GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001340-TA|BGIBMGA001340-PA|undefined
         (356 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L76038-1|AAC27383.1|  683|Anopheles gambiae prophenoloxidase pro...    25   4.2  
AF031626-1|AAD01936.1|  683|Anopheles gambiae prophenoloxidase p...    25   4.2  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   9.8  

>L76038-1|AAC27383.1|  683|Anopheles gambiae prophenoloxidase
           protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 184 LEKWLDKLEKTVHHCAAIFVDNSGVDIVL 212
           LE+W+D++ + +H      VD SG  I L
Sbjct: 309 LERWIDRIYEAIHQ--GFVVDESGNRIPL 335


>AF031626-1|AAD01936.1|  683|Anopheles gambiae prophenoloxidase
           protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 184 LEKWLDKLEKTVHHCAAIFVDNSGVDIVL 212
           LE+W+D++ + +H      VD SG  I L
Sbjct: 309 LERWIDRIYEAIHQ--GFVVDESGNRIPL 335


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 82  HGQLTIRLLLDINETCLRSQGFFDLWKQQ 110
           HG+ T RL+ D+N    R  G  D +  Q
Sbjct: 863 HGRWTYRLIPDVNRWISRRFGGVDFFLSQ 891


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.139    0.429 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 370,328
Number of Sequences: 2123
Number of extensions: 14120
Number of successful extensions: 69
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 67
Number of HSP's gapped (non-prelim): 4
length of query: 356
length of database: 516,269
effective HSP length: 65
effective length of query: 291
effective length of database: 378,274
effective search space: 110077734
effective search space used: 110077734
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 48 (23.4 bits)