GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001339-TA|BGIBMGA001339-PA|IPR008518|Protein of unknown
function DUF800
         (198 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051672-1|AAK93096.1|  277|Drosophila melanogaster LD22567p pro...   113   2e-25
AE013599-3269|AAM71013.1|  277|Drosophila melanogaster CG30404-P...   113   2e-25
AE013599-3268|AAM71012.1|  277|Drosophila melanogaster CG30404-P...   113   2e-25
AE014298-2144|AAN09666.2| 1453|Drosophila melanogaster CG9176-PC...    30   2.5  
AE014298-2143|AAF48450.3| 1853|Drosophila melanogaster CG9176-PB...    30   2.5  
AB030577-1|BAA89278.1| 1463|Drosophila melanogaster CNG channel-...    30   2.5  
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros...    29   5.7  
AY135133-1|AAN17639.1|  845|Drosophila melanogaster corkscrew ph...    28   9.9  
AY135132-1|AAN17637.1|  845|Drosophila melanogaster corkscrew ph...    28   9.9  
AY135131-1|AAN17635.1|  845|Drosophila melanogaster corkscrew ph...    28   9.9  
AY135130-1|AAN17633.1|  845|Drosophila melanogaster corkscrew ph...    28   9.9  
AJ252125-1|CAB64387.1|  470|Drosophila melanogaster Sox14 protei...    28   9.9  
AE014298-1476|AAF46611.1|  911|Drosophila melanogaster CG9806-PA...    28   9.9  
AE014296-1304|AAN12045.1| 9196|Drosophila melanogaster CG32377-P...    28   9.9  
AE013599-3763|AAF47126.2|  669|Drosophila melanogaster CG3090-PB...    28   9.9  
AE013599-3762|AAM68286.1|  669|Drosophila melanogaster CG3090-PA...    28   9.9  

>AY051672-1|AAK93096.1|  277|Drosophila melanogaster LD22567p
           protein.
          Length = 277

 Score =  113 bits (271), Expect = 2e-25
 Identities = 53/100 (53%), Positives = 77/100 (77%), Gaps = 6/100 (6%)

Query: 1   MTVPQRIKATGDIIDDE---TAPNGMVSGWDYANEKFDMKVPERILVIGQDQHVGTKAPP 57
           M VP+RIKATG+  +++   +  NGM+S W+Y ++K DM VP+RI+V+G +QH+ T++ P
Sbjct: 32  MRVPKRIKATGEYSNEDLLLSNQNGMISSWNY-HDKIDMNVPDRIVVLGHNQHLETRSAP 90

Query: 58  REIQLDNAVLPTDP--GMVRVSTPPRIITLDQHYFPSADD 95
           REIQL+N++LP +P  G+VRV TPPRIITL   +FPSA +
Sbjct: 91  REIQLENSILPKNPSVGLVRVQTPPRIITLTDQHFPSASE 130



 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 18/38 (47%), Positives = 31/38 (81%)

Query: 159 LSTAEELVHLRRQIVKLNRRVMSIEADNFKGNRRKKLL 196
           L+  EE+++LRRQ+ KLNRRV++IE +N +  +R+K++
Sbjct: 221 LTPHEEILYLRRQLAKLNRRVLNIEINNEQRTQREKIV 258


>AE013599-3269|AAM71013.1|  277|Drosophila melanogaster CG30404-PB,
           isoform B protein.
          Length = 277

 Score =  113 bits (271), Expect = 2e-25
 Identities = 53/100 (53%), Positives = 77/100 (77%), Gaps = 6/100 (6%)

Query: 1   MTVPQRIKATGDIIDDE---TAPNGMVSGWDYANEKFDMKVPERILVIGQDQHVGTKAPP 57
           M VP+RIKATG+  +++   +  NGM+S W+Y ++K DM VP+RI+V+G +QH+ T++ P
Sbjct: 32  MRVPKRIKATGEYSNEDLLLSNQNGMISSWNY-HDKIDMNVPDRIVVLGHNQHLETRSAP 90

Query: 58  REIQLDNAVLPTDP--GMVRVSTPPRIITLDQHYFPSADD 95
           REIQL+N++LP +P  G+VRV TPPRIITL   +FPSA +
Sbjct: 91  REIQLENSILPKNPSVGLVRVQTPPRIITLTDQHFPSASE 130



 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 18/38 (47%), Positives = 31/38 (81%)

Query: 159 LSTAEELVHLRRQIVKLNRRVMSIEADNFKGNRRKKLL 196
           L+  EE+++LRRQ+ KLNRRV++IE +N +  +R+K++
Sbjct: 221 LTPHEEILYLRRQLAKLNRRVLNIEINNEQRTQREKIV 258


>AE013599-3268|AAM71012.1|  277|Drosophila melanogaster CG30404-PA,
           isoform A protein.
          Length = 277

 Score =  113 bits (271), Expect = 2e-25
 Identities = 53/100 (53%), Positives = 77/100 (77%), Gaps = 6/100 (6%)

Query: 1   MTVPQRIKATGDIIDDE---TAPNGMVSGWDYANEKFDMKVPERILVIGQDQHVGTKAPP 57
           M VP+RIKATG+  +++   +  NGM+S W+Y ++K DM VP+RI+V+G +QH+ T++ P
Sbjct: 32  MRVPKRIKATGEYSNEDLLLSNQNGMISSWNY-HDKIDMNVPDRIVVLGHNQHLETRSAP 90

Query: 58  REIQLDNAVLPTDP--GMVRVSTPPRIITLDQHYFPSADD 95
           REIQL+N++LP +P  G+VRV TPPRIITL   +FPSA +
Sbjct: 91  REIQLENSILPKNPSVGLVRVQTPPRIITLTDQHFPSASE 130



 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 18/38 (47%), Positives = 31/38 (81%)

Query: 159 LSTAEELVHLRRQIVKLNRRVMSIEADNFKGNRRKKLL 196
           L+  EE+++LRRQ+ KLNRRV++IE +N +  +R+K++
Sbjct: 221 LTPHEEILYLRRQLAKLNRRVLNIEINNEQRTQREKIV 258


>AE014298-2144|AAN09666.2| 1453|Drosophila melanogaster CG9176-PC,
           isoform C protein.
          Length = 1453

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 70  DPGMVRVSTPPRIIT-LDQHYFPSADDFPHGMPN 102
           +PG+V V+TPP I + +D H+  S     H  PN
Sbjct: 767 EPGVVMVNTPPNISSKIDSHFAASQAGASHPGPN 800


>AE014298-2143|AAF48450.3| 1853|Drosophila melanogaster CG9176-PB,
           isoform B protein.
          Length = 1853

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 70  DPGMVRVSTPPRIIT-LDQHYFPSADDFPHGMPN 102
           +PG+V V+TPP I + +D H+  S     H  PN
Sbjct: 767 EPGVVMVNTPPNISSKIDSHFAASQAGASHPGPN 800


>AB030577-1|BAA89278.1| 1463|Drosophila melanogaster CNG
           channel-like protein.
          Length = 1463

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 70  DPGMVRVSTPPRIIT-LDQHYFPSADDFPHGMPN 102
           +PG+V V+TPP I + +D H+  S     H  PN
Sbjct: 767 EPGVVMVNTPPNISSKIDSHFAASQAGASHPGPN 800


>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
           Drosophila melanogastercopia-like element 17.6. ).
          Length = 1058

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 86  DQHYFPSADDFPHGMPNNSPPRNI-KTYRSQGDGARTTTPRPDHFNESIMTE 136
           + +YFP++      + N     N+ KT     D    TTP+P+H  E  M +
Sbjct: 775 ETYYFPNSQLLIQNIINECSICNLAKTEHRNTDMPTKTTPKPEHCREKFMID 826


>AY135133-1|AAN17639.1|  845|Drosophila melanogaster corkscrew
           phosphatase splice variantA protein.
          Length = 845

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 3/83 (3%)

Query: 91  PSADDFPHGMPNNSPPRNIKTYRSQGDG--ARTTTPRPDHFNESIMTESRLVLRINGFRD 148
           P+ + + HG  + +    +   R +      R +  +P  F  S+ T+ ++   +  ++D
Sbjct: 106 PTTERWFHGNLSGTEAEKLILERGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRWQD 165

Query: 149 PTPPIGNGEGLSTAEELV-HLRR 170
               +G GE   T  EL+ H +R
Sbjct: 166 KKYDVGGGESFGTLSELIDHYKR 188


>AY135132-1|AAN17637.1|  845|Drosophila melanogaster corkscrew
           phosphatase splice variantA protein.
          Length = 845

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 3/83 (3%)

Query: 91  PSADDFPHGMPNNSPPRNIKTYRSQGDG--ARTTTPRPDHFNESIMTESRLVLRINGFRD 148
           P+ + + HG  + +    +   R +      R +  +P  F  S+ T+ ++   +  ++D
Sbjct: 106 PTTERWFHGNLSGTEAEKLILERGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRWQD 165

Query: 149 PTPPIGNGEGLSTAEELV-HLRR 170
               +G GE   T  EL+ H +R
Sbjct: 166 KKYDVGGGESFGTLSELIDHYKR 188


>AY135131-1|AAN17635.1|  845|Drosophila melanogaster corkscrew
           phosphatase splice variantA protein.
          Length = 845

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 3/83 (3%)

Query: 91  PSADDFPHGMPNNSPPRNIKTYRSQGDG--ARTTTPRPDHFNESIMTESRLVLRINGFRD 148
           P+ + + HG  + +    +   R +      R +  +P  F  S+ T+ ++   +  ++D
Sbjct: 106 PTTERWFHGNLSGTEAEKLILERGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRWQD 165

Query: 149 PTPPIGNGEGLSTAEELV-HLRR 170
               +G GE   T  EL+ H +R
Sbjct: 166 KKYDVGGGESFGTLSELIDHYKR 188


>AY135130-1|AAN17633.1|  845|Drosophila melanogaster corkscrew
           phosphatase splice variantA protein.
          Length = 845

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 3/83 (3%)

Query: 91  PSADDFPHGMPNNSPPRNIKTYRSQGDG--ARTTTPRPDHFNESIMTESRLVLRINGFRD 148
           P+ + + HG  + +    +   R +      R +  +P  F  S+ T+ ++   +  ++D
Sbjct: 106 PTTERWFHGNLSGTEAEKLILERGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRWQD 165

Query: 149 PTPPIGNGEGLSTAEELV-HLRR 170
               +G GE   T  EL+ H +R
Sbjct: 166 KKYDVGGGESFGTLSELIDHYKR 188


>AJ252125-1|CAB64387.1|  470|Drosophila melanogaster Sox14 protein
           protein.
          Length = 470

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 3/53 (5%)

Query: 53  TKAPPREIQLDNAVLPTDPGMVRVSTPPRIITLDQHYFPSADDFPHGMPNNSP 105
           T  PP  + L    +PT P     + P  I    +H  P AD  PH +P  SP
Sbjct: 9   TTEPP--LSLRPGTVPTVPATTP-ARPATITIQRRHPAPKADSTPHTLPPFSP 58


>AE014298-1476|AAF46611.1|  911|Drosophila melanogaster CG9806-PA
           protein.
          Length = 911

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 11/66 (16%)

Query: 116 GDGARTTTPRPDHFNESIMTE-----------SRLVLRINGFRDPTPPIGNGEGLSTAEE 164
           G GA  +  RP H+N S++TE             +++R+  +R+    I +  GL   E 
Sbjct: 19  GTGATASNLRPLHYNLSLLTEVEPLKLSGNFSGEVIIRLRVWRETRTIILSNNGLQVGEN 78

Query: 165 LVHLRR 170
           ++ +RR
Sbjct: 79  VLLVRR 84


>AE014296-1304|AAN12045.1| 9196|Drosophila melanogaster CG32377-PA
            protein.
          Length = 9196

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 2/31 (6%)

Query: 98   HGMPNNSPPRNIKTYRSQ--GDGARTTTPRP 126
            H   ++SP  +   Y SQ  G+G+R+TTPRP
Sbjct: 8582 HFERSSSPASSSIFYESQPQGEGSRSTTPRP 8612


>AE013599-3763|AAF47126.2|  669|Drosophila melanogaster CG3090-PB,
           isoform B protein.
          Length = 669

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 3/53 (5%)

Query: 53  TKAPPREIQLDNAVLPTDPGMVRVSTPPRIITLDQHYFPSADDFPHGMPNNSP 105
           T  PP  + L    +PT P     + P  I    +H  P AD  PH +P  SP
Sbjct: 9   TTEPP--LSLRPGTVPTVPATTP-ARPATITIQRRHPAPKADSTPHTLPPFSP 58


>AE013599-3762|AAM68286.1|  669|Drosophila melanogaster CG3090-PA,
           isoform A protein.
          Length = 669

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 3/53 (5%)

Query: 53  TKAPPREIQLDNAVLPTDPGMVRVSTPPRIITLDQHYFPSADDFPHGMPNNSP 105
           T  PP  + L    +PT P     + P  I    +H  P AD  PH +P  SP
Sbjct: 9   TTEPP--LSLRPGTVPTVPATTP-ARPATITIQRRHPAPKADSTPHTLPPFSP 58


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.317    0.137    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,829,249
Number of Sequences: 52641
Number of extensions: 582277
Number of successful extensions: 1507
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1492
Number of HSP's gapped (non-prelim): 19
length of query: 198
length of database: 24,830,863
effective HSP length: 81
effective length of query: 117
effective length of database: 20,566,942
effective search space: 2406332214
effective search space used: 2406332214
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 59 (27.9 bits)