BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001338-TA|BGIBMGA001338-PA|IPR002213|UDP- glucuronosyl/UDP-glucosyltransferase (365 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 32 0.15 SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 31 0.34 SPAC22A12.09c |sap114||splicing factor Sap114|Schizosaccharomyce... 29 1.4 SPAC56E4.02c |alg13||N-acetylglucosaminyldiphosphodolichol N-ace... 27 4.2 SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 27 4.2 SPBP4H10.21c |sld5||GINS complex subunit Sld5|Schizosaccharomyce... 27 5.5 SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr... 26 7.3 >SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosaccharomyces pombe|chr 2|||Manual Length = 830 Score = 31.9 bits (69), Expect = 0.15 Identities = 36/111 (32%), Positives = 48/111 (43%), Gaps = 8/111 (7%) Query: 61 SLFAPLATARGVALPPFEEALYNVSVLL-VNSHPAFAPPLSLPPNVVEIAGYHIDPKTPP 119 S F L + P +E L N V + SHPAF P + + V G ID K P Sbjct: 666 SRFDILQVVKDTVNPEIDEQLANFVVSSHIRSHPAFDPNMDVLKKVPTETG--IDAK--P 721 Query: 120 LPKDLQSILDSSPQGVVYFSMGSV--LKSSKLSEQTRRELLDVFGSIPQTV 168 +P+DL + V+ + + K S+L RRE L GS P TV Sbjct: 722 IPQDLLRKYIHFAREKVFPRLQQMDEEKISRLYSDMRRESL-ATGSYPITV 771 >SPAC4G9.04c |||cleavage and polyadenylation specificity factor |Schizosaccharomyces pombe|chr 1|||Manual Length = 638 Score = 30.7 bits (66), Expect = 0.34 Identities = 42/163 (25%), Positives = 65/163 (39%), Gaps = 14/163 (8%) Query: 45 VISDWLDRPKTVAFYESLFAPLATAR--GVALPPFEEALYNVSVLLVN-SHPAFAPPLSL 101 +++ W RP + E +F+P+ TA+ L L + S LL N S +F+ P+ Sbjct: 104 LLATWKQRPPNSSSLEPVFSPIVTAKIENALLKYKSTILRHQSPLLANTSISSFSAPIDA 163 Query: 102 PPNVVEI---AGYHIDPKTPPLPKDLQSILDSSPQGVVYFSMGSVLKSSKLSEQTRRELL 158 N P P +P Q I +SP S G + S LS+ R + Sbjct: 164 NINSYSSFSDPASSYKPSLPSVPFGFQHISGTSP------SPGFITLDSLLSDVNRMIVT 217 Query: 159 DV--FGSIPQTVLWKFEEDLQDLPKNVHIRSWMPQSSILAHPN 199 + F P + K ++ KNV S +P +LA N Sbjct: 218 EQARFIKNPYDNMAKKRFEILLQLKNVLSSSALPYDQLLAIKN 260 >SPAC22A12.09c |sap114||splicing factor Sap114|Schizosaccharomyces pombe|chr 1|||Manual Length = 481 Score = 28.7 bits (61), Expect = 1.4 Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 12/110 (10%) Query: 51 DRPKTVAFYESLFAPLATARGVALPPFEEALYNVSVLLVNSHPAFAPPLSLPPNVVEIAG 110 + P T +E + AP GV+LPP +L + ++S + +P P + Sbjct: 310 EAPPTAEPWEPISAPKKQEFGVSLPP---SLASPEKGGISSTTSVSPAAQASP----VLS 362 Query: 111 YHIDPKT-PPLPKDLQSILDSSPQGVVYFSMGSVLKSSKLSEQTRRELLD 159 PK P+PK Q P + FS G ++ +++L E R +LLD Sbjct: 363 TTTQPKVQKPVPKAFQ---PKVPMEISPFS-GELVPATELEEHMRLKLLD 408 >SPAC56E4.02c |alg13||N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase Alg13 |Schizosaccharomyces pombe|chr 1|||Manual Length = 162 Score = 27.1 bits (57), Expect = 4.2 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Query: 188 WMPQSSILAHPNMKVFITHGGLLSILETLHYGVPILAVP 226 + P+ H + + I+H G SIL+TL G +L VP Sbjct: 63 YAPEIESYIH-DASIVISHAGAGSILQTLRSGKRLLVVP 100 >SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster type |Schizosaccharomyces pombe|chr 2|||Manual Length = 827 Score = 27.1 bits (57), Expect = 4.2 Identities = 11/21 (52%), Positives = 14/21 (66%) Query: 72 VALPPFEEALYNVSVLLVNSH 92 + LPP+EEAL VS +N H Sbjct: 197 IQLPPYEEALSIVSQFFMNDH 217 >SPBP4H10.21c |sld5||GINS complex subunit Sld5|Schizosaccharomyces pombe|chr 2|||Manual Length = 214 Score = 26.6 bits (56), Expect = 5.5 Identities = 14/55 (25%), Positives = 27/55 (49%) Query: 246 SIEYKPDMAKDMKVALNEMLSDDSYYKRARYLSKIFGDKLVPPAKVISHYVKVAI 300 S+ PDM + +NE + ++ Y++ GD L+ VIS Y+++ + Sbjct: 156 SMVASPDMDTAVFCVVNESVEENFRVSENEYITLDKGDVLILRYSVISDYLRLGV 210 >SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr 2|||Manual Length = 1471 Score = 26.2 bits (55), Expect = 7.3 Identities = 12/34 (35%), Positives = 18/34 (52%) Query: 150 SEQTRRELLDVFGSIPQTVLWKFEEDLQDLPKNV 183 S+ R L + + ++ TV KFE D + LP V Sbjct: 1002 SQTARENLSNYYQALQMTVSEKFEYDTEQLPSRV 1035 Database: spombe Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.319 0.135 0.409 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,653,209 Number of Sequences: 5004 Number of extensions: 70093 Number of successful extensions: 208 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 204 Number of HSP's gapped (non-prelim): 7 length of query: 365 length of database: 2,362,478 effective HSP length: 74 effective length of query: 291 effective length of database: 1,992,182 effective search space: 579724962 effective search space used: 579724962 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.8 bits) S2: 54 (25.8 bits)
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