GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001337-TA|BGIBMGA001337-PA|undefined
         (200 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   3.9  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   6.7  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   8.9  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 25  VFPIPSRSHNSLGKGIVD 42
           VFP+ +  H+  G GI+D
Sbjct: 190 VFPVDAPMHSPPGDGILD 207


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 10/28 (35%), Positives = 13/28 (46%)

Query: 45  LEAGHEVTWVTPYPPSELAKGLKIVDVS 72
           LE  H +    P PP  L     I+D+S
Sbjct: 257 LETFHTLEKCRPDPPQNLVINESIIDLS 284


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)

Query: 167 RSLLFRFGGAFSEALLL 183
           RSLL  FGGA +  L++
Sbjct: 365 RSLLTSFGGALTTFLVI 381


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.134    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,770
Number of Sequences: 317
Number of extensions: 1428
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 200
length of database: 114,650
effective HSP length: 54
effective length of query: 146
effective length of database: 97,532
effective search space: 14239672
effective search space used: 14239672
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 41 (20.6 bits)