GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001339-TA|BGIBMGA001339-PA|IPR008518|Protein of unknown
function DUF800
         (198 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    25   1.2  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          25   1.5  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   2.7  
AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    23   8.2  

>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)

Query: 123 TPRPDHFNESIMTESRLVLRINGFRDPTPP-IGNGEGLSTAEELVHLRR--QIVKLNRRV 179
           +P P   N+S+   + ++  I     PTPP +  G GL +   L +  R  QI    +R+
Sbjct: 380 SPSPQRGNQSLSQMTEILEAIQPEFPPTPPQLSPGVGLQSQNNLSNTNRSPQISPFAKRI 439


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 127 DHFNESIMTESRLVLRI-NGFRDPTPPIGNGEGLSTAEELVHLRRQIVKLNRRVMSIEA 184
           ++  E I+  +    R+ NG   P  P G         EL+++  Q  K N R++ +EA
Sbjct: 57  NYVTERILASTLPARRLQNGSSSPHAPNGTPPVDEHERELINMLEQKHKQNYRILDLEA 115


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 10/24 (41%), Positives = 16/24 (66%)

Query: 155  NGEGLSTAEELVHLRRQIVKLNRR 178
            NG  +S+AEEL   RR++ +  R+
Sbjct: 1179 NGRAVSSAEELERRRREMERTRRQ 1202


>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 6/65 (9%)

Query: 135 TESRLVLRINGFRDPTPPIGNGEGLSTAEEL-----VHLRRQIVKLNR-RVMSIEADNFK 188
           T+SRL  R    R  T  I   E + T EEL     +  R  I  L R R M +E    +
Sbjct: 144 TQSRLKQRFEAERKRTRVIRTEEYIPTQEELLEEAEITERENIKSLERFRRMELEKQKIR 203

Query: 189 GNRRK 193
              +K
Sbjct: 204 PTNKK 208


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.137    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,427
Number of Sequences: 2123
Number of extensions: 10541
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 13
Number of HSP's gapped (non-prelim): 4
length of query: 198
length of database: 516,269
effective HSP length: 61
effective length of query: 137
effective length of database: 386,766
effective search space: 52986942
effective search space used: 52986942
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 46 (22.6 bits)