 843
Score = 106 bits (255), Expect = 2e-23
Identities = 66/149 (44%), Positives = 81/149 (54%), Gaps = 23/149 (15%)
Query: 199 AAIFVDNSGVDIVLGILPFVRGLLLRGTSVILCANEWPALNDVTNIELEEILQHASLICQ 258
A +FVDNSG D+VLG++P R LL GT V+L AN PALNDVT EL I+ A+ C
Sbjct: 695 ALLFVDNSGADVVLGMIPLARELLRNGTEVVLVANSLPALNDVTANELPGIVAEAAKHCG 754
Query: 259 VLAAALSTGDLV---------------------VKSSGQRGPCLDFRTISIGLCTEMKVR 297
+L A G L+ V +G PC+DFR +S L K
Sbjct: 755 ILRKAAEAGGLIFDAMAGIQDDLKDEPVSVPLMVVENGCGSPCIDFRQVSSELAAAAK-- 812
Query: 298 GVDLIILEGMGRALHTNFNACLAVDSLKL 326
DL+ILEGMGR+LHTN NA D+LKL
Sbjct: 813 DADLLILEGMGRSLHTNLNARFKCDTLKL 841
Score = 56.0 bits (129), Expect = 4e-08
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Query: 9 ILYEPDKYNPDTLDLLADEEAREYWL-CTCEKLVEKYVKFALVNNNDPTVEIRALKFKTC 67
+L +P Y P+T+DL D +YW + L + K + R F
Sbjct: 548 LLEDPKMYEPNTIDL--DLNEYKYWFKILSDHLPDLVDKAVASEGGTDDAKRRGDAFAHA 605
Query: 68 YVEALKELRINPLAHGQLTIRLLLDINETCLRSQGFFDLWKQQKKFENEGALASLSSRLA 127
+ L L P A+G+ + LL++ E CLR F D + K+ ENE +LA L L
Sbjct: 606 FSAHLARLMEEPAAYGKFGLANLLELREECLREFQFVDAYVSIKQRENEASLAVLPDLLM 665
Query: 128 EIDAI 132
E+D++
Sbjct: 666 ELDSM 670
>12_01_1080 + 11241590-11241625,11241723-11242018,11242113-11242269,
11242381-11242449,11242551-11243480,11243868-11243906,
11244414-11244478,11244663-11244768,11244850-11245050,
11247001-11247201,11247756-11247779,11249425-11249586,
11249676-11249915,11250267-11250479,11250618-11250968,
11251041-11251193,11251649-11251858,11252049-11252267,
11252365-11252482,11252879-11253828,11254023-11254220,
11254294-11254553,11255316-11255505,11255817-11256169,
11258278-11258386,11258466-11258615,11258748-11258844,
11259315-11259415
Length = 2065
Score = 33.1 bits (72), Expect = 0.35
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 141 ELCRGVLAGNMFDWGAQAVTSILDCGLYEALEKIQKRPWLFDGLEKWLDKLEKTVHH 197
E + + G ++ GA ++ L+C +A +KIQ F G+ WL + + H
Sbjct: 1856 ETTKRFIYGILYGMGANSLAEQLECSPEDAAQKIQSFKRFFPGVSSWLHEAVASCRH 1912
>11_01_0477 - 3688357-3690042
Length = 561
Score = 28.7 bits (61), Expect = 7.5
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 115 NEGALASLSSRLAEIDAITNDRQR-WTELCRGVLAGNMFDWGAQAV 159
++G LS ++ DR+ W +LCRG++ +MFD G + +
Sbjct: 214 DDGKAEELSFWETDMVVPVGDRRLCWVDLCRGIILCDMFDDGDETL 259
>06_01_0691 - 5040280-5040801,5041439-5041529,5042368-5042568,
5042649-5046148
Length = 1437
Score = 28.7 bits (61), Expect = 7.5
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 130 DAITNDRQRWTELCRGVLAGNMFDWGAQAVTSILDCGLYEALEKIQKR-PWLFDGLEKWL 188
D + D Q WT R D + S+ DCG + + +R LF ++ +L
Sbjct: 1125 DGVEPDHQVWTSFIRAASLCEQTDDAILLLKSLQDCGFDLPIRLLTERTSSLFTEVDSFL 1184
Query: 189 DKLEKTVHHCAAIFVDNSGVDIV 211
+KL T+ A++ N+ D++
Sbjct: 1185 EKL-GTLEDSASLNFVNALEDLL 1206
>11_02_0061 + 7904260-7904824,7904935-7905470,7906184-7906861
Length = 592
Score = 28.3 bits (60), Expect = 9.9
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 116 EGALASLSSRLAEIDAITNDRQRWTELCRG 145
E A+A+ S+R ++DA + R+R+ +CRG
Sbjct: 410 EAAIAAGSAREPDLDAGSRRRRRYHRICRG 439
>02_02_0392 -
9649858-9650405,9650499-9650670,9650788-9650926,
9651113-9651334,9651422-9651495,9653042-9653661,
9653810-9653965,9655250-9655347,9655443-9655534,
9655891-9655977
Length = 735
Score = 28.3 bits (60), Expect = 9.9
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 8 HILYEPDKYNPDTLDLLADEEAR 30
+++ P+ YN DT+DLLA E A+
Sbjct: 384 NVVLWPEPYNKDTIDLLAKEGAK 406
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.323 0.139 0.429
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,283,959
Number of Sequences: 37544
Number of extensions: 408686
Number of successful extensions: 892
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 880
Number of HSP's gapped (non-prelim): 9
length of query: 356
length of database: 14,793,348
effective HSP length: 83
effective length of query: 273
effective length of database: 11,677,196
effective search space: 3187874508
effective search space used: 3187874508
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 60 (28.3 bits)
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