GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001339-TA|BGIBMGA001339-PA|IPR008518|Protein of unknown
function DUF800
         (198 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   6.0  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   6.0  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    21   7.9  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    21   7.9  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              21   7.9  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    21   7.9  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    21   7.9  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
          protein.
          Length = 411

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)

Query: 9  ATGDIIDDETAPNGM 23
          + GD I++   PNGM
Sbjct: 42 SNGDYIEENNMPNGM 56


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 10/29 (34%), Positives = 11/29 (37%)

Query: 50  HVGTKAPPREIQLDNAVLPTDPGMVRVST 78
           H G    P E+ L     PT P    V T
Sbjct: 280 HYGHHPDPGEVDLPPETQPTPPSATLVGT 308


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 109 IKTYRSQGDGARTTTPRPDHFNESIMTESRLVLRINGFRDPTP 151
           + T  S+ D   TT P     NE+    SR V  +  F +  P
Sbjct: 124 LTTVSSEADSDVTTLPTLIGKNETSTQSSRSVESVEDFDNEIP 166


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 109 IKTYRSQGDGARTTTPRPDHFNESIMTESRLVLRINGFRDPTP 151
           + T  S+ D   TT P     NE+    SR V  +  F +  P
Sbjct: 172 LTTVSSEADSDVTTLPTLIGKNETSTQSSRSVESVEDFDNEIP 214


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/30 (33%), Positives = 17/30 (56%)

Query: 4   PQRIKATGDIIDDETAPNGMVSGWDYANEK 33
           PQ IKA  +++ DE +   +VS     +E+
Sbjct: 81  PQGIKAVMELLIDENSVKQLVSDCSTISEE 110


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 109 IKTYRSQGDGARTTTPRPDHFNESIMTESRLVLRINGFRDPTP 151
           + T  S+ D   TT P     NE+    SR V  +  F +  P
Sbjct: 172 LTTVSSEADSDVTTLPTLIGKNETSTQSSRSVESVEDFDNEIP 214


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 109 IKTYRSQGDGARTTTPRPDHFNESIMTESRLVLRINGFRDPTP 151
           + T  S+ D   TT P     NE+    SR V  +  F +  P
Sbjct: 172 LTTVSSEADSDVTTLPTLIGKNETSTQSSRSVESVEDFDNEIP 214


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.137    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,881
Number of Sequences: 429
Number of extensions: 3296
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 198
length of database: 140,377
effective HSP length: 55
effective length of query: 143
effective length of database: 116,782
effective search space: 16699826
effective search space used: 16699826
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 42 (21.0 bits)