Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001338-TA|BGIBMGA001338-PA|IPR002213|UDP-
glucuronosyl/UDP-glucosyltransferase
         (365 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    27   0.21 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    26   0.37 
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    23   3.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   6.0  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 27.1 bits (57), Expect = 0.21
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 80  ALYNVSVLLVNSHPAFAPPLSLP-------PNVVEIAGYHIDPKTPPLPKDLQSI 127
           +++  S LL+ SH   A  LSLP       P ++ +A     P +PP P +L ++
Sbjct: 29  SMFTPSQLLMASHLMAASRLSLPTNPAFFHPGLLPLAWQANSPPSPPAPSELPAL 83


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 26.2 bits (55), Expect = 0.37
 Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 6/101 (5%)

Query: 47  SDWLDRPKTVAFYESLFAPLATARGVALPPFEEALYNVSVLLVNSHPAFAPPLSLPPNVV 106
           SD L +P+  +    L    A  RGV        L  V V L  + PA A    LPP   
Sbjct: 90  SDSLVQPRCPSGESMLSERAALLRGVP------TLSPVGVALPPTLPAAAAAALLPPQTA 143

Query: 107 EIAGYHIDPKTPPLPKDLQSILDSSPQGVVYFSMGSVLKSS 147
            +A Y          +    ++ +SP G    S+  ++ SS
Sbjct: 144 AMAAYLNAAAVAAAAQQSHRLMMTSPSGFNRASVSPLISSS 184


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 112 HIDPKTPPLPKDLQSILDSSPQGVVYF 138
           H+  K P LP+  + +LD++  G V +
Sbjct: 13  HLRFKAPELPEHWEGVLDATKPGNVCY 39


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 9/21 (42%), Positives = 11/21 (52%)

Query: 114 DPKTPPLPKDLQSILDSSPQG 134
           D + PP+PKD     D  P G
Sbjct: 623 DYEMPPVPKDFPQCGDYVPSG 643


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.135    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,653
Number of Sequences: 317
Number of extensions: 3641
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 4
length of query: 365
length of database: 114,650
effective HSP length: 58
effective length of query: 307
effective length of database: 96,264
effective search space: 29553048
effective search space used: 29553048
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)