Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001339-TA|BGIBMGA001339-PA|IPR008518|Protein of unknown
function DUF800
(198 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 31 0.55
AY145133-1|AAN52916.1| 435|Caenorhabditis elegans TCL-2 protein. 29 2.2
AC024761-7|AAF59468.3| 435|Caenorhabditis elegans T cell lineag... 29 2.2
Z54237-6|CAB54312.2| 645|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical pr... 29 2.9
U40800-4|AAO91742.1| 763|Caenorhabditis elegans Hypothetical pr... 27 6.8
U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical pr... 27 6.8
AC091125-5|AAK27884.2| 297|Caenorhabditis elegans Hypothetical ... 27 6.8
U41532-7|ABD63237.1| 769|Caenorhabditis elegans Hypothetical pr... 27 9.0
U41532-6|AAF99908.2| 812|Caenorhabditis elegans Hypothetical pr... 27 9.0
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 31.1 bits (67), Expect = 0.55
Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 4/97 (4%)
Query: 57 PREIQLDNAVLPT--DPGMVRVSTP-PRIITLDQHYFPSADDFPHGMPNN-SPPRNIKTY 112
P + A LPT G V+TP P ++ F P MP PP T+
Sbjct: 755 PSTPTISPAPLPTTGSSGGPDVTTPAPPVMVTGPLIFIIPTVIPSTMPTTPEPPTISSTF 814
Query: 113 RSQGDGARTTTPRPDHFNESIMTESRLVLRINGFRDP 149
A TP P H +S T S + ++ F +P
Sbjct: 815 TPAATQASPATPTPQHVAQSAPTNSIIGGSLDSFTNP 851
>AY145133-1|AAN52916.1| 435|Caenorhabditis elegans TCL-2 protein.
Length = 435
Score = 29.1 bits (62), Expect = 2.2
Identities = 24/105 (22%), Positives = 40/105 (38%), Gaps = 5/105 (4%)
Query: 75 RVSTPPRIITLDQHYFPSADDFPHGMPNNSPPRNIKTYRSQGDGARTTTPRPDHFNESIM 134
R+ TPP H P+ + P G SPP K + + PD +SI
Sbjct: 88 RIRTPPNRKKKISHEGPNQEALPPGFNLFSPPSRKKIKTAFSSPPPKSMKTPDSLRKSIR 147
Query: 135 TESRLVLRINGFRDPTPPIGNGEGLSTAEELVHLRRQIVKLNRRV 179
S ++ + P + N E ++ +H+ R N++V
Sbjct: 148 ISSPSPFKVTFSKTPL-KLSNNENVTG----IHIGRSGTYYNKQV 187
>AC024761-7|AAF59468.3| 435|Caenorhabditis elegans T cell lineage
defect protein 2 protein.
Length = 435
Score = 29.1 bits (62), Expect = 2.2
Identities = 24/105 (22%), Positives = 40/105 (38%), Gaps = 5/105 (4%)
Query: 75 RVSTPPRIITLDQHYFPSADDFPHGMPNNSPPRNIKTYRSQGDGARTTTPRPDHFNESIM 134
R+ TPP H P+ + P G SPP K + + PD +SI
Sbjct: 88 RIRTPPNRKKKISHEGPNQEALPPGFNLFSPPSRKKIKTAFSSPPPKSMKTPDSLRKSIR 147
Query: 135 TESRLVLRINGFRDPTPPIGNGEGLSTAEELVHLRRQIVKLNRRV 179
S ++ + P + N E ++ +H+ R N++V
Sbjct: 148 ISSPSPFKVTFSKTPL-KLSNNENVTG----IHIGRSGTYYNKQV 187
>Z54237-6|CAB54312.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/40 (35%), Positives = 17/40 (42%)
Query: 87 QHYFPSADDFPHGMPNNSPPRNIKTYRSQGDGARTTTPRP 126
QHY P +P+N PP N +Y TT RP
Sbjct: 399 QHYQQHVVQAPPPVPSNPPPSNGSSYTKTSFERTTTETRP 438
>Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/40 (35%), Positives = 17/40 (42%)
Query: 87 QHYFPSADDFPHGMPNNSPPRNIKTYRSQGDGARTTTPRP 126
QHY P +P+N PP N +Y TT RP
Sbjct: 399 QHYQQHVVQAPPPVPSNPPPSNGSSYTKTSFERTTTETRP 438
>U40800-4|AAO91742.1| 763|Caenorhabditis elegans Hypothetical
protein D2096.12 protein.
Length = 763
Score = 27.5 bits (58), Expect = 6.8
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 106 PRNIKTYRSQGDGARTTTPRPDHFNESIMTESRLVLRINGFRDPTPPIGNGEGLSTAE-E 164
P ++ +RS G R N +I T S V + R TPP ST +
Sbjct: 171 PNSLARHRSANSGLR---------NAAIHTPSMRVANMFATRT-TPPFDTSSRPSTPSGD 220
Query: 165 LVHLRRQIVKLNRRVMSIEADNFKGNRRKK 194
++ LR Q+ R+V+ ++AD K +K+
Sbjct: 221 VIMLRDQLENEKRKVLRLQADFQKDVHKKE 250
>U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical
protein F23F12.8 protein.
Length = 980
Score = 27.5 bits (58), Expect = 6.8
Identities = 27/93 (29%), Positives = 36/93 (38%), Gaps = 10/93 (10%)
Query: 58 REIQLDNAVLPTDPGMVRVSTP------PRIITLDQHYFPSADDFPHGMPNNSPPRNIKT 111
R + NA T PG VR +TP R + QH A GMP+ P
Sbjct: 203 RNRERGNAPAFTRPGRVRTTTPMSVTHATRFVPGIQHKVTVAPKEVQGMPHTLAPYEKMD 262
Query: 112 YRSQGDGA-RTTTPRPDH---FNESIMTESRLV 140
R G TT P++ +N MTE+ +
Sbjct: 263 RRPDSFGVEELTTMTPEYTVRYNGQTMTENEFL 295
>AC091125-5|AAK27884.2| 297|Caenorhabditis elegans Hypothetical
protein Y67D2.7 protein.
Length = 297
Score = 27.5 bits (58), Expect = 6.8
Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 10/109 (9%)
Query: 79 PPRIITLDQHY-FPSADDFPH-GMPNNSPPRNIKTYRSQGDGARTTTPRPDHFNESIMTE 136
PP LD H P+A P GMP+ + ++ +Y GD + P + +
Sbjct: 59 PPAPKRLDDHSPSPAAFRTPVIGMPHAASTTSLVSYSGDGDDDDEDSSEPPKISGATP-- 116
Query: 137 SRLVLRINGFRDPTPPIGNGEGLSTAEELVHLRRQIVKLNRRVMSIEAD 185
I+ R+P PP + + EE + R I + N ++ + D
Sbjct: 117 ------ISEIREPAPPPRQSRDVESDEEQELIDRAIKEGNEAILRMNID 159
>U41532-7|ABD63237.1| 769|Caenorhabditis elegans Hypothetical
protein F11D5.1c protein.
Length = 769
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 63 DNAVLPTDPGMVRVSTPPRIITLDQHYFPSADDFPHGMPNNSP-PRNIKTY 112
D AVLP+DP RVS P + ++ S P P P ++TY
Sbjct: 312 DIAVLPSDPHSARVSIQPIPSIISENSSRSTTPVKASPPPEEPKPNVLETY 362
>U41532-6|AAF99908.2| 812|Caenorhabditis elegans Hypothetical
protein F11D5.1a protein.
Length = 812
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 63 DNAVLPTDPGMVRVSTPPRIITLDQHYFPSADDFPHGMPNNSP-PRNIKTY 112
D AVLP+DP RVS P + ++ S P P P ++TY
Sbjct: 355 DIAVLPSDPHSARVSIQPIPSIISENSSRSTTPVKASPPPEEPKPNVLETY 405
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.137 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,727,494
Number of Sequences: 27539
Number of extensions: 272377
Number of successful extensions: 493
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 487
Number of HSP's gapped (non-prelim): 10
length of query: 198
length of database: 12,573,161
effective HSP length: 78
effective length of query: 120
effective length of database: 10,425,119
effective search space: 1251014280
effective search space used: 1251014280
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 57 (27.1 bits)
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