Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001338-TA|BGIBMGA001338-PA|IPR002213|UDP-
glucuronosyl/UDP-glucosyltransferase
         (365 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    22   9.5  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    22   9.5  

>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 10/37 (27%), Positives = 19/37 (51%)

Query: 153 TRRELLDVFGSIPQTVLWKFEEDLQDLPKNVHIRSWM 189
           T   L+   G I +  + KFE++ Q++ K     +W+
Sbjct: 23  TTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 59


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 10/37 (27%), Positives = 19/37 (51%)

Query: 153 TRRELLDVFGSIPQTVLWKFEEDLQDLPKNVHIRSWM 189
           T   L+   G I +  + KFE++ Q++ K     +W+
Sbjct: 23  TTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 59


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.135    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,403
Number of Sequences: 429
Number of extensions: 4252
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 2
length of query: 365
length of database: 140,377
effective HSP length: 59
effective length of query: 306
effective length of database: 115,066
effective search space: 35210196
effective search space used: 35210196
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)