Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001336-TA|BGIBMGA001336-PA|IPR014001|DEAD-like
helicases, N-terminal, IPR000629|ATP-dependent helicase, DEAD-box,
IPR014021|Helicase superfamily 1 and 2 ATP-binding, IPR014014|DEAD-box
RNA helicase Q motif, IPR013957|Protein of unknown function DUF1777,
IPR011545|DEAD/DEAH box helicase, N-terminal
(379 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 488 e-136
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 486 e-136
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 463 e-129
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 461 e-128
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 460 e-128
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 457 e-127
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 445 e-124
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 411 e-113
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 360 4e-98
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 344 3e-93
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 338 2e-91
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 337 2e-91
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 336 7e-91
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 328 2e-88
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 320 5e-86
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 319 9e-86
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 319 9e-86
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 316 8e-85
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 313 4e-84
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 309 7e-83
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 309 9e-83
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 302 8e-81
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 298 1e-79
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 293 4e-78
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 289 8e-77
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 280 5e-74
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 276 8e-73
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 275 1e-72
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 274 2e-72
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 273 4e-72
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 273 4e-72
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 273 6e-72
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 272 1e-71
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 268 2e-70
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 266 7e-70
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 265 2e-69
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 264 3e-69
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 264 3e-69
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 264 3e-69
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 262 1e-68
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 262 1e-68
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 261 2e-68
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 261 2e-68
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 258 1e-67
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 258 2e-67
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 257 3e-67
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 256 9e-67
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 255 1e-66
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 255 2e-66
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 255 2e-66
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 254 4e-66
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 250 3e-65
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 248 2e-64
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 248 2e-64
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 244 3e-63
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 243 7e-63
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 241 2e-62
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 241 3e-62
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 240 5e-62
UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helic... 239 6e-62
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 239 6e-62
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 234 2e-60
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 233 7e-60
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 231 2e-59
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 230 4e-59
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 230 4e-59
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 230 5e-59
UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family pr... 229 7e-59
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 229 1e-58
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 227 5e-58
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 225 1e-57
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w... 225 1e-57
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 224 3e-57
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 224 3e-57
UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, wh... 222 1e-56
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 221 2e-56
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 219 7e-56
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 219 7e-56
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 218 2e-55
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 217 3e-55
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 217 4e-55
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 217 4e-55
UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2; ... 217 5e-55
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 216 7e-55
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 214 4e-54
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 212 1e-53
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 212 1e-53
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 210 3e-53
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 210 5e-53
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 210 5e-53
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 209 1e-52
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 209 1e-52
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 207 4e-52
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 206 7e-52
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 205 1e-51
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 205 2e-51
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 203 5e-51
UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;... 202 1e-50
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 201 2e-50
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 201 3e-50
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 201 3e-50
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 200 4e-50
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 200 6e-50
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 199 8e-50
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 199 1e-49
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 198 1e-49
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 198 2e-49
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 198 3e-49
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 197 5e-49
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 197 5e-49
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 197 5e-49
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 196 6e-49
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 196 6e-49
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 196 8e-49
UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2; F... 196 8e-49
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 196 1e-48
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 195 1e-48
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 194 3e-48
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 194 3e-48
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 194 3e-48
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume... 193 6e-48
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 193 7e-48
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 193 7e-48
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 192 1e-47
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 192 1e-47
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 192 2e-47
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 190 4e-47
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 190 4e-47
UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;... 190 4e-47
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 190 7e-47
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 190 7e-47
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 189 1e-46
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 189 1e-46
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 188 2e-46
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 188 2e-46
UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 188 2e-46
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 187 5e-46
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 187 5e-46
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 186 8e-46
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 186 8e-46
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 186 1e-45
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 185 1e-45
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 185 2e-45
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 185 2e-45
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 184 3e-45
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 184 4e-45
UniRef50_Q240I5 Cluster: DEAD/DEAH box helicase family protein; ... 184 4e-45
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 183 6e-45
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 183 8e-45
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 182 1e-44
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 182 1e-44
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 182 1e-44
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 180 4e-44
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 180 4e-44
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 180 4e-44
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 180 4e-44
UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 180 6e-44
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 180 7e-44
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 179 1e-43
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 179 1e-43
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 178 2e-43
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 177 3e-43
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 177 4e-43
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 177 4e-43
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 177 4e-43
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 177 5e-43
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 177 5e-43
UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5; Tr... 177 5e-43
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 176 9e-43
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 175 1e-42
UniRef50_Q54DV7 Cluster: Putative uncharacterized protein; n=1; ... 175 2e-42
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 175 2e-42
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 175 2e-42
UniRef50_A2E9Y0 Cluster: DEAD/DEAH box helicase family protein; ... 174 4e-42
UniRef50_A2D755 Cluster: DEAD/DEAH box helicase family protein; ... 174 4e-42
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 173 5e-42
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 173 5e-42
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 173 5e-42
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 173 5e-42
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 173 6e-42
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 173 6e-42
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 173 6e-42
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 173 8e-42
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 173 8e-42
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 173 8e-42
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 172 1e-41
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 172 1e-41
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 172 1e-41
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 171 2e-41
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 171 2e-41
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 171 3e-41
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 171 3e-41
UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium ... 171 3e-41
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 171 3e-41
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 170 4e-41
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 170 4e-41
UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 - Lei... 170 4e-41
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 170 6e-41
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 169 8e-41
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 169 8e-41
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 169 8e-41
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 169 8e-41
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 169 8e-41
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 169 8e-41
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 169 1e-40
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 169 1e-40
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 169 1e-40
UniRef50_A2EPC6 Cluster: Type III restriction enzyme, res subuni... 169 1e-40
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 169 1e-40
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 168 2e-40
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 168 2e-40
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 168 2e-40
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 168 2e-40
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 168 2e-40
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 167 3e-40
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 167 3e-40
UniRef50_Q9W3Y5 Cluster: Putative ATP-dependent RNA helicase CG1... 167 3e-40
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 167 4e-40
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 167 6e-40
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 167 6e-40
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 167 6e-40
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 167 6e-40
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 167 6e-40
UniRef50_Q5ENJ0 Cluster: Chloroplast RNA helicase; n=1; Heteroca... 167 6e-40
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 166 7e-40
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 166 7e-40
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 165 1e-39
UniRef50_Q5CWD0 Cluster: Prp5p C terminal KH. eIF4A-1-family RNA... 165 2e-39
UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n... 165 2e-39
UniRef50_Q9GV07 Cluster: Vasa-related protein PlVAS1; n=1; Duges... 164 3e-39
UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep: ... 164 3e-39
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 164 4e-39
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 164 4e-39
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 164 4e-39
UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 164 4e-39
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 164 4e-39
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 163 5e-39
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 163 5e-39
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 163 5e-39
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 163 7e-39
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 163 7e-39
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 163 9e-39
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 163 9e-39
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 163 9e-39
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 162 1e-38
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 162 1e-38
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 162 1e-38
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 162 2e-38
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 162 2e-38
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 162 2e-38
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 162 2e-38
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 161 2e-38
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 161 2e-38
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 161 2e-38
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 161 2e-38
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 161 3e-38
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 161 3e-38
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 161 3e-38
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 161 4e-38
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 161 4e-38
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 161 4e-38
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 160 5e-38
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 160 5e-38
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 160 5e-38
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 160 5e-38
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 160 6e-38
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 160 6e-38
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 160 6e-38
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 160 6e-38
UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1; ... 160 6e-38
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 159 1e-37
UniRef50_Q54CD6 Cluster: Putative uncharacterized protein; n=1; ... 159 1e-37
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 159 1e-37
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 158 2e-37
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 158 2e-37
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 158 2e-37
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 158 3e-37
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 158 3e-37
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 158 3e-37
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 157 3e-37
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 157 3e-37
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 157 4e-37
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 157 4e-37
UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA hel... 157 4e-37
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 157 6e-37
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 157 6e-37
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 156 8e-37
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 156 8e-37
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 156 8e-37
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 156 8e-37
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 156 1e-36
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 156 1e-36
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 156 1e-36
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 155 1e-36
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 155 1e-36
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 155 1e-36
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 155 1e-36
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 155 2e-36
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 155 2e-36
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 155 2e-36
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 155 2e-36
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 155 2e-36
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 155 2e-36
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 155 2e-36
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 155 2e-36
UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1; Ostreo... 154 3e-36
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 154 4e-36
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 154 4e-36
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 153 6e-36
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 153 6e-36
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 153 6e-36
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re... 153 7e-36
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 153 1e-35
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 153 1e-35
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 153 1e-35
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 153 1e-35
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 153 1e-35
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 152 1e-35
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 152 2e-35
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 151 2e-35
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 151 3e-35
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 151 3e-35
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 151 4e-35
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 151 4e-35
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 151 4e-35
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 151 4e-35
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 151 4e-35
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 150 5e-35
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 150 5e-35
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 150 7e-35
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 150 7e-35
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 150 7e-35
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 150 7e-35
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 150 7e-35
UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein; ... 149 9e-35
UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3; Ostreoc... 149 9e-35
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 149 9e-35
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 149 9e-35
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 149 1e-34
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 149 1e-34
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 149 2e-34
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 149 2e-34
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 149 2e-34
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 149 2e-34
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 149 2e-34
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 148 2e-34
UniRef50_P23394 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 148 2e-34
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 148 3e-34
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 148 3e-34
UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2; Corynebacte... 147 4e-34
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 147 4e-34
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 147 5e-34
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 147 5e-34
UniRef50_Q015I7 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 147 5e-34
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 146 6e-34
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 146 6e-34
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 146 6e-34
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 146 6e-34
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 146 6e-34
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 146 8e-34
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 146 8e-34
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 146 8e-34
UniRef50_Q4UDY7 Cluster: RNA helicase, putative; n=2; Theileria|... 146 8e-34
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 146 1e-33
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 146 1e-33
UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7; ... 146 1e-33
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 146 1e-33
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 145 1e-33
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 145 1e-33
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 145 1e-33
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 145 2e-33
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 145 2e-33
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 145 2e-33
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 145 2e-33
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 144 3e-33
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 144 3e-33
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 144 3e-33
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 144 3e-33
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 144 3e-33
UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole... 144 3e-33
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 144 3e-33
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 144 3e-33
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 144 3e-33
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 144 3e-33
UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. ... 144 3e-33
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 144 3e-33
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 144 4e-33
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 143 6e-33
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 143 6e-33
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 143 6e-33
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 143 8e-33
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 143 8e-33
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 143 8e-33
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 143 8e-33
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 143 8e-33
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 143 8e-33
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 142 1e-32
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 142 1e-32
UniRef50_A7QRK7 Cluster: Chromosome undetermined scaffold_151, w... 142 1e-32
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 142 2e-32
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 142 2e-32
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 142 2e-32
UniRef50_Q5VRY0 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 142 2e-32
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 142 2e-32
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 141 2e-32
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 141 3e-32
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 141 3e-32
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 140 4e-32
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 140 4e-32
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 140 5e-32
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 140 5e-32
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 140 5e-32
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 140 7e-32
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 140 7e-32
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 140 7e-32
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 140 7e-32
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 140 7e-32
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 140 7e-32
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 139 1e-31
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 139 1e-31
UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1; Dug... 139 1e-31
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 139 1e-31
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 139 1e-31
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 139 1e-31
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 139 1e-31
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 139 1e-31
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 138 2e-31
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 138 3e-31
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 138 3e-31
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 138 3e-31
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 137 4e-31
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 137 4e-31
UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gamb... 137 5e-31
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 137 5e-31
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 136 7e-31
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 136 7e-31
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ... 136 1e-30
UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; ... 136 1e-30
UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;... 136 1e-30
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 136 1e-30
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 136 1e-30
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 135 2e-30
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 135 2e-30
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 135 2e-30
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 135 2e-30
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 135 2e-30
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 135 2e-30
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 134 3e-30
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 134 3e-30
UniRef50_Q5CWY8 Cluster: Rok1p, eIF4A-1-family RNA SFII helicase... 134 4e-30
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 134 5e-30
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 134 5e-30
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 134 5e-30
UniRef50_A5DIX5 Cluster: ATP-dependent RNA helicase ROK1; n=2; P... 134 5e-30
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 133 6e-30
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 133 6e-30
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 133 6e-30
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 133 8e-30
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 133 8e-30
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 133 8e-30
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 133 8e-30
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 133 8e-30
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 132 1e-29
UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putativ... 132 1e-29
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 132 1e-29
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 132 1e-29
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 132 1e-29
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 132 1e-29
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 132 1e-29
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 132 1e-29
UniRef50_Q61JF4 Cluster: Putative uncharacterized protein CBG098... 132 1e-29
UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=... 132 1e-29
UniRef50_UPI0000498886 Cluster: DEAD/DEAH box helicase; n=1; Ent... 132 2e-29
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 132 2e-29
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 132 2e-29
UniRef50_A7PDS5 Cluster: Chromosome chr11 scaffold_13, whole gen... 131 3e-29
UniRef50_A7P0R7 Cluster: Chromosome chr19 scaffold_4, whole geno... 131 3e-29
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 131 3e-29
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 131 3e-29
UniRef50_UPI0000E49031 Cluster: PREDICTED: similar to DEAD/DEXH ... 131 3e-29
UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=... 131 3e-29
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 131 3e-29
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 131 3e-29
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 131 3e-29
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 130 4e-29
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 130 4e-29
UniRef50_A4RUB4 Cluster: Predicted protein; n=2; Ostreococcus|Re... 130 4e-29
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 130 4e-29
UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n... 130 4e-29
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 130 4e-29
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 130 4e-29
UniRef50_Q7XJN0 Cluster: DEAD-box ATP-dependent RNA helicase 17;... 130 4e-29
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 130 6e-29
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 130 6e-29
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 130 6e-29
UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family pr... 130 8e-29
UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lambli... 130 8e-29
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas... 130 8e-29
UniRef50_A2E5C2 Cluster: DEAD/DEAH box helicase family protein; ... 130 8e-29
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 129 1e-28
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 488 bits (1203), Expect = e-136
Identities = 227/330 (68%), Positives = 268/330 (81%)
Query: 50 NPGASLRKPKWDLSRLKPFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLT 109
N GA+LR KW L PF+KDFY P + E+DV+ + ++ EITLKGRNIP+P++
Sbjct: 64 NNGATLRTLKWTSEELTPFEKDFYKPSEFISNLSETDVKGYLAKLEITLKGRNIPRPSME 123
Query: 110 FDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVH 169
F++ G PDY+++E +K GF+KPT IQAQG PIALSG DMVGIA TGSGKTL+YI PA+VH
Sbjct: 124 FEQGGLPDYILEEANKQGFSKPTAIQAQGMPIALSGRDMVGIAQTGSGKTLAYIAPALVH 183
Query: 170 INNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLD 229
I +Q + RGDGPIALVLAPTRELAQQIQ+V F +NTC+FGGAPKGPQ RDL+
Sbjct: 184 ITHQDQLRRGDGPIALVLAPTRELAQQIQQVATDFGQRINANNTCVFGGAPKGPQIRDLE 243
Query: 230 AGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQT 289
G EIVIATPGRL+DFLE G TNL+RCTYLVLDEADRMLDMGFEPQIRKI+ QIRPDRQ
Sbjct: 244 RGAEIVIATPGRLIDFLERGITNLRRCTYLVLDEADRMLDMGFEPQIRKIMGQIRPDRQV 303
Query: 290 LMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKE 349
LMWSATWP+EV++LA EFL DY+QIN+GSL L+ANHNILQI+DVC +YEK+ KL LL E
Sbjct: 304 LMWSATWPKEVRNLAEEFLNDYIQINIGSLNLSANHNILQIVDVCEDYEKDQKLMKLLTE 363
Query: 350 IMAEKENKTIIFIETKRRVDDITRKMKRDG 379
I AE E KTIIF+ETKRRVDDITR + R+G
Sbjct: 364 ISAENETKTIIFVETKRRVDDITRNINRNG 393
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 486 bits (1198), Expect = e-136
Identities = 225/330 (68%), Positives = 267/330 (80%)
Query: 50 NPGASLRKPKWDLSRLKPFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLT 109
N GA L K W L PF+K+FY P V R + E + + NEIT+KG +P P++
Sbjct: 99 NHGAHLPKIVWSEVNLTPFRKNFYKPCDSVLARTVGETETFLTSNEITIKGDQVPTPSIE 158
Query: 110 FDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVH 169
F+E GFPDYVM+EI K GFAKPT IQAQGWPIA+SG D+VG+A TGSGKTL+Y+LPA+VH
Sbjct: 159 FEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVH 218
Query: 170 INNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLD 229
INNQP+ RGDGPIALVLAPTRELAQQIQ+V +F + + + NTC+FGGAPKG QARDL+
Sbjct: 219 INNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLE 278
Query: 230 AGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQT 289
GVEIVIATPGRL+DFLE G T+LKRCTYLVLDEADRMLDMGFEPQIRKI++QIRPDRQ
Sbjct: 279 RGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPDRQV 338
Query: 290 LMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKE 349
LMWSATWP+EV+ LA EFL +Y+Q+N+GSL L+ANHNILQI+DVC E EK KL LL +
Sbjct: 339 LMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLIKLLTD 398
Query: 350 IMAEKENKTIIFIETKRRVDDITRKMKRDG 379
I AE E KTIIF+ETK+RVD+ITR + R G
Sbjct: 399 ISAENETKTIIFVETKKRVDEITRNISRQG 428
>UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 718
Score = 463 bits (1142), Expect = e-129
Identities = 214/328 (65%), Positives = 263/328 (80%)
Query: 52 GASLRKPKWDLSRLKPFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFD 111
G +LR +WD +L+PFKKDF+ P V +R ++V + +NEIT+ G+N+P P + F
Sbjct: 45 GENLRPVRWDQVKLEPFKKDFFTPASSVLERSRTEVCQYLDKNEITMIGKNVPAPIMQFG 104
Query: 112 EAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHIN 171
E+GFP +DE+ + GF +PT IQA GW IA+SG DMVGIA TGSGKTL+YILPA++HI+
Sbjct: 105 ESGFPSVFLDEMGRQGFQEPTSIQAVGWSIAMSGRDMVGIAKTGSGKTLAYILPALIHIS 164
Query: 172 NQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAG 231
NQP+ RGDGPIALVLAPTRELAQQIQ+VC+ F I NTC+FGGA K PQA DL G
Sbjct: 165 NQPRLLRGDGPIALVLAPTRELAQQIQQVCNDFGRRMSIMNTCIFGGASKHPQADDLRRG 224
Query: 232 VEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLM 291
VEIVIATPGRL+DFLESG TNL+R TYLVLDEADRMLDMGFEPQIRKII QIRPDRQ LM
Sbjct: 225 VEIVIATPGRLIDFLESGTTNLRRTTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQVLM 284
Query: 292 WSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIM 351
WSATWP+E++ LA EFL++Y+QIN+GSL LAAN NI+QII+ C EYEKET+L LL E+
Sbjct: 285 WSATWPKEIRKLAEEFLREYIQINIGSLNLAANENIMQIIECCEEYEKETRLFKLLTELS 344
Query: 352 AEKENKTIIFIETKRRVDDITRKMKRDG 379
+ ++K+IIF+ETKR+VD IT +KR+G
Sbjct: 345 QQGDSKSIIFVETKRKVDQITNVIKRNG 372
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 461 bits (1137), Expect = e-128
Identities = 219/331 (66%), Positives = 263/331 (79%), Gaps = 4/331 (1%)
Query: 51 PGASLRKPKWDLSRLKPFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTF 110
PG L KP W L+PF+KDFYVPH +V R +V+A+R +IT+ G ++P P+ F
Sbjct: 174 PGQGLVKPIW--KDLEPFEKDFYVPHPNVMARTPEEVQAFRERMQITVMGNSVPHPSQDF 231
Query: 111 DEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHI 170
+E FPD+VM+EI+KMGF PT IQAQGWPIALSG D+VGIA TGSGKTL+Y+LP IVHI
Sbjct: 232 EEGNFPDFVMNEINKMGFPNPTAIQAQGWPIALSGRDLVGIAQTGSGKTLAYMLPGIVHI 291
Query: 171 NNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSK--IHNTCLFGGAPKGPQARDL 228
+Q RG+GP+ LVLAPTRELAQQIQ V F SK I TC+FGGA KGPQ RDL
Sbjct: 292 AHQKPLQRGEGPVVLVLAPTRELAQQIQTVVRDFGTHSKPLIRYTCIFGGALKGPQVRDL 351
Query: 229 DAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 288
+ GVE+VIATPGRL+DFLE G TNL+RCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ
Sbjct: 352 ERGVEVVIATPGRLIDFLERGITNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 411
Query: 289 TLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLK 348
LMWSATWP+EVQ+LA +FL DY+QIN+GSL L+ANHNI QI+DVC E EKE KL +LLK
Sbjct: 412 VLMWSATWPKEVQALAEDFLHDYIQINIGSLNLSANHNIHQIVDVCEEGEKEGKLLSLLK 471
Query: 349 EIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
EI ++ +K IIF+ETK++V+D+ + + RDG
Sbjct: 472 EISSDVNSKIIIFVETKKKVEDLLKNIVRDG 502
>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
- Gibberella zeae (Fusarium graminearum)
Length = 555
Score = 460 bits (1135), Expect = e-128
Identities = 208/328 (63%), Positives = 264/328 (80%)
Query: 52 GASLRKPKWDLSRLKPFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFD 111
G+ L+ +WD++ L F+K FY H DVE R ++DVEA+R ++++T+ G N+PKP TFD
Sbjct: 78 GSGLKNQEWDINSLPKFEKSFYKEHPDVETRSDADVEAFRRKHQMTIAGSNVPKPVETFD 137
Query: 112 EAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHIN 171
EAGFP YVMDE+ GF PT IQ+QGWP+ALSG D+VGIA TGSGKTL+Y LP+IVHIN
Sbjct: 138 EAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPSIVHIN 197
Query: 172 NQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAG 231
QP + GDGPI LVLAPTRELA QIQE KF +S+I NTC++GG PKGPQ RDL G
Sbjct: 198 AQPLLAPGDGPIVLVLAPTRELAVQIQEEMKKFGRSSRIRNTCVYGGVPKGPQIRDLSRG 257
Query: 232 VEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLM 291
VE+ IATPGRL+D LE+G+TNL+R TYLVLDEADRMLDMGFEPQIRKII QIRPDRQTLM
Sbjct: 258 VEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLM 317
Query: 292 WSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIM 351
WSATWP+EV++LAS+FL+D++Q+N+GS++LAANH I QI++V E EK ++ ++++M
Sbjct: 318 WSATWPKEVRALASDFLQDFIQVNIGSMELAANHRITQIVEVVTEMEKRDRMIKHMEKVM 377
Query: 352 AEKENKTIIFIETKRRVDDITRKMKRDG 379
KENK +IF+ TKR D+ITR +++DG
Sbjct: 378 ENKENKILIFVGTKRVADEITRFLRQDG 405
>UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 639
Score = 457 bits (1127), Expect = e-127
Identities = 219/325 (67%), Positives = 253/325 (77%), Gaps = 1/325 (0%)
Query: 55 LRKPKWDLSRLKPFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAG 114
L+ W+ +L+ + Y P +D +R E ++ WR EIT KGR++P P LTF+E G
Sbjct: 35 LKPVNWNHQKLESVTRLSYRPKVDF-RRSEREISEWRKTKEITTKGRDVPDPALTFEEVG 93
Query: 115 FPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQP 174
FP + DE F PTPIQ+QGWPIA+SG DMVGIA TGSGKTLSY+LPA++HI+ Q
Sbjct: 94 FPAEIADEWRYAEFTTPTPIQSQGWPIAMSGRDMVGIAKTGSGKTLSYLLPALMHIDQQS 153
Query: 175 KSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEI 234
+ RGDGPIAL+LAPTRELAQQI++V D F KI NTCLFGG K Q DL GVEI
Sbjct: 154 RLRRGDGPIALILAPTRELAQQIKQVTDDFGRAMKIKNTCLFGGGAKRQQGDDLKYGVEI 213
Query: 235 VIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 294
VIATPGRL+DFL S TNL+RC+YLVLDEADRMLDMGFEPQIR IIEQIRPD QTLMWSA
Sbjct: 214 VIATPGRLIDFLSSEHTNLRRCSYLVLDEADRMLDMGFEPQIRAIIEQIRPDHQTLMWSA 273
Query: 295 TWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEK 354
TWP V L ++LKDY+QINVGSL+LAANHNILQIIDVC E+EKE KLS LL+EIMAEK
Sbjct: 274 TWPDAVSRLVKDYLKDYIQINVGSLKLAANHNILQIIDVCQEHEKEAKLSILLREIMAEK 333
Query: 355 ENKTIIFIETKRRVDDITRKMKRDG 379
E KTIIFIETK+RVDDITRK+ RDG
Sbjct: 334 ECKTIIFIETKKRVDDITRKVLRDG 358
>UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9;
Eukaryota|Rep: ATP-dependent RNA helicase p62 -
Drosophila melanogaster (Fruit fly)
Length = 719
Score = 445 bits (1097), Expect = e-124
Identities = 211/321 (65%), Positives = 251/321 (78%), Gaps = 3/321 (0%)
Query: 61 DLSRLKPFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVM 120
D S L PFKK+FY H +V R +V+ +R E EIT++G+ +P P F E PDYVM
Sbjct: 235 DFSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRGQ-VPNPIQDFSEVHLPDYVM 293
Query: 121 DEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGD 180
EI + G+ PT IQAQGWPIA+SG + VGIA TGSGKTL YILPAIVHINNQ RGD
Sbjct: 294 KEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRGD 353
Query: 181 GPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPG 240
GPIALVLAPTRELAQQIQ+V +F ++S + NTC+FGGAPKG Q RDL G EIVIATPG
Sbjct: 354 GPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPG 413
Query: 241 RLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREV 300
RL+DFL +G TNLKRCTYLVLDEADRMLDMGFEPQIRKI+ QIRPDRQTLMWSATWP+EV
Sbjct: 414 RLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEV 473
Query: 301 QSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEI--MAEKENKT 358
+ LA +FL +Y+QIN+GSL+L+ANHNI Q++DVC E+ KE KL TLL +I +E K
Sbjct: 474 KQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESPGKI 533
Query: 359 IIFIETKRRVDDITRKMKRDG 379
IIF+ETKRRVD++ R ++ G
Sbjct: 534 IIFVETKRRVDNLVRFIRSFG 554
>UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;
n=11; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
30 - Oryza sativa subsp. japonica (Rice)
Length = 666
Score = 411 bits (1012), Expect = e-113
Identities = 193/326 (59%), Positives = 245/326 (75%), Gaps = 2/326 (0%)
Query: 54 SLRKPKWDLSRLKPFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEA 113
SL PK D L PF+K+FYV V+ + DV +R + +IT++G ++PKP F EA
Sbjct: 197 SLSLPKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEA 256
Query: 114 GFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQ 173
FPDY M I K GF +PTPIQ+QGWP+AL G DM+GIA TGSGKTLSY+LP +VH+ Q
Sbjct: 257 NFPDYCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQ 316
Query: 174 PKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVE 233
P+ +GDGPI L+LAPTRELA QIQ+ KF + S+ +TC++GGAPKGPQ RDL GVE
Sbjct: 317 PRLEQGDGPIVLILAPTRELAVQIQQESGKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVE 376
Query: 234 IVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWS 293
IVIATPGRL+D LE G TNL+R TYLVLDEADRMLDMGFEPQIRKI+ QIRPDRQTL WS
Sbjct: 377 IVIATPGRLIDMLEGGHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWS 436
Query: 294 ATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAE 353
ATWPREV+SLA +FL++ ++ +GS L ANH+I QII+V E+EK +LS LL ++M
Sbjct: 437 ATWPREVESLARQFLQNPYKVIIGSPDLKANHSIQQIIEVISEHEKYPRLSKLLSDLM-- 494
Query: 354 KENKTIIFIETKRRVDDITRKMKRDG 379
++ +IF +TK+ D +TR+++ DG
Sbjct: 495 DGSRILIFFQTKKDCDKVTRQLRMDG 520
>UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3;
Aconoidasida|Rep: RNA helicase, putative - Theileria
parva
Length = 635
Score = 360 bits (885), Expect = 4e-98
Identities = 180/332 (54%), Positives = 230/332 (69%), Gaps = 4/332 (1%)
Query: 50 NPGASLRKPKWDLSRLKPFKKDFYVPHLDVEKRPESDVEAWRSENEITL-KGRNIPKPTL 108
N GA L+ W+ L F+K+FYV H +V+ + + + R EIT+ GR++PKP +
Sbjct: 151 NLGAGLQPVNWNQIELVKFEKNFYVEHPEVKAMTQQEADEIRRAKEITVVHGRDVPKPVV 210
Query: 109 TFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIV 168
F+ FP Y++ I+ GF +PTPIQ Q WPIALSG DM+GIA TGSGKTL+++LPAIV
Sbjct: 211 KFEYTSFPRYILSSIEAAGFKEPTPIQVQSWPIALSGRDMIGIAETGSGKTLAFLLPAIV 270
Query: 169 HINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDL 228
HIN Q GDGPI LVLAPTRELA+QI+E F +SK+ + +GG PK Q L
Sbjct: 271 HINAQALLRPGDGPIVLVLAPTRELAEQIKETALVFGRSSKLKTSVAYGGVPKRFQTIAL 330
Query: 229 DAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 288
GVEI+IA PGRL+DFLES TNL+R TYLVLDEADRMLDMGFEPQIRKI+ QIRPDRQ
Sbjct: 331 RRGVEILIACPGRLIDFLESSVTNLRRVTYLVLDEADRMLDMGFEPQIRKIVGQIRPDRQ 390
Query: 289 TLMWSATWPREVQSLASEFLK-DYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLL 347
TLM+SATWP+EV +L+ L + + +N+GSL L HNI Q + + E EK KL LL
Sbjct: 391 TLMFSATWPKEVIALSRSLLSHEVVHVNIGSLDLTTCHNIEQNVFILEEREKRVKLKELL 450
Query: 348 KEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
K++M K +IF ETK+ D +TR+++ DG
Sbjct: 451 KKLM--DGGKILIFSETKKGADTLTRELRLDG 480
>UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 523
Score = 344 bits (845), Expect = 3e-93
Identities = 175/319 (54%), Positives = 222/319 (69%), Gaps = 28/319 (8%)
Query: 61 DLSRLKPFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVM 120
DL L F+K+FYV V E +VEA+R EIT++GR++PKP F + GFP+YV+
Sbjct: 46 DLDGLPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVL 105
Query: 121 DEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGD 180
EI K GF +PTPIQ+QGWP+AL G D++GIA TGSGKTL+Y+LPAIVH+N QP + GD
Sbjct: 106 QEITKAGFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGD 165
Query: 181 GPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPG 240
GPI LVLAPTRELA QIQ+ KF GVEIVIATPG
Sbjct: 166 GPIVLVLAPTRELAVQIQQEATKF--------------------------GVEIVIATPG 199
Query: 241 RLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREV 300
RL+D +ES TNL+R TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSATWP+EV
Sbjct: 200 RLIDMIESHHTNLRRITYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEV 259
Query: 301 QSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTII 360
+ LA FL D ++ +GS +L ANH I Q +++ E +K KL LL++IM ++ +I
Sbjct: 260 EQLARNFLFDPYKVIIGSEELKANHAISQHVEILSESQKYNKLVNLLEDIM--DGSRILI 317
Query: 361 FIETKRRVDDITRKMKRDG 379
F++TK+ D ITR+++ DG
Sbjct: 318 FMDTKKGCDQITRQLRMDG 336
>UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3;
Eukaryota|Rep: Helicase, truncated, putative -
Plasmodium falciparum (isolate 3D7)
Length = 352
Score = 338 bits (830), Expect = 2e-91
Identities = 165/284 (58%), Positives = 202/284 (71%), Gaps = 2/284 (0%)
Query: 50 NPGASLRKPKWDLSRLKPFKKDFYVPHLDVEKRPESDVEAWRSENEIT-LKGRNIPKPTL 108
N G +L W L PF+K+FY H D+ K +V+ R +++IT L+G N+PKP +
Sbjct: 54 NYGKNLAPIDWKTINLVPFEKNFYKEHEDISKLSTKEVKEIRDKHKITILEGENVPKPVV 113
Query: 109 TFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIV 168
+ ++ GFPDYV+ + PTPIQ QGWPIALSG DM+G A TGSGKTL++ILPA V
Sbjct: 114 SINKIGFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAFV 173
Query: 169 HINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDL 228
HI QP GDGPI LVLAPTRELA+QI++ C KF+ SKI NTC +GG PK Q L
Sbjct: 174 HILAQPNLKYGDGPIVLVLAPTRELAEQIRQECIKFSTESKIRNTCAYGGVPKSGQIYAL 233
Query: 229 DAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 288
GV I+IA PGRL+D LE TNL R TYLVLDEAD+MLDMGFE QIRKI++QIRPDRQ
Sbjct: 234 KQGVHILIACPGRLIDLLEQNVTNLMRVTYLVLDEADKMLDMGFELQIRKIVDQIRPDRQ 293
Query: 289 TLMWSATWPREVQSLASEFLKDY-LQINVGSLQLAANHNILQII 331
TLMWSATWP+EVQ+LA + K+ +Q+NVGSL L A +I Q I
Sbjct: 294 TLMWSATWPKEVQALAKDLCKEQPIQVNVGSLTLTACRSIKQEI 337
>UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP2 -
Encephalitozoon cuniculi
Length = 495
Score = 337 bits (829), Expect = 2e-91
Identities = 162/312 (51%), Positives = 211/312 (67%), Gaps = 3/312 (0%)
Query: 68 FKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMG 127
F+K+FY + + S+V ++R NE+ +KG N+P P F+EAGF V+ + + G
Sbjct: 47 FQKNFYQEAESISRMTPSEVSSFRKTNEMIVKGTNVPHPIQKFEEAGFSSEVVSSLVEKG 106
Query: 128 FAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVL 187
F++PT IQ QGWP+ALSG DMVGIA TGSGKTLS+ILPA+VH +Q RGDGPI LVL
Sbjct: 107 FSEPTAIQGQGWPMALSGRDMVGIAQTGSGKTLSFILPALVHAKDQQPLRRGDGPIVLVL 166
Query: 188 APTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLE 247
APTREL QI++V D+F + +T ++GGA PQ R L G E+VIATPGRL+D +
Sbjct: 167 APTRELVMQIKKVVDEFCGMFNLRSTAVYGGASSQPQIRALHEGAEVVIATPGRLIDLHD 226
Query: 248 SGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEF 307
G L R T+LVLDEADRMLDMGFEPQ+RKII + +RQTLMWSATWPREV+ LA +
Sbjct: 227 QGHAPLSRVTFLVLDEADRMLDMGFEPQLRKIIPKTNANRQTLMWSATWPREVRGLAESY 286
Query: 308 LKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRR 367
+ +Y+Q+ VG+ +L N I QI++VC EKE KL +L K +K I+F KR
Sbjct: 287 MNEYIQVVVGNEELKTNSKIKQIVEVCSGREKEDKLIGVLDNF---KGDKVIVFCNMKRT 343
Query: 368 VDDITRKMKRDG 379
DD+ + R G
Sbjct: 344 CDDLEYVLNRSG 355
>UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5;
Eukaryota|Rep: Ethylene-responsive RNA helicase -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 474
Score = 336 bits (825), Expect = 7e-91
Identities = 156/247 (63%), Positives = 189/247 (76%), Gaps = 2/247 (0%)
Query: 59 KWDLSRLKPFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDY 118
K +L L PF+K+FYV + E +VE +R EIT++GR++PKP +F + GFPDY
Sbjct: 47 KVNLDDLPPFEKNFYVESPSIAAMTEGEVEEYRRRREITIEGRDVPKPIKSFHDVGFPDY 106
Query: 119 VMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSR 178
V+ EI+K GF +PTPIQAQGWP+AL G D++GIA TGSGKT++Y+LPAIVH+N QP
Sbjct: 107 VLQEIEKAGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTIAYLLPAIVHVNAQPILDH 166
Query: 179 GDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIAT 238
GDGPI LVLAPTRELA QIQ+ KF +S+I NTC++GG PKGPQ RDL GVEIVIAT
Sbjct: 167 GDGPIVLVLAPTRELAVQIQQEATKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIAT 226
Query: 239 PGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPR 298
PGRL+D LES TNL+R T +VLDEADRMLDMGFEPQIRK I PDRQTL WSATWP+
Sbjct: 227 PGRLIDMLESNHTNLRRVT-IVLDEADRMLDMGFEPQIRKCISD-TPDRQTLYWSATWPK 284
Query: 299 EVQSLAS 305
V ++S
Sbjct: 285 NVNHVSS 291
>UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 535
Score = 328 bits (805), Expect = 2e-88
Identities = 153/322 (47%), Positives = 219/322 (68%), Gaps = 2/322 (0%)
Query: 55 LRKPKWDLSRLKPFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAG 114
L+ +D++ L PF+K+FYV R +V + ENEI + G K LTF+E
Sbjct: 100 LQPVNYDITTLPPFEKNFYVESPITANRDAEEVSRYLQENEIQVNGCESIKALLTFEECN 159
Query: 115 FPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQP 174
FP ++D I + + KPTPIQA GWPI L G D+VGIA TGSGKT+S+++PAI+HI + P
Sbjct: 160 FPQSILDVIKEQNYIKPTPIQAIGWPIVLQGKDVVGIAETGSGKTISFLIPAIIHILDTP 219
Query: 175 KSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEI 234
+ +GP L+LAPTREL QI + KF + I FGG P+ Q +D +G +I
Sbjct: 220 LAQYREGPRVLILAPTRELVCQIADEAIKFTKGTAIKTVRCFGGVPQSSQMKDFQSGCDI 279
Query: 235 VIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 294
+ATPGRL+DF++ G T+L RCT+L+LDEADRML+MGFE Q++ II QIRPDRQT+MW+A
Sbjct: 280 CVATPGRLIDFIKRGVTSLSRCTFLILDEADRMLEMGFEVQVQDIIGQIRPDRQTVMWTA 339
Query: 295 TWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEK 354
TWP+ +Q A F+ LQIN+G+ L AN ++ QII+VC E ++++K++ ++K I +EK
Sbjct: 340 TWPQAIQQFALGFMFHPLQINIGNPDLHANESVKQIIEVCQERDRDSKMNEIVKRIGSEK 399
Query: 355 ENKTIIFIETKRRVDDITRKMK 376
K +IF++TKR D++ K++
Sbjct: 400 --KVLIFVKTKRSADNLCYKLR 419
>UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein;
n=2; Tetrahymena thermophila|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 713
Score = 320 bits (785), Expect = 5e-86
Identities = 159/332 (47%), Positives = 227/332 (68%), Gaps = 9/332 (2%)
Query: 52 GASLRKPKWDLSRLKPFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRN--IPKPTLT 109
G +L W L F+K FY + R E ++E + +N I+ K + +P P L+
Sbjct: 45 GQNLAAIDWTKENLTTFQKVFYKESQKI--RTEEEIEEFYRQNHISAKSPHGKVPDPFLS 102
Query: 110 FDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVH 169
+ + FP Y+M+E+ F KP+PIQ+ +P+ LSGHD++GIA TGSGKTLS++LP+IVH
Sbjct: 103 WTDTHFPQYIMNEVTHAKFEKPSPIQSLAFPVVLSGHDLIGIAETGSGKTLSFLLPSIVH 162
Query: 170 INNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLD 229
IN QP +GDGPI LVLAPTRELA QI+ ++F +SK+ C++GGA K Q L
Sbjct: 163 INAQPTVKKGDGPIVLVLAPTRELAMQIERESERFGKSSKLKCACIYGGADKYSQRALLQ 222
Query: 230 AGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQT 289
GV++VIATPGRL+DFLES T L+R TYLVLDEADRMLDMGFE QIRKI+ QIRPDRQT
Sbjct: 223 QGVDVVIATPGRLIDFLESETTTLRRVTYLVLDEADRMLDMGFEIQIRKILGQIRPDRQT 282
Query: 290 LMWSATWPREVQSLASEFLKDY-LQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLK 348
LM+SATWP+ VQ+LA ++ K+ + + +G +LA N I QI+ V ++ K++ L+K
Sbjct: 283 LMFSATWPKNVQNLAQDYCKNTPVYVQIGKHELAINERIKQIVYVT---DQSKKINQLIK 339
Query: 349 EI-MAEKENKTIIFIETKRRVDDITRKMKRDG 379
++ +++K +IF +TK+ + ++R + ++G
Sbjct: 340 QLDCLTQKDKVLIFAQTKKGCESMSRILNKEG 371
>UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68;
n=2; Cryptosporidium|Rep: Similar to RNA-dependent
helicase p68 - Cryptosporidium hominis
Length = 406
Score = 319 bits (783), Expect = 9e-86
Identities = 150/252 (59%), Positives = 188/252 (74%), Gaps = 2/252 (0%)
Query: 130 KPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLAP 189
+PT IQ QGWP+ALSGHDM+GIA TGSGKTL ++LPA++HI QP GDGPI LVLAP
Sbjct: 10 EPTAIQVQGWPVALSGHDMIGIAETGSGKTLGFLLPAMIHIRAQPLLRYGDGPICLVLAP 69
Query: 190 TRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESG 249
TREL +QI+E ++F + K+ NT ++GG PK PQ + GVEI IA PGRL+D LE G
Sbjct: 70 TRELVEQIREQANQFGSIFKLRNTAIYGGVPKRPQQASIRNGVEICIACPGRLIDLLEEG 129
Query: 250 RTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLK 309
TNL R TYLVLDEADRMLDMGFEPQIRK++ QIRPDRQTL+WSATWP+EVQ LA + K
Sbjct: 130 YTNLSRVTYLVLDEADRMLDMGFEPQIRKLVSQIRPDRQTLLWSATWPKEVQKLARDLCK 189
Query: 310 DY-LQINVGSLQ-LAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRR 367
+ + INVGS+ L A+HNI Q ++V E EK+ +L L ++M E K +IF ETKR
Sbjct: 190 EIPIHINVGSVDALKASHNIKQYVNVVEESEKKARLKMFLGQVMVESAPKVLIFCETKRG 249
Query: 368 VDDITRKMKRDG 379
D +T++++ DG
Sbjct: 250 ADILTKELRLDG 261
>UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=6; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 502
Score = 319 bits (783), Expect = 9e-86
Identities = 155/327 (47%), Positives = 216/327 (66%), Gaps = 7/327 (2%)
Query: 52 GASLRKPKWDLSRLKPFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFD 111
G++L + WD + + +FY P + R E ++ W EN IT+ G +P+P L F
Sbjct: 92 GSNLHRIDWDAVQKVATQWNFYKPQ---KPRSEEEIATWLRENSITIYGDRVPQPMLEFS 148
Query: 112 EAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHIN 171
+ PD + GF KPTPIQ+ WP+ L+ D+VG+A TGSGKT+++++PA +HI
Sbjct: 149 DLVAPDAIHQAFMDAGFQKPTPIQSVSWPVLLNSRDIVGVAKTGSGKTMAFMIPAALHIM 208
Query: 172 NQPKSSRGDGPIALVLAPTRELAQQIQ-EVCDKFANTSKIHNTCLFGGAPKGPQARDLDA 230
QP GDGPIALVLAPTRELA QI+ E I TC++GG PKGPQ R L A
Sbjct: 209 AQPPLQPGDGPIALVLAPTRELAVQIETETRKALTRVPSIMTTCVYGGTPKGPQQRALRA 268
Query: 231 GVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTL 290
GV + IATPGRL+D LE+ TNL R TYL LDEADRMLDMGFE QIRKI QIR DRQTL
Sbjct: 269 GVHVCIATPGRLIDLLETNCTNLLRVTYLTLDEADRMLDMGFEDQIRKICSQIRTDRQTL 328
Query: 291 MWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEI 350
M+SATWPRE+++LA+ F KD++++++GS +L AN ++ Q + V Y KE K+ +L+++
Sbjct: 329 MFSATWPREIRNLAASFQKDFVRVHIGSEELVANADVHQHVFVVEGYHKEEKMEEILRQV 388
Query: 351 MAEKENKTIIFIETKRRVDDITRKMKR 377
+ + ++F++TK+ D + ++ R
Sbjct: 389 GPQ---RVLVFVKTKKSCDILQDRLGR 412
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 316 bits (775), Expect = 8e-85
Identities = 154/295 (52%), Positives = 204/295 (69%), Gaps = 4/295 (1%)
Query: 84 ESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIAL 143
+ EA+R +EIT+ G N+P P +F+ GFP ++ EI + GF+ PTPIQAQ WPIAL
Sbjct: 126 DPSTEAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIAL 185
Query: 144 SGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDK 203
D+V IA TGSGKTL Y+LP +HI + R GP LVLAPTRELA QI E K
Sbjct: 186 QCQDVVAIAKTGSGKTLGYLLPGFMHIKRLQNNPRS-GPTVLVLAPTRELATQILEEAVK 244
Query: 204 FANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDE 263
F +S+I +TCL+GGAPKGPQ RDLD GV++V+ATPGRL D LE R +LK+ +YLVLDE
Sbjct: 245 FGRSSRISSTCLYGGAPKGPQLRDLDRGVDVVVATPGRLNDILEMRRISLKQVSYLVLDE 304
Query: 264 ADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSL-QLA 322
ADRMLDMGFEPQIRKI+++I P RQTLM++ATWP+EV+ +A + L +Q+ +GS+ +L
Sbjct: 305 ADRMLDMGFEPQIRKIVKEIPPRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELV 364
Query: 323 ANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKR 377
AN I Q +++ EK +L +L+ + +K +IF TKR D + R + R
Sbjct: 365 ANSAITQNVELITPSEKLRRLEQILRS--QDSGSKVLIFCTTKRMCDQLARTLTR 417
>UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n=6;
Trypanosomatidae|Rep: Putative DEAD-box RNA helicase
HEL64 - Trypanosoma brucei brucei
Length = 568
Score = 313 bits (769), Expect = 4e-84
Identities = 151/298 (50%), Positives = 207/298 (69%), Gaps = 6/298 (2%)
Query: 84 ESDVEAWRSENEITLKGRNIPKPTLTFDE-AGF-PDYVMDEIDKMGFAKPTPIQAQGWPI 141
E + WR E+ IT+ G + P P +FD G P Y++ ++ F PTP+QAQ WP+
Sbjct: 76 EEEATKWREEHVITIFGDDCPPPMSSFDHLCGIVPPYLLKKLTAQNFTAPTPVQAQSWPV 135
Query: 142 ALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVC 201
LSG D+VG+A TGSGKTL +++PA+ HI Q GDGP+ +VLAPTRELAQQI+E
Sbjct: 136 LLSGRDLVGVAKTGSGKTLGFMVPALAHIAVQEPLRSGDGPMVVVLAPTRELAQQIEEET 195
Query: 202 DKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVL 261
K ++ C++GGAPKGPQ L GV I++ATPGRL+DFL+ R NL R TYLVL
Sbjct: 196 KKVI-PGDVYCGCVYGGAPKGPQLGLLRRGVHILVATPGRLIDFLDIKRINLHRVTYLVL 254
Query: 262 DEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQL 321
DEADRMLDMGFEPQ+RKI QIRPDRQT+M+SATWPRE+Q LA+EF K +++I+VGS +L
Sbjct: 255 DEADRMLDMGFEPQVRKICGQIRPDRQTVMFSATWPREIQRLAAEFQKQWIRISVGSTEL 314
Query: 322 AANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
AN ++ Q + E+ K+ +L L++E +E + ++F + KR D++ R+++R G
Sbjct: 315 QANKDVTQRFILTQEFAKQDELRKLMQE---HREERVLVFCKMKRTADELERQLRRWG 369
>UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 598
Score = 309 bits (759), Expect = 7e-83
Identities = 150/286 (52%), Positives = 194/286 (67%), Gaps = 3/286 (1%)
Query: 94 NEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIAS 153
N I L ++P P LTF+E PD + I + KPTPIQ+ P+AL GHD++GIA
Sbjct: 111 NAIKLLASDVPSPALTFEELNLPDTITKTITDNKWEKPTPIQSVSIPVALKGHDLIGIAK 170
Query: 154 TGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNT 213
TGSGKT ++++PA+VHI Q RGDGPI LVL+PTRELAQQI EV F + I T
Sbjct: 171 TGSGKTAAFLIPAMVHIGLQEPMYRGDGPIVLVLSPTRELAQQIAEVAKGFCDNLMIRQT 230
Query: 214 CLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFE 273
CLFGGA +GPQA DL +V+ATPGRL+DF+E G+ + R +LVLDEAD+MLDMGFE
Sbjct: 231 CLFGGAGRGPQANDLRHLPSLVVATPGRLIDFIEGGQCPMNRVNFLVLDEADQMLDMGFE 290
Query: 274 PQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDV 333
PQIRKII I DRQT+M+SATWP+E+Q LA++FL D + + +G+ L N NI Q+I
Sbjct: 291 PQIRKIIGHISKDRQTMMFSATWPKEIQQLAADFLVDPVHMIIGNKDLTTNSNIKQVITK 350
Query: 334 CMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
C E+EK +K +L E K++K IIF +TKR DD+ + G
Sbjct: 351 CEEFEKLSKCLEVLNE---HKDDKIIIFTKTKRTTDDLQENLNMKG 393
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 40; n=2; core eudicotyledons|Rep: Probable
DEAD-box ATP-dependent RNA helicase 40 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1088
Score = 309 bits (758), Expect = 9e-83
Identities = 150/294 (51%), Positives = 206/294 (70%), Gaps = 4/294 (1%)
Query: 85 SDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALS 144
S VE +R ++E+T G NIP P +TF+ +G P ++ E+ GF PTPIQAQ WPIAL
Sbjct: 412 SPVEIYRKQHEVTTTGENIPAPYITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQ 471
Query: 145 GHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKF 204
D+V IA TGSGKTL Y++PA + + + SR +GP L+LAPTRELA QIQ+ +F
Sbjct: 472 SRDIVAIAKTGSGKTLGYLIPAFILLRHCRNDSR-NGPTVLILAPTRELATQIQDEALRF 530
Query: 205 ANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEA 264
+S+I TCL+GGAPKGPQ ++L+ G +IV+ATPGRL D LE + ++ + LVLDEA
Sbjct: 531 GRSSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEA 590
Query: 265 DRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSL-QLAA 323
DRMLDMGFEPQIRKI+ +I P RQTLM++ATWP+EV+ +AS+ L + +Q+N+G + +LAA
Sbjct: 591 DRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAA 650
Query: 324 NHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKR 377
N I Q ++V + EKE +L +L+ E+ +K IIF TKR D + R + R
Sbjct: 651 NKAITQYVEVVPQMEKERRLEQILRS--QERGSKVIIFCSTKRLCDHLARSVGR 702
>UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;
Tetrahymena thermophila SB210|Rep: P68-like protein,
putative - Tetrahymena thermophila SB210
Length = 699
Score = 302 bits (742), Expect = 8e-81
Identities = 161/349 (46%), Positives = 228/349 (65%), Gaps = 26/349 (7%)
Query: 52 GASLRKPKWDLSRLKPFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRN--IPKPTLT 109
G +L + LKPF+K FY + + ++ ++ E I ++ ++ +P+P +
Sbjct: 138 GENLHDIDYTKVELKPFQKVFYQVGKSIHT--DEEIATYQREKGIIIRSKHKEVPQPFIK 195
Query: 110 FDEAGFPDYVMDEIDKMGFAKPTPIQAQ-------------------GWPIALSGHDMVG 150
++E FP Y+M I+ F++P PIQAQ +PI LSGHD++G
Sbjct: 196 WNETKFPKYIMSVIEDSKFSEPMPIQAQYVTNKKQKKKYKMYECSFIPFPIVLSGHDLIG 255
Query: 151 IASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKI 210
IA TGSGKTLS++LPA+VHIN Q G+GPIALVLAPTRELA QIQE C KF + KI
Sbjct: 256 IAQTGSGKTLSFMLPALVHINAQDPVKPGEGPIALVLAPTRELANQIQEQCFKFGSKCKI 315
Query: 211 HNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDM 270
+ C++GGAPK Q ++L G +IVIATPGRL+DFLES +LKR TYLVLDEADRMLDM
Sbjct: 316 SSVCVYGGAPKIYQEKELRNGCDIVIATPGRLIDFLESNVIDLKRVTYLVLDEADRMLDM 375
Query: 271 GFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLK-DYLQINVGSLQLAANHNILQ 329
GFEP IRKI+ QIRPDRQTLM+SATWP+ V+ LA +F D + I +G ++ N++I Q
Sbjct: 376 GFEPSIRKIVGQIRPDRQTLMFSATWPQTVRRLALDFCHGDPIHIQIGDMENNVNNDIDQ 435
Query: 330 IIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRD 378
+++ + +K ++ +L + + +KTIIF +TK+ DD+++ ++ D
Sbjct: 436 QVEIIDKSQKYDRVKEILSTM--TRSDKTIIFTQTKKDCDDLSKALQTD 482
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 298 bits (732), Expect = 1e-79
Identities = 145/295 (49%), Positives = 202/295 (68%), Gaps = 4/295 (1%)
Query: 84 ESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIAL 143
E EA+ ++EIT+ G +P P ++F+ G P+ ++ E+ GF+ P+PIQAQ WPIA+
Sbjct: 137 ELSPEAYCRKHEITVSGGQVPPPLMSFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAM 196
Query: 144 SGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDK 203
D+V IA TGSGKTL Y++P +H+ SR GP LVL+PTRELA QIQ K
Sbjct: 197 QNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSRM-GPTILVLSPTRELATQIQVEALK 255
Query: 204 FANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDE 263
F +SKI CL+GGAPKGPQ ++++ GV+IV+ATPGRL D LE R +L + +YLVLDE
Sbjct: 256 FGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDE 315
Query: 264 ADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSL-QLA 322
ADRMLDMGFEPQIRKI+ ++ RQTLM++ATWP+EV+ +A++ L + Q+N+G++ +L
Sbjct: 316 ADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELV 375
Query: 323 ANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKR 377
AN +I Q I+V EK ++L +L+ E +K IIF TKR D + R + R
Sbjct: 376 ANKSITQTIEVLAPMEKHSRLEQILRS--QEPGSKIIIFCSTKRMCDQLARNLTR 428
>UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n=3;
Piroplasmida|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 707
Score = 293 bits (720), Expect = 4e-78
Identities = 149/319 (46%), Positives = 201/319 (63%), Gaps = 5/319 (1%)
Query: 60 WDLSRLKPFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRN-IPKPTLTFDEAGFPDY 118
WD L KKDFY + + RP ++E + I ++G + +PKP TFDEA F
Sbjct: 270 WDKEELVEIKKDFYDLSYEADSRPGEEIERILKAHNIIIEGEHPLPKPVTTFDEAVFNQQ 329
Query: 119 VMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSR 178
+ + I + F +PTPIQ GW L+G D++G++ TGSGKTL+++LP ++H+ QP
Sbjct: 330 IQNIIKESNFTEPTPIQKVGWTSCLTGRDIIGVSQTGSGKTLTFLLPGLLHLLAQPPVGT 389
Query: 179 GDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIAT 238
G GPI L+L+PTREL QI E ++ + ++GGA K Q R+L G EI++AT
Sbjct: 390 G-GPIMLILSPTRELCLQIAEEARPYSRLLNLRLVPIYGGASKFAQVRELQNGAEIMVAT 448
Query: 239 PGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPR 298
PGRLL+FL +G L R +Y V+DEADRMLDMGFEPQIRKI+ QIRPDRQTLM+SATWP
Sbjct: 449 PGRLLEFLSNGTIKLNRVSYFVMDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFSATWPS 508
Query: 299 EVQSLASEFLK-DYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENK 357
E++ LASEF K + + I VG L+L AN NI Q ++ YE KL L I EK K
Sbjct: 509 EIKRLASEFCKANSIYIQVGDLELTANPNIRQNVEFPNSYEVRDKLFDFLGSIPPEK--K 566
Query: 358 TIIFIETKRRVDDITRKMK 376
+IF + K D +T ++
Sbjct: 567 VLIFSDLKSFADQLTSALR 585
>UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2;
Magnoliophyta|Rep: Isoform 2 of Q5VQL1 - Oryza sativa
subsp. japonica (Rice)
Length = 759
Score = 289 bits (709), Expect = 8e-77
Identities = 139/264 (52%), Positives = 186/264 (70%), Gaps = 4/264 (1%)
Query: 115 FPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQP 174
F + ++ + GF+ PTPIQAQ WPIAL D+V +A TGSGKTL Y++P + +
Sbjct: 238 FKSTIYVKVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQ 297
Query: 175 KSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEI 234
+SR DGP LVL+PTRELA QIQ+ KF +S+I + CL+GGAPKGPQ RDL+ G +I
Sbjct: 298 HNSR-DGPTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADI 356
Query: 235 VIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 294
V+ATPGRL D LE R +L + +YLVLDEADRMLDMGFEPQIRKI++Q++P RQTLM++A
Sbjct: 357 VVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTA 416
Query: 295 TWPREVQSLASEFLKDYLQINVGSL-QLAANHNILQIIDVCMEYEKETKLSTLLKEIMAE 353
TWP+EV+ +AS+ L + +Q+N+G+ QL AN +I Q +DV EK +L +L+ E
Sbjct: 417 TWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRS--QE 474
Query: 354 KENKTIIFIETKRRVDDITRKMKR 377
+K IIF TKR D + R + R
Sbjct: 475 PGSKIIIFCSTKRMCDQLARNLAR 498
Score = 39.9 bits (89), Expect = 0.11
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 88 EAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEI 123
EA+R+++EIT+ G P P +TF GFP ++ E+
Sbjct: 160 EAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREV 195
>UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53; n=2; Equus
caballus|Rep: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53 - Equus caballus
Length = 711
Score = 280 bits (686), Expect = 5e-74
Identities = 150/338 (44%), Positives = 208/338 (61%), Gaps = 16/338 (4%)
Query: 52 GASLRKPKWDLSRLKPFKKDFYVPHLDVEKRPESDVEAWRSEN-EITLKG------RNIP 104
GA+ K KW + L P KK+FYV + V+AWR EN IT + R IP
Sbjct: 243 GAAWAKRKW--ADLPPIKKNFYVESTATSSLSQVQVDAWRQENFNITCEDLKDGEKRPIP 300
Query: 105 KPTLTFDEAGFPDY--VMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSY 162
PT F++A F Y V+ I K GF +PTPIQ+Q WPI L G D++G+A TG+GKTLSY
Sbjct: 301 NPTCKFEDA-FEHYPEVLKSIKKAGFQRPTPIQSQAWPIVLQGMDLIGVAQTGTGKTLSY 359
Query: 163 ILPAIVHINNQPKS-SRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPK 221
++P +H+++QP S +GP LVL PTRELA Q++ C K++ + + C++GG +
Sbjct: 360 LIPGFIHLDSQPISREERNGPGMLVLTPTRELALQVEAECSKYSYKG-LKSVCVYGGGNR 418
Query: 222 GPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIE 281
Q + + GV+I+IATPGRL D + NL+ TYLVLDEAD+MLD+GFE QI KI+
Sbjct: 419 KEQIQHITKGVDIIIATPGRLNDLQMNKCVNLRSITYLVLDEADKMLDLGFEGQITKILL 478
Query: 282 QIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKET 341
+RPDRQT+M SATWP ++ LA +LK+ + + VG+L L A H + Q I V E EK T
Sbjct: 479 DVRPDRQTVMTSATWPHTIRQLARSYLKEPMIVYVGTLDLVAVHTVKQDIIVTTEEEKRT 538
Query: 342 KLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
+ L+ + E+K IIF+ K DD++ + G
Sbjct: 539 LIQEFLRNL--APEDKAIIFVSRKLVADDLSSDLSIQG 574
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 276 bits (676), Expect = 8e-73
Identities = 140/293 (47%), Positives = 189/293 (64%), Gaps = 3/293 (1%)
Query: 84 ESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIAL 143
E + + + +N+I L G NIP +TF+E P +M+ I + + PTPIQ+ PI L
Sbjct: 61 EEEQKKYLEKNQIKLLGENIPPVAVTFEELNLPQEIMEVIKENNWTNPTPIQSLSIPIGL 120
Query: 144 SGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDK 203
G+DMVGIA TGSGKT S+++PA++HI+ Q K S DGPI LVL+PTRELA Q EV +
Sbjct: 121 KGNDMVGIAKTGSGKTASFLIPALMHISAQRKISENDGPIVLVLSPTRELALQTDEVAAQ 180
Query: 204 FANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDE 263
F + C++GG + Q L EIV ATPGRL+DFL+SG N R +LVLDE
Sbjct: 181 FCVKMGYKHVCIYGGEDRHRQINKLRFHPEIVTATPGRLIDFLQSGVFNPNRANFLVLDE 240
Query: 264 ADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAA 323
ADRMLDMGFEPQIR II + DR+T M+SATWP+E++ LAS+FL + + ++VG +LA
Sbjct: 241 ADRMLDMGFEPQIRAIIASLTKDRETFMFSATWPKEIRQLASDFLSNPIHMHVGGEELAT 300
Query: 324 NHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMK 376
N I Q + + E+EK K +LKE + K IIF +TKR V ++ +K
Sbjct: 301 NERIQQNVLLLQEHEKGEKCVEILKE---NQSKKIIIFAKTKRTVQQLSDFLK 350
>UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 970
Score = 275 bits (675), Expect = 1e-72
Identities = 141/318 (44%), Positives = 209/318 (65%), Gaps = 7/318 (2%)
Query: 66 KPFKKDFYVPHLDVEKRPESDVEAWRSE-NEITLKGRNIPKPTLTFDEAGFPDYVMDEID 124
+ FKK+FY+ ++ + +++V+A+R E + IT+KG + PKP T+ + G +M+ +
Sbjct: 261 RKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLK 320
Query: 125 KMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIA 184
K ++KPT IQAQ P +SG D++GIA TGSGKTL+++LP HI +QP+ GDGPIA
Sbjct: 321 KFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIA 380
Query: 185 LVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLD 244
++LAPTRELA Q + +KFA + C +GG Q DL G EIV+ TPGR++D
Sbjct: 381 VILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMID 440
Query: 245 FL--ESGR-TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQ 301
L SG+ TNL+R TYLVLDEADRM D GFEPQI K++ IRPD+QT+++SAT+PR ++
Sbjct: 441 VLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMKVVNNIRPDKQTVLFSATFPRHME 500
Query: 302 SLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIF 361
+LA + L ++I VG + + +I Q +C E++K KL LL M +E +I+F
Sbjct: 501 ALARKVLDKPVEILVGGKSVVCS-DITQNAVICAEHQKFLKLLELLG--MYYEEGSSIVF 557
Query: 362 IETKRRVDDITRKMKRDG 379
++ + + DDI ++ R G
Sbjct: 558 VDKQEKADDIVDQLMRTG 575
>UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;
n=2; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 42 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1166
Score = 274 bits (673), Expect = 2e-72
Identities = 134/313 (42%), Positives = 206/313 (65%), Gaps = 6/313 (1%)
Query: 66 KPFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDK 125
+PF+K+FY+ D+ + + +V +R E E+ + G+++P+P + + G ++D + K
Sbjct: 487 EPFRKNFYIEVKDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKK 546
Query: 126 MGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIAL 185
+ + KP PIQ Q PI +SG D +G+A TGSGKTL ++LP + HI +QP GDGPI L
Sbjct: 547 LNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGL 606
Query: 186 VLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDF 245
V+APTREL QQI KF+ I ++GG+ Q +L G EIV+ TPGR++D
Sbjct: 607 VMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDI 666
Query: 246 L--ESGR-TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQS 302
L SG+ TNL+R T+LV+DEADRM DMGFEPQI +II+ IRP+RQT+++SAT+PR+V++
Sbjct: 667 LCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVET 726
Query: 303 LASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFI 362
LA + L ++I VG + N +I Q+++V E ++ +L LL E +EK K ++F+
Sbjct: 727 LARKVLNKPVEIQVGG-RSVVNKDITQLVEVRPESDRFLRLLELLGE-WSEK-GKILVFV 783
Query: 363 ETKRRVDDITRKM 375
+++ + D + R M
Sbjct: 784 QSQEKCDALYRDM 796
>UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:
ENSANGP00000013118 - Anopheles gambiae str. PEST
Length = 512
Score = 273 bits (670), Expect = 4e-72
Identities = 145/321 (45%), Positives = 205/321 (63%), Gaps = 12/321 (3%)
Query: 57 KPKWDLSRLKPFKKDFYVPHLDVEKRPESDVEAWR-SENEITLKGRNIPKPTLTFDEA-- 113
K +W ++ P K FY +V V A+R + N I + + IP P F +A
Sbjct: 55 KERW--AKCPPLVKMFYNEREEVANMRPEQVAAFREANNNIDNERKPIPNPVSEFHQAFG 112
Query: 114 GFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQ 173
+PD +M+E+ K F PTPIQAQ WPI L G D++GIA TG+GKTL+++LPA++HI Q
Sbjct: 113 EYPD-LMEELRKQKFTTPTPIQAQAWPILLRGEDLIGIAQTGTGKTLAFLLPALIHIEGQ 171
Query: 174 P--KSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAG 231
P + RG GP LVLAPTRELA QI++ K+ I CL+GG + Q + G
Sbjct: 172 PIPRGERG-GPNVLVLAPTRELALQIEKEVAKYQFRG-IKAVCLYGGGDRRAQINVVRNG 229
Query: 232 VEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLM 291
VEI+IATPGRL D ++ G ++ TYL+LDEADRMLDMGFEPQIRK++ +RPDRQT+M
Sbjct: 230 VEILIATPGRLNDLVQEGVVDVSTITYLILDEADRMLDMGFEPQIRKVLLDVRPDRQTVM 289
Query: 292 WSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIM 351
SATWP V+ LA ++ D +Q+ +G+L LAA H + Q+I+V E +K +++ ++++
Sbjct: 290 TSATWPDGVRRLAQSYMHDPIQVYIGTLDLAATHTVTQVIEVMDEEDKFQRINEFVRDM- 348
Query: 352 AEKENKTIIFIETKRRVDDIT 372
+ +K IIF K R DD++
Sbjct: 349 -QPTDKVIIFCGKKTRADDLS 368
>UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;
n=15; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
45 - Arabidopsis thaliana (Mouse-ear cress)
Length = 989
Score = 273 bits (670), Expect = 4e-72
Identities = 132/305 (43%), Positives = 202/305 (66%), Gaps = 6/305 (1%)
Query: 66 KPFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDK 125
+PF+K+FY+ D+ + + V A+R E E+ + G+++P+P + + G ++D + K
Sbjct: 354 EPFRKNFYIEVKDISRMTQDAVNAYRKELELKVHGKDVPRPIQFWHQTGLTSKILDTLKK 413
Query: 126 MGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIAL 185
+ + KP PIQAQ PI +SG D +G+A TGSGKTL ++LP + HI +QP GDGPI L
Sbjct: 414 LNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGL 473
Query: 186 VLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDF 245
V+APTREL QQI KF+ I ++GG+ Q +L G EIV+ TPGR++D
Sbjct: 474 VMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDI 533
Query: 246 L--ESGR-TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQS 302
L SG+ TNL+R TYLV+DEADRM DMGFEPQI +I++ IRPDRQT+++SAT+PR+V++
Sbjct: 534 LCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVET 593
Query: 303 LASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFI 362
LA + L ++I VG + N +I Q++++ E E+ ++L LL E ++ K ++F+
Sbjct: 594 LARKVLNKPVEIQVGG-RSVVNKDITQLVEIRPESERFSRLLELLGEWY--EKGKVLVFV 650
Query: 363 ETKRR 367
++ +
Sbjct: 651 RSQEK 655
>UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila
melanogaster|Rep: LD33749p - Drosophila melanogaster
(Fruit fly)
Length = 703
Score = 273 bits (669), Expect = 6e-72
Identities = 151/333 (45%), Positives = 215/333 (64%), Gaps = 21/333 (6%)
Query: 63 SRLKPFKKDFYVPHLDVEKRPESDVEAWRSEN-EITL-------KGRN---IPKPTLTFD 111
S+ P K+FY +V +S++E R EN +IT+ +G IP P TF+
Sbjct: 226 SKCPPLTKNFYKEAPEVANLTKSEIERIREENNKITVSYVFEPKEGETSPPIPNPVWTFE 285
Query: 112 E--AGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVH 169
+ A +PD +++EI KMGF+KP+PIQ+Q WPI L GHDM+GIA TG+GKTL+++LP ++H
Sbjct: 286 QCFAEYPD-MLEEITKMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIH 344
Query: 170 INNQ--PKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARD 227
Q P+ +RG G LVLAPTRELA QI+ K++ + C++GG + Q D
Sbjct: 345 TEYQSTPRGTRG-GANVLVLAPTRELALQIEMEVKKYSFRG-MKAVCVYGGGNRNMQISD 402
Query: 228 LDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 287
L+ G EI+I TPGRL D + + ++ TYLVLDEADRMLDMGFEPQIRK++ IRPDR
Sbjct: 403 LERGAEIIICTPGRLNDLIMANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPDR 462
Query: 288 QTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCM-EYEKETKLSTL 346
QT+M SATWP V+ LA ++K+ +Q+ VGSL LAA H++ QII + + +K +++
Sbjct: 463 QTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLDLAATHSVKQIIKLMEDDMDKFNTITSF 522
Query: 347 LKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
+K + +K IIF K R DD++ ++ DG
Sbjct: 523 VKNM--SSTDKIIIFCGRKVRADDLSSELTLDG 553
>UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX43;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX43 - Homo sapiens (Human)
Length = 648
Score = 272 bits (666), Expect = 1e-71
Identities = 149/331 (45%), Positives = 203/331 (61%), Gaps = 16/331 (4%)
Query: 52 GASLRKPKWDLSRLKPFKKDFYVPHLDVEKRPESDVEAWRSEN-EIT---LKG---RNIP 104
G +K KW + L P KK+FY + + ++WR EN IT LK R IP
Sbjct: 180 GLKWQKTKW--ADLPPIKKNFYKESTATSAMSKVEADSWRKENFNITWDDLKDGEKRPIP 237
Query: 105 KPTLTFDEAG--FPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSY 162
PT TFD+A +P+ VM+ I K GF KPTPIQ+Q WPI L G D++G+A TG+GKTL Y
Sbjct: 238 NPTCTFDDAFQCYPE-VMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCY 296
Query: 163 ILPAIVHINNQPK-SSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPK 221
++P +H+ QP + + P LVL PTRELA Q++ C K++ + + C++GG +
Sbjct: 297 LMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKYSYKG-LRSVCVYGGGNR 355
Query: 222 GPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIE 281
Q +L GV+I+IATPGRL D S NLK TYLVLDEAD+MLDMGFEPQI KI+
Sbjct: 356 DEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMGFEPQIMKILL 415
Query: 282 QIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKET 341
+RPDRQT+M SATWP V LA +LK+ + + VG+L L A ++ Q I V E EK +
Sbjct: 416 DVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTTEEEKWS 475
Query: 342 KLSTLLKEIMAEKENKTIIFIETKRRVDDIT 372
+ T L+ + +K I+F+ K D ++
Sbjct: 476 HMQTFLQSM--SSTDKVIVFVSRKAVADHLS 504
>UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=15; Pezizomycotina|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Gibberella zeae (Fusarium graminearum)
Length = 1227
Score = 268 bits (656), Expect = 2e-70
Identities = 136/329 (41%), Positives = 204/329 (62%), Gaps = 8/329 (2%)
Query: 58 PKWDLSRLK--PFKKDFYVPHLDVEKRPESDVEAWRSENE-ITLKGRNIPKPTLTFDEAG 114
P D S+++ P +K+F+ ++ E++V R E + I + G+++PKP + + G
Sbjct: 544 PTIDYSKIEIEPIRKNFWHEPAELSLLTEAEVADLRLELDGIKVNGKDVPKPVQKWAQCG 603
Query: 115 FPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQP 174
+D +D +G+ KPTPIQ Q P +SG D++G+A TGSGKT++++LP HI +QP
Sbjct: 604 LTRQTLDVVDNLGYEKPTPIQMQALPALMSGRDVIGVAKTGSGKTVAFLLPMFRHIKDQP 663
Query: 175 KSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEI 234
DGPI L++ PTRELA QI + C F + C +GGAP Q +L G EI
Sbjct: 664 PLKDTDGPIGLIMTPTRELAVQIHKDCKPFLKMMGLRAVCAYGGAPIREQIAELKRGAEI 723
Query: 235 VIATPGRLLDFL--ESGR-TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLM 291
++ TPGR++D L GR TNLKR TY+VLDEADRM DMGFEPQ+ KI +RPDRQT++
Sbjct: 724 IVCTPGRMIDLLAANQGRVTNLKRVTYVVLDEADRMFDMGFEPQVMKIFANMRPDRQTIL 783
Query: 292 WSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIM 351
+SAT PR + SL + LK+ +++ VG + A I QI++V E K ++ LL E+
Sbjct: 784 FSATMPRIIDSLTKKVLKNPIEVTVGGRSVVAK-EIEQIVEVRDEPSKFHRVLELLGELY 842
Query: 352 AEKEN-KTIIFIETKRRVDDITRKMKRDG 379
E+ +T+IF+E + + DD+ +++ G
Sbjct: 843 DRDEDARTLIFVERQEKADDLLKELMMKG 871
>UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Ustilago maydis|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ustilago maydis (Smut fungus)
Length = 1156
Score = 266 bits (652), Expect = 7e-70
Identities = 137/320 (42%), Positives = 202/320 (63%), Gaps = 7/320 (2%)
Query: 66 KPFKKDFYVPHLDVEKRPESDVEAWRSENE-ITLKGRNIPKPTLTFDEAGFPDYVMDEID 124
+PF K FY P +++ E R E + IT++GR+ PKP + G P +D I
Sbjct: 433 EPFNKAFYHPPAEIQDMSEELANQIRLEMDAITVRGRDCPKPLTKWSHCGLPASCLDVIK 492
Query: 125 KMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIA 184
++G++ PTPIQ+Q P +SG D++G+A TGSGKT++++LP HI +Q +GP+
Sbjct: 493 RLGYSAPTPIQSQAMPAIMSGRDIIGVAKTGSGKTMAFLLPMFRHIKDQRPVEPSEGPVG 552
Query: 185 LVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLD 244
+++ PTRELA QI F + C++GGAP Q ++ +IV+ATPGRL+D
Sbjct: 553 IIMTPTRELAVQIYREMRPFIKALGLRAACVYGGAPISEQIAEMKKTADIVVATPGRLID 612
Query: 245 FL--ESGR-TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQ 301
L SGR TNL R TYLVLDEADRM DMGFEPQ+ KI+ IRPDRQT+++SAT+P++++
Sbjct: 613 LLTANSGRVTNLYRVTYLVLDEADRMFDMGFEPQVMKILNNIRPDRQTVLFSATFPKQME 672
Query: 302 SLASEFLKDY-LQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIM-AEKENKTI 359
SLA + LK+ L+I VG + A I QI++V E K +L +L E+ EK+ +T+
Sbjct: 673 SLARKVLKNKPLEITVGGRSVVA-AEIEQIVEVRSEDTKFHRLLEILGELYNREKDARTL 731
Query: 360 IFIETKRRVDDITRKMKRDG 379
IF++ + DD+ + + R G
Sbjct: 732 IFVDRQEAADDLLKDLIRKG 751
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 265 bits (649), Expect = 2e-69
Identities = 135/311 (43%), Positives = 195/311 (62%), Gaps = 4/311 (1%)
Query: 66 KPFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDK 125
+P KDFY + E + +R I + G ++ +P TF++ GF +M I K
Sbjct: 186 EPINKDFYEELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIKK 245
Query: 126 MGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIAL 185
+ KPT IQ Q PI LSG D++GIA TGSGKT +++LP IVHI +QP+ R +GPI +
Sbjct: 246 QAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGV 305
Query: 186 VLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDF 245
+ APTRELA QI KF+ + + ++GG K Q ++L AG EIV+ATPGRL+D
Sbjct: 306 ICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDM 365
Query: 246 LESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLAS 305
L+ + R +YLVLDEADRM D+GFEPQ+R I+ QIRPDRQTL++SAT P +V+ LA
Sbjct: 366 LKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAR 425
Query: 306 EFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAE-KENKTIIFIET 364
E L D +++ VG + + AN +I Q+++V + + E KL LL+++ E ++F
Sbjct: 426 EILSDPIRVTVGEVGM-ANEDITQVVNV-IPSDAE-KLPWLLEKLPGMIDEGDVLVFASK 482
Query: 365 KRRVDDITRKM 375
K VD+I ++
Sbjct: 483 KATVDEIEAQL 493
>UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase prp11; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase prp11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1014
Score = 264 bits (647), Expect = 3e-69
Identities = 134/317 (42%), Positives = 201/317 (63%), Gaps = 6/317 (1%)
Query: 68 FKKDFYVPHLDVEKRPESDVEAWRSENE-ITLKGRNIPKPTLTFDEAGFPDYVMDEIDKM 126
FKKDFYV +++ ++V+ R+ + I ++G + PKP ++ + G + I+ +
Sbjct: 377 FKKDFYVEPEELKNLSPAEVDELRASLDGIKIRGIDCPKPVTSWSQCGLSAQTISVINSL 436
Query: 127 GFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALV 186
G+ KPT IQAQ P SG D++G+A TGSGKT++++LP HI +Q G+GPIA++
Sbjct: 437 GYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAII 496
Query: 187 LAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFL 246
+ PTRELA QI C F I C +GGAP Q DL G EIV+ TPGR++D L
Sbjct: 497 MTPTRELAVQIFRECKPFLKLLNIRACCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVL 556
Query: 247 --ESGR-TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSL 303
+GR TNL RCTYLVLDEADRM D+GFEPQ+ +II IRPDRQT+++SAT+PR +++L
Sbjct: 557 SANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRIINNIRPDRQTVLFSATFPRAMEAL 616
Query: 304 ASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEK-ENKTIIFI 362
A + LK ++I VG + A+ + QI++V E K ++L LL E+ + + +T++F+
Sbjct: 617 ARKVLKKPVEITVGGRSVVAS-EVEQIVEVRPEESKFSRLLELLGELYNNQLDVRTLVFV 675
Query: 363 ETKRRVDDITRKMKRDG 379
+ + D + + + G
Sbjct: 676 DRQESADALLSDLMKRG 692
>UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-PA
- Drosophila melanogaster (Fruit fly)
Length = 1224
Score = 264 bits (646), Expect = 3e-69
Identities = 134/315 (42%), Positives = 201/315 (63%), Gaps = 7/315 (2%)
Query: 67 PFKKDFYVPHLDVEKRPESDVEAWRSENE-ITLKGRNIPKPTLTFDEAGFPDYVMDEIDK 125
PF+K+FYV ++ + +DVE +RS+ E I +KG+ PKP T+ + G M+ + +
Sbjct: 468 PFRKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRR 527
Query: 126 MGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIAL 185
+GF KPTPIQ Q P +SG D++GIA TGSGKTL++ILP HI +QP GDG IA+
Sbjct: 528 LGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDGAIAI 587
Query: 186 VLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDF 245
++APTREL QI + KF+ + + C++GG Q +L G EI++ TPGR++D
Sbjct: 588 IMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDM 647
Query: 246 L--ESGR-TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQS 302
L SGR TNL+R TY+VLDEADRM DMGFEPQ+ +II+ +RPDRQT+M+SAT+PR++++
Sbjct: 648 LAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEA 707
Query: 303 LASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFI 362
LA LK +++ VG + + Q + + + K KL LL + ++ I+F+
Sbjct: 708 LARRILKKPIEVIVGGRSVVCK-EVEQHVVILNDDAKFFKLLELLG--IYQEAGSIIVFV 764
Query: 363 ETKRRVDDITRKMKR 377
+ + D + R + +
Sbjct: 765 DKQENADILLRDLMK 779
>UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 518
Score = 264 bits (646), Expect = 3e-69
Identities = 132/324 (40%), Positives = 201/324 (62%), Gaps = 6/324 (1%)
Query: 58 PKWDLSRL--KPFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGF 115
P+ D S + KPF K+FY H ++ K+ + +++ R + I + G +P ++F GF
Sbjct: 54 PRVDHSEIDYKPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGF 113
Query: 116 PDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPK 175
+ +M I K+ + +PT IQ Q PIALSG D++GIA TGSGKT +++ PA+VHI +QP+
Sbjct: 114 DEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALVHIMDQPE 173
Query: 176 SSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIV 235
GDGPI L+ APTREL QQI +F IH +FGG K Q++ L G EIV
Sbjct: 174 LQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKALQEGAEIV 233
Query: 236 IATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAT 295
+ATPGRL+D +++ TNL R TYLV DEADRM DMGFEPQ+R I +RPDRQTL++SAT
Sbjct: 234 VATPGRLIDHVKAKATNLHRVTYLVFDEADRMFDMGFEPQVRSIANNVRPDRQTLLFSAT 293
Query: 296 WPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMA-EK 354
+ ++V+ L + L D +++ +G L AN ++ QI+ + +K L + +++
Sbjct: 294 FKKKVEHLCRDILVDPVRVVIGELG-EANEDVTQIVHIF--NSMPSKWEWLTQNLVSFAS 350
Query: 355 ENKTIIFIETKRRVDDITRKMKRD 378
+IF+ K +++ ++++
Sbjct: 351 AGSVLIFVTKKLNSEELATNLRKN 374
>UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 573
Score = 262 bits (641), Expect = 1e-68
Identities = 141/337 (41%), Positives = 204/337 (60%), Gaps = 12/337 (3%)
Query: 50 NPGASLRKPKWD--LSRLKPFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRN---IP 104
N G R+ WD L + P +K +D+ + + + E EI++K N +P
Sbjct: 81 NFGNKKREINWDDELKNMAPIRKRL----IDLPTEDQQETMDFIKEFEISIKKENNFYLP 136
Query: 105 KPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYIL 164
KP T + F + + + K F KPTP+Q+ GWPIALSG DM+GI+ TGSGKTLS+IL
Sbjct: 137 KPIDTIESVPFQSTIKNFLSKK-FEKPTPVQSLGWPIALSGSDMLGISKTGSGKTLSFIL 195
Query: 165 PAIVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQ 224
PAI HI QP+ S GP LV+APTRELA QI + +++ I ++GGAP+ Q
Sbjct: 196 PAIEHILAQPRQSYYPGPSVLVVAPTRELANQINQEAEQYLRLVNIEIATIYGGAPRRSQ 255
Query: 225 ARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIR 284
L +IV+ TPGR++DF+ESG +LK ++LV+DEADR+++MGFE QI I IR
Sbjct: 256 QLQLSRRPKIVVGTPGRIIDFMESGDLSLKNISFLVVDEADRLMEMGFEQQIDGIFNSIR 315
Query: 285 PDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVC-MEYEKETKL 343
PDRQ L WSATWP++V S A + ++ +++ +GS QL AN NI Q + + +K L
Sbjct: 316 PDRQVLYWSATWPKKVSSFAEKHIRTPIRLQIGSSQLTANKNISQKFKIVPTDADKVDAL 375
Query: 344 STLLKEI-MAEKENKTIIFIETKRRVDDITRKMKRDG 379
L EI A+++ +T+IF TK+ D + ++ +G
Sbjct: 376 MDTLGEIYSADEKAQTLIFTMTKKGADTLKHYIQSNG 412
>UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1151
Score = 262 bits (641), Expect = 1e-68
Identities = 132/320 (41%), Positives = 201/320 (62%), Gaps = 6/320 (1%)
Query: 65 LKPFKKDFYVPHLDVEKRPESDVEAWRSENE-ITLKGRNIPKPTLTFDEAGFPDYVMDEI 123
L PF+K+FY ++ + E+++ R E + I + G+++PKP + + G +D I
Sbjct: 510 LPPFRKNFYTEPTELAEMTEAEIADLRLELDGIKVAGKDVPKPVQKWSQCGLDVKSLDVI 569
Query: 124 DKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPI 183
K+G+ +PT IQ Q P +SG D++G+A TGSGKT++++LP HI +Q DGPI
Sbjct: 570 TKLGYERPTSIQMQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIRDQRPLKGSDGPI 629
Query: 184 ALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLL 243
L++ PTRELA QI + C F + C +GGA Q DL G EI++ TPGR++
Sbjct: 630 GLIMTPTRELATQIHKECKPFLKAMGLRAVCAYGGAIIKDQIADLKRGAEIIVCTPGRMI 689
Query: 244 DFL--ESGR-TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREV 300
+ L SGR TNL+R TY+VLDEADRM DMGFEPQ+ K+ IRP+RQT+++SAT PR +
Sbjct: 690 ELLAANSGRVTNLQRVTYVVLDEADRMFDMGFEPQVMKVFNNIRPNRQTILFSATMPRIM 749
Query: 301 QSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIM-AEKENKTI 359
+LA + L+ ++I VG + A I QI++V E EK +L LL E+ +++ +T+
Sbjct: 750 DALAKKTLQSPVEIVVGGRSVVA-PEITQIVEVREEKEKFHRLLELLGELYNTDEDARTL 808
Query: 360 IFIETKRRVDDITRKMKRDG 379
IF++ + + DD+ + + R G
Sbjct: 809 IFVDRQEKADDLLKDLMRKG 828
>UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 604
Score = 261 bits (640), Expect = 2e-68
Identities = 139/312 (44%), Positives = 202/312 (64%), Gaps = 22/312 (7%)
Query: 87 VEAWRSENEITLKGRNI--PKPTLTFDEAG-FPDYVMDEIDKMGFAKPTPIQAQGWPIAL 143
++ +R+++ I ++ +++ P P + F++ FP +MD + K GF PT IQAQGW IAL
Sbjct: 110 IKEYRAQHNIFIRSQHVTVPDPIMRFEDVQCFPQMLMDLLLKAGFKGPTAIQAQGWSIAL 169
Query: 144 SGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDK 203
+GHD++GIA TGSGKTL+++LPAIVHI Q +R P L+LAPTREL QI + K
Sbjct: 170 TGHDLIGIAQTGSGKTLAFLLPAIVHILAQ---ARSHDPKCLILAPTRELTLQIYDQFQK 226
Query: 204 FANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDE 263
F+ S+++ CL+GG + Q L G +I+IA PGRL+D L+ G T LK+ ++LVLDE
Sbjct: 227 FSVGSQLYAACLYGGQDRYIQKSQLRKGPQILIACPGRLIDLLDQGCTTLKQVSFLVLDE 286
Query: 264 ADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLK-DYLQINVGSLQLA 322
ADRMLDMGFEPQIRKI++QIRP RQT+++SATWP+EVQ LA +F K + + I +G+++L
Sbjct: 287 ADRMLDMGFEPQIRKIVDQIRPQRQTMLFSATWPKEVQKLALDFCKQEPVHIQIGNVELT 346
Query: 323 ANHNILQIIDVCMEYEK---------------ETKLSTLLKEIMAEKENKTIIFIETKRR 367
+N I QI+ V +K + +S LL + K +IF TK+
Sbjct: 347 SNRMIKQIVYVMKAIDKNQRYNQTIDGANIYTRSSISLLLYLLKDIAHKKILIFCSTKKG 406
Query: 368 VDDITRKMKRDG 379
D + + + R+G
Sbjct: 407 CDQLQKTLDREG 418
>UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=7;
Bilateria|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 741
Score = 261 bits (639), Expect = 2e-68
Identities = 134/281 (47%), Positives = 183/281 (65%), Gaps = 8/281 (2%)
Query: 103 IPKPTLTFDEAGFPDY--VMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTL 160
IP P TF++A F +Y +++EI K GFAKP+PIQAQ WP+ L G D++GIA TG+GKTL
Sbjct: 317 IPNPVQTFEQA-FHEYPELLEEIKKQGFAKPSPIQAQAWPVLLKGEDLIGIAQTGTGKTL 375
Query: 161 SYILPAIVHINNQP--KSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGG 218
+++LPA +HI QP + GP LV+APTRELA QI++ K+ I CL+GG
Sbjct: 376 AFLLPAFIHIEGQPVPRGEARGGPNVLVMAPTRELALQIEKEVFKY-QFRDIKAICLYGG 434
Query: 219 APKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRK 278
+ Q + GVEI+IATPGRL D + + ++ TYLVLDEADRMLDMGFEPQIRK
Sbjct: 435 GDRRTQINKVKGGVEIIIATPGRLNDLVAANVIDITSITYLVLDEADRMLDMGFEPQIRK 494
Query: 279 IIEQIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYE 338
++ IRPDRQT+M SATWP V+ LA ++ + +Q+ VG+L LAA H + Q I+V E +
Sbjct: 495 LLLDIRPDRQTIMTSATWPPGVRRLAQSYMSNPVQVYVGTLDLAATHTVTQQIEVIDEED 554
Query: 339 KETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
K ++ + + +K IIF K R DD++ + G
Sbjct: 555 KYMRVMNFVTNM--GPSDKVIIFCGRKTRADDLSSEFVLSG 593
>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
thermophila SB210|Rep: CLN3 protein - Tetrahymena
thermophila SB210
Length = 1138
Score = 258 bits (633), Expect = 1e-67
Identities = 126/266 (47%), Positives = 177/266 (66%), Gaps = 1/266 (0%)
Query: 64 RLKPFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEI 123
+ + F K+FY H D+ K E VE R E EI + G PKP ++F GF + +M +I
Sbjct: 18 KYEAFTKNFYQEHPDITKLTEQQVEKIRKEFEIKVSGVRPPKPIVSFGHLGFDEELMRQI 77
Query: 124 DKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPI 183
K+GF KPT IQ Q P LSG D+VG+A TGSGKT+SY+ P ++HI +Q + + +GPI
Sbjct: 78 TKLGFEKPTQIQCQALPCGLSGRDIVGVAKTGSGKTVSYLWPLLIHILDQRELEKNEGPI 137
Query: 184 ALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLL 243
L+LAPTREL QQ+ ++A I L GG K Q + L AGVEI+IATPGRL+
Sbjct: 138 GLILAPTRELCQQVYTESKRYAKIYNISVGALLGGENKHEQWKMLKAGVEILIATPGRLM 197
Query: 244 DFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSL 303
+ ++ TNL+RCTY+V+DEAD+M MGFE QIR I++QIRPDRQTL+++AT +++Q+L
Sbjct: 198 EMIQKKATNLRRCTYVVIDEADKMFSMGFEKQIRSIMQQIRPDRQTLLFTATLKKKIQNL 257
Query: 304 ASEFLKDYLQINVGSLQLAANHNILQ 329
+ L++ + I +G + AN +I Q
Sbjct: 258 VMDVLRNPVTIKIGG-ENQANEDIRQ 282
>UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_14,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 532
Score = 258 bits (631), Expect = 2e-67
Identities = 130/296 (43%), Positives = 191/296 (64%), Gaps = 8/296 (2%)
Query: 87 VEAWRSENEITLKGRNI--PKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALS 144
V + E+ I ++ +I P+P + + + FP+ + I + +PTPIQA +PI +S
Sbjct: 48 VSEYLDEHSIVVEQNDIQVPQPFIEWKDCQFPNQLNKRISLKAYNRPTPIQASVFPIIMS 107
Query: 145 GHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKF 204
GHD++GIA TGSGKT++Y+LP +VHI +Q K GP+ L+L PTRELA QIQE F
Sbjct: 108 GHDLIGIAQTGSGKTIAYLLPGLVHIESQRKKG---GPMMLILVPTRELAMQIQEHISYF 164
Query: 205 ANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEA 264
+ +++ C++GGA K PQ L +IV+ATPGRL+DFL++ TNL TYLVLDEA
Sbjct: 165 SEAYNMNSACIYGGADKRPQEMALARDPDIVVATPGRLIDFLDAQVTNLHNVTYLVLDEA 224
Query: 265 DRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFL-KDYLQINVGSLQLAA 323
DRMLDMGFE Q+RKI IR DRQT+ +SATWP+ VQ+LA + + + + +GS ++
Sbjct: 225 DRMLDMGFEQQVRKIDSYIREDRQTVFFSATWPKTVQNLACDLCHNEPINLYIGSQEVTI 284
Query: 324 NHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
N NI Q + EK+ +L +L+E+ ++K +IF+ETK+ +D+ + G
Sbjct: 285 NKNITQETICLYQNEKQEELLYILEEL--SNKDKVLIFVETKKDCEDLASYLSEHG 338
>UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium
tetraurelia|Rep: RNA helicase, putative - Paramecium
tetraurelia
Length = 1157
Score = 257 bits (630), Expect = 3e-67
Identities = 140/320 (43%), Positives = 199/320 (62%), Gaps = 10/320 (3%)
Query: 66 KPFKKDFY--VPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDE- 122
+PF+KDFY V L V+ PE + + +I ++G+++PKP + + G D V++
Sbjct: 460 QPFRKDFYREVSEL-VQMTPEEAKKLRQQLGDIKVRGKDVPKPIQNWYQCGLNDRVLNVL 518
Query: 123 IDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGP 182
I+K F P PIQAQ P +SG D +GIA TGSGKTL+Y+LP + H+ +QP GDGP
Sbjct: 519 IEKKKFINPFPIQAQAVPCIMSGRDFIGIAETGSGKTLAYLLPLLRHVLDQPALKDGDGP 578
Query: 183 IALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRL 242
IA+++APTRELA QI C F + ++ C GGA Q DL G EIV+ TPGR+
Sbjct: 579 IAIIMAPTRELAHQIYVNCRWFTSILNLNVVCCVGGAGIAGQLSDLKRGTEIVVCTPGRM 638
Query: 243 LDFLESGR---TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPRE 299
+D L + TNL+R TY+V+DEADRM D+GFEPQI KII+ IRPDRQ +M+SAT+P+
Sbjct: 639 IDVLTTSNGKITNLRRVTYVVIDEADRMFDLGFEPQICKIIQNIRPDRQLVMFSATFPKN 698
Query: 300 VQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTI 359
V+ LA L+ ++ VG + A NI QII+ E +K KL L +E + +
Sbjct: 699 VEQLAKRVLRKPIECIVGG-RGQAGGNIEQIIEFMDESDKLYKLLLLFQEWYT--KGSIL 755
Query: 360 IFIETKRRVDDITRKMKRDG 379
IF+E + DD+ +++ + G
Sbjct: 756 IFVEKQTEADDLFKELLKYG 775
>UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=4; Saccharomycetales|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 913
Score = 256 bits (626), Expect = 9e-67
Identities = 133/322 (41%), Positives = 204/322 (63%), Gaps = 14/322 (4%)
Query: 67 PFKKDFYVPHLDVEKRPESDVEAWRSENE-ITLKGRNIPKPTLTFDEAGFPDYVMDEID- 124
PF+KDFY ++ K PE +V R + + I ++G N +P + + + G P +M I+
Sbjct: 274 PFRKDFYTEPTEILKLPEEEVANLRLKLDGIRVRGVNCTRPIIRWSQLGLPSTIMSIIEG 333
Query: 125 KMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIA 184
++ ++ P+ IQAQ P +SG D++G+A TGSGKTLS++LP + HI +QP RGDGPI
Sbjct: 334 RLNYSSPSSIQAQAIPAIMSGRDIIGVAKTGSGKTLSFVLPLLRHIQDQPPLRRGDGPIG 393
Query: 185 LVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLD 244
L++ PTRELA QI + + F I + C FGG+ Q +L G +I++ TPGR++D
Sbjct: 394 LIMTPTRELALQIHKELNHFTKKLNISSCCCFGGSSIESQIAELKKGAQIIVGTPGRIID 453
Query: 245 FL--ESGR-TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQ 301
L SGR TNL+R TYLVLDEADRM DMGFEPQ+ K+ ++RPDRQT+++SAT+PR+++
Sbjct: 454 LLAANSGRVTNLQRVTYLVLDEADRMFDMGFEPQVTKVFTRVRPDRQTVLFSATFPRKME 513
Query: 302 SLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYE----KETKLSTLLKEIM----AE 353
LA + L + ++I VG + + A+ I Q +++ + +E K S LL + +
Sbjct: 514 LLAKKILDNPMEIVVGGISVVAS-EITQKVELFENEDDKSLEEAKFSKLLSTLNDYGDKD 572
Query: 354 KENKTIIFIETKRRVDDITRKM 375
E K +IF+E + D++ K+
Sbjct: 573 AECKILIFVEKQIAADELLVKL 594
>UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1;
Ostreococcus tauri|Rep: DEAD-box protein abstrakt -
Ostreococcus tauri
Length = 1030
Score = 255 bits (625), Expect = 1e-66
Identities = 131/329 (39%), Positives = 200/329 (60%), Gaps = 7/329 (2%)
Query: 55 LRKPKWDLSRLKPFKKDFYVPHLDVEKRPESDVEAWRSENE-ITLKGRNIPKPTLTFDEA 113
L K D +P KKDFY+ ++ ++ A R+E + I +G+ +PKP T+ A
Sbjct: 276 LGKVNHDEIDYEPVKKDFYIESKEISSMTKAQTRALRAELDGIKCRGKKVPKPIKTWAHA 335
Query: 114 GFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQ 173
G + + I + GF KP PIQAQ P+ +SG D +GIA TGSGKTL+YILP + HIN Q
Sbjct: 336 GLSGRIHELIRRCGFEKPMPIQAQALPVIMSGRDCIGIAKTGSGKTLAYILPMLRHINAQ 395
Query: 174 PKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVE 233
GDGPI +++ PTREL QI + ++ + ++GG+ Q +L G E
Sbjct: 396 EPLKNGDGPIGMIMGPTRELVTQIGKEAKRYGKALGFNAVSVYGGSGIAAQIGELKRGAE 455
Query: 234 IVIATPGRLLDFLESGR---TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTL 290
IV TPGR++D L +G TNL+R TY+VLDEADRM DMGFEPQI +I+ +RPDRQT+
Sbjct: 456 IVACTPGRMIDILTTGGGKITNLRRVTYIVLDEADRMFDMGFEPQITRILANLRPDRQTV 515
Query: 291 MWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEI 350
M+SAT+P +++LA L++ ++I +G + N +I Q++++ E ++ ++ LL E
Sbjct: 516 MFSATFPHTMEALARAALENPVEIQIGG-KSVVNSDIDQVVEIRPEEDRFLRVLELLGEW 574
Query: 351 MAEKENKTIIFIETKRRVDDITRKMKRDG 379
+ K IIF+ ++ + D +++ + G
Sbjct: 575 C--ERGKIIIFVASQDKADSTFKELLKSG 601
>UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 723
Score = 255 bits (624), Expect = 2e-66
Identities = 129/311 (41%), Positives = 196/311 (63%), Gaps = 7/311 (2%)
Query: 66 KPFKKDFYVPHLDVEKRPESDVEAWRSENE-ITLKGRNIPKPTLTFDEAGFPDYVMDEID 124
+P KK+FY+ ++ +++V+ R E + I +G+ +PKP T+ +AG + V + I
Sbjct: 74 EPVKKNFYIEAKEIASMTKAEVKQLRVELDGIKCRGKKVPKPIKTWAQAGLNNRVHELIR 133
Query: 125 KMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIA 184
+ GF KP PIQAQ P+ +SG D +G+A TGSGKTL+YILP + HIN Q + GDGPI
Sbjct: 134 RSGFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAYILPMLRHINAQEPLASGDGPIG 193
Query: 185 LVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLD 244
+++ PTREL QI + C ++ ++GG+ Q DL G EIV TPGR++D
Sbjct: 194 MIMGPTRELVTQIGKDCKRYGKAMGFSAVSVYGGSGIAAQIGDLKRGAEIVACTPGRMID 253
Query: 245 FLESGR---TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQ 301
L +G TNL+R TY+VLDEADRM DMGFEPQI +I+ +RPDRQT+M+SAT+P ++
Sbjct: 254 LLTTGSGKITNLRRVTYMVLDEADRMFDMGFEPQITRILANLRPDRQTVMFSATFPHTME 313
Query: 302 SLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIF 361
+LA L + ++I +G + N +I Q++++ E ++ ++ LL E + K IIF
Sbjct: 314 ALARAALDNPIEIQIGG-KSVVNSDIEQLVELRPEEDRFLRVLELLGEWY--ERGKIIIF 370
Query: 362 IETKRRVDDIT 372
+ ++ + D T
Sbjct: 371 VASQDKADSTT 381
>UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;
Coelomata|Rep: ATP-dependent RNA helicase DDX42 - Homo
sapiens (Human)
Length = 938
Score = 255 bits (624), Expect = 2e-66
Identities = 121/314 (38%), Positives = 193/314 (61%), Gaps = 4/314 (1%)
Query: 67 PFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKM 126
PF+K+FY H ++ + R + + + G P+P +F GF + +M +I K
Sbjct: 212 PFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKS 271
Query: 127 GFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALV 186
+ +PTPIQ QG P+ALSG DM+GIA TGSGKT ++I P ++HI +Q + GDGPIA++
Sbjct: 272 EYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVI 331
Query: 187 LAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFL 246
+ PTREL QQI C +F + + ++GG QA+ L G EIV+ TPGRL+D +
Sbjct: 332 VCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHV 391
Query: 247 ESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASE 306
+ TNL+R +YLV DEADRM DMGFE Q+R I +RPDRQTL++SAT+ ++++ LA +
Sbjct: 392 KKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARD 451
Query: 307 FLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMA-EKENKTIIFIETK 365
L D +++ G + AN ++ QI+++ + +K + L + ++ ++F+ K
Sbjct: 452 ILIDPIRVVQGDIG-EANEDVTQIVEIL--HSGPSKWNWLTRRLVEFTSSGSVLLFVTKK 508
Query: 366 RRVDDITRKMKRDG 379
+++ +K++G
Sbjct: 509 ANAEELANNLKQEG 522
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 254 bits (621), Expect = 4e-66
Identities = 136/316 (43%), Positives = 200/316 (63%), Gaps = 13/316 (4%)
Query: 68 FKKDFYVPHLDVEKRPESDVEAWRSE-NEITLKGRNIPKPTLTFDEAGFPDYVMDEIDK- 125
F+K FY ++ +++ R E + + +G+N+P P LT+ + P+ VM I
Sbjct: 346 FRKHFYQVPFEMSTMDNRELDMLRLELDNVRARGKNVPPPFLTWGQLLMPESVMSVIQND 405
Query: 126 MGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIAL 185
+GFAKP+PIQ Q PI LSG DM+G+A TGSGKTLSY+LP + HI +Q G+GPI L
Sbjct: 406 LGFAKPSPIQCQAIPIVLSGRDMIGVAKTGSGKTLSYVLPMVRHIQDQLFPKPGEGPIGL 465
Query: 186 VLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDF 245
VL+PTRELA QI++ KF++T + C +GG+ Q +L GV +++ATPGRL+D
Sbjct: 466 VLSPTRELALQIEKEILKFSSTMDLKVCCCYGGSNIENQISELKRGVNVIVATPGRLIDL 525
Query: 246 L--ESGR-TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQS 302
L GR T L+R T++VLDEADRM DMGFEPQI+KI QIRPD+QT+++SAT+PR+++
Sbjct: 526 LAANGGRITTLRRTTFVVLDEADRMFDMGFEPQIQKIFTQIRPDKQTVLFSATFPRKLEQ 585
Query: 303 LASEFLKDYLQINVGSLQLAANHNILQII-----DVCMEYEKETKLSTLLKEI--MAEKE 355
LA + L + ++I VG + + A+ +II D M + K KL +L + +
Sbjct: 586 LAKKVLHNPIEIIVGGVSVVASEISQEIILFEDTDQLMNH-KIQKLEDILSRFFDLGKNT 644
Query: 356 NKTIIFIETKRRVDDI 371
K ++F+E + D +
Sbjct: 645 GKVLVFVEKQTDADKL 660
>UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 440
Score = 250 bits (613), Expect = 3e-65
Identities = 136/300 (45%), Positives = 197/300 (65%), Gaps = 9/300 (3%)
Query: 85 SDVEAWRSENEIT-LKGRNIP-KPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIA 142
S+V+A R +T + G + P +F +AGF ++ + F P+PIQAQ WPI
Sbjct: 4 SEVQAARDALAVTQVDGLSTDLAPVSSFADAGFSKELLRVTAQ--FKTPSPIQAQSWPII 61
Query: 143 LSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCD 202
+SGHDMVGIA+TGSGKTL++ +PA+ I++QP G PI LVLAPTRELAQQ +V D
Sbjct: 62 MSGHDMVGIAATGSGKTLAFGMPALTQIHSQPPCKPGQ-PICLVLAPTRELAQQTAKVFD 120
Query: 203 KFANTSKIHNTCLFGGAPKGPQARDLDAG--VEIVIATPGRLLDFLESGRTNLKRCTYLV 260
S + C++GGAPK Q + AG +++ATPGRL DF+E G L R T LV
Sbjct: 121 DAGEASGVRCVCVYGGAPKYEQKAQMKAGGGAAVIVATPGRLRDFMEEGVIKLDRVTMLV 180
Query: 261 LDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQ 320
LDEADRMLD+GFEP+IR I R DRQT+M+SATWP+ VQSLASEF+ + +++ +G+
Sbjct: 181 LDEADRMLDLGFEPEIRAIAGATRADRQTVMFSATWPQSVQSLASEFMCNPIKVRIGAEG 240
Query: 321 LAANHNILQIIDVCMEYEKETKLSTLLKEIMAE-KE-NKTIIFIETKRRVDDITRKMKRD 378
L A+ +I QI++V +K+ L+ ++K+ + + KE +T+IF K+ ++ +++ R+
Sbjct: 241 LKASQSITQIVEVVEPQDKDRHLARVMKQYLGKGKEVPRTLIFGLYKKECANLHQRLSRE 300
>UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1072
Score = 248 bits (607), Expect = 2e-64
Identities = 131/322 (40%), Positives = 198/322 (61%), Gaps = 9/322 (2%)
Query: 66 KPFKKDFYVPHLDVEKRPESDVEAWRSENE-ITLKGRNIPKPTLTFDEAGFPDYVMDEID 124
+PF+K FYVP ++V + E + E R E + I ++G++ PKP + G P +D I
Sbjct: 360 EPFRKAFYVPPVEVLEMDEEEAELVRLEMDGIKIRGQDAPKPVRNWGAFGLPQGCLDVIK 419
Query: 125 KMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIA 184
G+ PT IQAQ P +SG D++GIA TGSGKT++++LP + H+ +Q S +GPIA
Sbjct: 420 HQGWETPTSIQAQAIPAIMSGRDVIGIAKTGSGKTVAFLLPMLRHVRDQRPVSGSEGPIA 479
Query: 185 LVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLD 244
+V++PTRELA QI + C F I +C GG+ + G E+VI TPGR++D
Sbjct: 480 VVMSPTRELASQIYKECQPFLKVLNIRASCCVGGSSISEDIAAMKKGAEVVICTPGRMID 539
Query: 245 FL--ESGR-TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQ 301
L +GR TN++R TY+V+DEADRM DMGFEPQ+ KII +RP Q +++SAT+P+ ++
Sbjct: 540 LLTANNGRVTNVRRTTYIVMDEADRMFDMGFEPQVMKIINNVRPSAQKVLFSATFPKTME 599
Query: 302 SLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKEN----K 357
SLA L L+I VG + A I Q ++V K T+L +L E+ E ++ +
Sbjct: 600 SLARRILVKPLEITVGGRSVVA-PEIDQRVEVRDGDTKFTRLLEILGEMGEEHKDEDDFR 658
Query: 358 TIIFIETKRRVDDITRKMKRDG 379
T+IF++ + DD+ R++ + G
Sbjct: 659 TLIFVDRQESADDLFRELLQRG 680
>UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 586
Score = 248 bits (606), Expect = 2e-64
Identities = 134/286 (46%), Positives = 184/286 (64%), Gaps = 9/286 (3%)
Query: 90 WRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMV 149
WR ++ + ++G++ P P F + FP M + GF PT IQ Q WPI L G+D+V
Sbjct: 94 WRKKHNVLIEGKSQPNPFQKFTDYEFPR--MFQHIFQGFTAPTVIQGQSWPIILGGNDLV 151
Query: 150 GIASTGSGKTLSYILPAIVHINNQPKS-SRGDGPIALVLAPTRELAQQIQEVCDKFANTS 208
G+A+TGSGKTL+++LPA++ I + PK S G P+ LV+APTRELAQQI+EVC +
Sbjct: 152 GLAATGSGKTLAFLLPALLKIISLPKRPSYGATPLVLVMAPTRELAQQIEEVCKTSIRGT 211
Query: 209 KIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRML 268
I C +GG K Q+R L GV+IVI TPGRL D L + +L YLVLDEADRML
Sbjct: 212 SIRQLCAYGGLGKIDQSRILRNGVDIVIGTPGRLNDLLR--KHHLSSVQYLVLDEADRML 269
Query: 269 DMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNIL 328
DMGF PQI +I+QI +RQTLM+SATWP+EV+ LAS+FLKD ++I VGS +L + N+
Sbjct: 270 DMGFMPQIESLIDQIPKERQTLMFSATWPKEVKLLASKFLKDPIKITVGSQELTGSINVT 329
Query: 329 Q---IIDVCMEYEKETKLSTLLKEIM-AEKENKTIIFIETKRRVDD 370
Q ID + + + + + +I+ A+ N I+F K + DD
Sbjct: 330 QHIVNIDDLSDLQSDDLIYDEINKILTADPTNTVIVFCNEKYKCDD 375
>UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 722
Score = 244 bits (597), Expect = 3e-63
Identities = 135/315 (42%), Positives = 192/315 (60%), Gaps = 7/315 (2%)
Query: 66 KPFKKDFYVPHLDVEKRPESDV-EAWRSENE-ITLKGRNIPKPTLTFDEAGFPDYVMDEI 123
+P K YV D++K + +V E R E E +KG+N PKP T+ E G MD I
Sbjct: 96 EPIHKALYVEVPDIKKLKKEEVKEIRRIELEGCIVKGKNCPKPIRTWSECGINPITMDVI 155
Query: 124 DKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPI 183
+ + KP+P+Q Q P+ +SG+D + A TGSGKTL+Y +P I H+ Q S+G+GPI
Sbjct: 156 KALKYEKPSPVQRQAIPVIMSGYDAIVCAKTGSGKTLAYTIPLIKHVMAQRPLSKGEGPI 215
Query: 184 ALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLL 243
+V AP RELA+QI +KF I + +FGG Q L G EIV+ TPGR++
Sbjct: 216 GIVFAPIRELAEQINTEINKFGKYLNIRSVAVFGGTGISNQIGALKRGTEIVVCTPGRMI 275
Query: 244 DFL--ESGR-TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREV 300
D L +GR TNL+R T++VLDEADRM DMGF PQI++IIE IRPD+Q +M+SAT+P V
Sbjct: 276 DILVTNNGRITNLRRVTFVVLDEADRMFDMGFGPQIKRIIEGIRPDKQIVMFSATFPISV 335
Query: 301 QSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTII 360
+ A EFLK ++I G +N I QI++V +K +L +++ E K + II
Sbjct: 336 EQHAREFLKKPIEIICGGRSQVSN-TIEQIVEVIETKKKIERLISIVLE-QNNKGGRIII 393
Query: 361 FIETKRRVDDITRKM 375
F ET++ D++ + +
Sbjct: 394 FTETQKNCDELYQNL 408
>UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 811
Score = 243 bits (594), Expect = 7e-63
Identities = 126/311 (40%), Positives = 191/311 (61%), Gaps = 5/311 (1%)
Query: 68 FKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMG 127
F K+FY H D+++ DV ++ + + G P+P +F F +M+ I K
Sbjct: 225 FNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRKSE 284
Query: 128 FAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVL 187
+ +PTPIQA P ALSG D++GIA TGSGKT +Y+ PAIVHI +QP G+GP+A+++
Sbjct: 285 YEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIV 344
Query: 188 APTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDL-DAGVEIVIATPGRLLDFL 246
PTRELA Q+ + KF I+ C +GG K Q+ +L + G E+V+ TPGR++D +
Sbjct: 345 VPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNELQNEGAEMVVCTPGRIIDLV 404
Query: 247 ESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASE 306
+ G TN R T+LV DEADRM DMGFE Q++ I + +RPDRQ LM+SAT+ ++V+ LA +
Sbjct: 405 KMGATNFLRTTFLVFDEADRMFDMGFEAQVKSISDHVRPDRQCLMFSATFKQKVERLARD 464
Query: 307 FLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMA-EKENKTIIFIETK 365
L D ++I G + AN +I Q + V ++ KL L++ ++ K +IF+ K
Sbjct: 465 ALVDPVRIVQGEVG-EANADIEQKVFVMQ--NQDVKLHWLIRNLVEFASLGKVLIFVTKK 521
Query: 366 RRVDDITRKMK 376
+D+ +K+K
Sbjct: 522 LDSEDVAKKLK 532
>UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4;
Eukaryota|Rep: RNA helicase, putative - Theileria
annulata
Length = 976
Score = 241 bits (590), Expect = 2e-62
Identities = 136/320 (42%), Positives = 190/320 (59%), Gaps = 9/320 (2%)
Query: 52 GASLRKPKWDLSRLK--PFKKDFYVPHLDVEKRPESDVEAWRSEN-EITLKGRNIPKPTL 108
G P+ D ++++ PF+K+FYV + E +V+A+R N I + G+ P+P
Sbjct: 309 GGKKELPRVDHTKIEYLPFRKNFYVQVSSITNMGEHEVDAFRRANGNIRVYGKKCPRPIS 368
Query: 109 TFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIV 168
+F + G PD ++ ++K + +P PIQ Q P + G D++GIA TGSGKTL+++LPAI
Sbjct: 369 SFSQCGLPDPILKILEKREYERPFPIQMQCIPALMCGRDVIGIAETGSGKTLAFLLPAIR 428
Query: 169 HINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDL 228
H +QP DG I LV+APTREL QI KF+ + ++GGA G Q L
Sbjct: 429 HALDQPSLRENDGMIVLVIAPTRELVIQISNESSKFSRAVGLKTLAIYGGAGIGEQLNAL 488
Query: 229 DAGVEIVIATPGRLLDFLESGR---TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP 285
G EIVI TPGRL+D L + TNL+R T+LVLDEADRM DMGF PQI I+ IRP
Sbjct: 489 KRGAEIVIGTPGRLIDVLTLSKGKVTNLRRVTFLVLDEADRMFDMGFAPQISAIVGNIRP 548
Query: 286 DRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLST 345
DRQT ++SAT+P +++LA + L LQI VG +A+ + Q + V E +K KL
Sbjct: 549 DRQTALFSATFPIMIENLAKKILAKPLQIVVGQRGKSAS-QVDQHVLVLNEEKKLLKLLK 607
Query: 346 LLKEIMAEKENKTIIFIETK 365
LL E + IIF+ T+
Sbjct: 608 LLGE--WHEHGNIIIFVNTQ 625
>UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 994
Score = 241 bits (589), Expect = 3e-62
Identities = 134/331 (40%), Positives = 195/331 (58%), Gaps = 9/331 (2%)
Query: 55 LRKPKWDLSRL--KPFKKDFYVPHLDVEKRPESDVEAWRSEN-EITLKGRNIPKPTLTFD 111
+ PK D S + +PFKK+FYV + E +VEA+R N I ++G+ P+P F
Sbjct: 332 IEMPKVDHSTIDYQPFKKNFYVQISAITAMKEHEVEAFRKANGNIRVRGKYCPRPIYNFS 391
Query: 112 EAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHIN 171
+ G PD ++ + + + KP PIQ Q P + G D++ IA TGSGKT++Y+LPAI H+
Sbjct: 392 QCGLPDPILSLLQRRNYEKPFPIQMQCIPALMCGRDVLAIAETGSGKTMAYLLPAIRHVL 451
Query: 172 NQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAG 231
QPK +G I L++APTRELA QI K I ++GG+P G Q L G
Sbjct: 452 YQPKLRENEGMIVLIIAPTRELASQIGVESSKLCKLVGIRTKAVYGGSPIGEQLNALKRG 511
Query: 232 VEIVIATPGRLLDFL--ESGR-TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 288
VEIV TPGRL++ L +G+ TNL+R T++V+DEADRM D+GF PQI I++ IRPDRQ
Sbjct: 512 VEIVCGTPGRLIEVLTISNGKVTNLRRVTFVVIDEADRMFDLGFSPQISAIVDNIRPDRQ 571
Query: 289 TLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLK 348
T ++SAT+P +++LA + L LQI VG +A+ + Q + V E +K L LL
Sbjct: 572 TALFSATFPPTIEALAKKILTKPLQIIVGESGKSAS-QVDQHVMVLPERQKMYALLKLLG 630
Query: 349 EIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
E + I+F+ + D + ++ + G
Sbjct: 631 E--WHEHGSIIVFVNRQLDADSMYAELIKHG 659
>UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Putative RNA helicase; n=3; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Putative RNA helicase - Dictyostelium
discoideum (Slime mold)
Length = 1151
Score = 240 bits (587), Expect = 5e-62
Identities = 128/311 (41%), Positives = 195/311 (62%), Gaps = 6/311 (1%)
Query: 68 FKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMG 127
F+K+FY+ + E++V +RSE + + G++ PKP ++ +AG + V + K
Sbjct: 469 FQKNFYIEVPVLANMTETEVLDFRSELGVKITGKDCPKPIQSWAQAGLTEKVHLLLKKFQ 528
Query: 128 FAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVL 187
+ KPT IQAQ P ++G D++GIA TGSGKTL+++LP HI QPKS+ G+G IAL++
Sbjct: 529 YEKPTSIQAQTIPAIMNGRDLIGIARTGSGKTLAFLLPMFRHILAQPKSAPGEGMIALIM 588
Query: 188 APTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLE 247
+PTRELA QI C KF+ + C++GGA Q +L G +IV+ TPGR++D L
Sbjct: 589 SPTRELALQIHVECKKFSKVLGLRTACVYGGASISEQIAELKRGADIVVCTPGRMIDILC 648
Query: 248 SGR---TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLA 304
+ TNL+R T+LVLDEADRM DMGF PQI I++ IRPDRQT+M+SAT+P +V+++A
Sbjct: 649 ANNRRITNLRRVTFLVLDEADRMFDMGFGPQINCIVDSIRPDRQTIMFSATFPPKVENVA 708
Query: 305 SEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIET 364
+ L L+I G + ++ +I Q ++V + +L LL I K + +IF
Sbjct: 709 KKILNKPLEIIAGGRSIVSS-DIEQFVEVRPTETRFRRLIELL-SIWYHK-GQILIFTNR 765
Query: 365 KRRVDDITRKM 375
+ D++ R++
Sbjct: 766 QETTDNLYRQL 776
>UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Takifugu
rubripes|Rep: Probable ATP-dependent RNA helicase DDX43
(EC 3.6.1.-) (DEAD box protein 43) (DEAD box protein
HAGE) (Helical antigen). - Takifugu rubripes
Length = 510
Score = 239 bits (586), Expect = 6e-62
Identities = 145/353 (41%), Positives = 195/353 (55%), Gaps = 45/353 (12%)
Query: 59 KWDLSRLKPFKKDFYVPHLDVEKRPESDVEAWRSENE--------ITLKG--RNIPKPTL 108
KW L P KK FY+ + +V WR E + +G R IPKP
Sbjct: 17 KW--KGLPPIKKQFYIEAESLSALMPEEVNQWRQAKENNNIFVDDLKKEGEKRPIPKPCR 74
Query: 109 TFDEAGFPDY--VMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPA 166
TF EA F Y +MD + GF PTPIQ+Q WP+ LSG D++ IA TG+GKTL+Y+LP
Sbjct: 75 TFLEA-FQHYTEIMDNVKHAGFVNPTPIQSQAWPVLLSGDDLIAIAQTGTGKTLAYLLPG 133
Query: 167 IVHINNQP-KSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQA 225
+H+N QP +GP LVL PTRELA Q+ C K+ + + C++GG + Q
Sbjct: 134 FIHMNGQPVPKCERNGPGMLVLTPTRELALQVDAECKKY-SYKDYKSVCVYGGGDRKAQI 192
Query: 226 RDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYL-------------------------- 259
++ GV+IVIATPGRL D + NL+ TYL
Sbjct: 193 HKVERGVDIVIATPGRLHDLQMNKLINLRSITYLVSCLHVFVFKMWDSRLRSVRLFLCNK 252
Query: 260 VLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSL 319
VLDEADRMLD+GFEPQI KI+ +RPDRQT+M SATWP V+ +A+ +LKD + + VGSL
Sbjct: 253 VLDEADRMLDLGFEPQIMKILLDVRPDRQTVMTSATWPASVRRMATSYLKDPMMVYVGSL 312
Query: 320 QLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDIT 372
L A ++ Q I + EK+ L LK + E ++K +IF+ K DD++
Sbjct: 313 DLTAVSSVQQKILIVSAEEKKPYLLNFLKNM--EPQDKVLIFVGRKLTADDLS 363
>UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_100,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 737
Score = 239 bits (586), Expect = 6e-62
Identities = 121/311 (38%), Positives = 194/311 (62%), Gaps = 3/311 (0%)
Query: 68 FKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMG 127
F+ +FY H ++ + VE + E +I +KG N+PKP ++F ++++I
Sbjct: 148 FESNFYQEHEEIANLNVAQVEKIKREYQIHVKGNNVPKPIISFGHLQLDQKLVNKIVAQN 207
Query: 128 FAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVL 187
F KPT IQ+Q P LSG +++G+A TGSGKT++Y+ P +VH++ Q + +GPI LV+
Sbjct: 208 FEKPTAIQSQALPCVLSGRNVIGVAKTGSGKTIAYVWPMLVHVSAQRAVEKKEGPIGLVV 267
Query: 188 APTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLE 247
PTREL QQ+ K+A +I + L GG K Q ++L AGV+I+IATPGRL++ ++
Sbjct: 268 VPTRELGQQVYLETKKYAQLFQISVSALLGGENKHHQWKELRAGVDIIIATPGRLIEMVK 327
Query: 248 SGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEF 307
TNL+RCTY+VLDEAD+M +GFE QIR II QIRPD+Q L+++AT ++++ L +
Sbjct: 328 KKATNLQRCTYIVLDEADQMFSLGFEYQIRSIIGQIRPDKQILLFTATMKKKIRQLCVDM 387
Query: 308 LKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKEN-KTIIFIETKR 366
L D + I +G + N +I Q + V ++ + E +L LL+ + +N K +IF
Sbjct: 388 LIDPIVITIGENENQVNEDIKQ-LPVIVD-DDEGRLRWLLQNLKTYLQNGKVLIFANQMG 445
Query: 367 RVDDITRKMKR 377
+ + + ++K+
Sbjct: 446 QCESLLSEIKQ 456
>UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Phaeosphaeria nodorum|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 1149
Score = 234 bits (573), Expect = 2e-60
Identities = 131/317 (41%), Positives = 188/317 (59%), Gaps = 7/317 (2%)
Query: 66 KPFKKDFYVPHLDVEKRPESDVEAWRSENE-ITLKGRNIPKPTLTFDEAGFPDYVMDEID 124
+PF+KDFY ++ + DV R E + I +K ++P+P + + G MD
Sbjct: 466 EPFRKDFYTEPAEITQMSAEDVADLRHELDGIKVKPDDVPRPVTKWAQMGLLQQTMDVFT 525
Query: 125 KMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIA 184
++G+A+PT IQAQ PIA SG D++G+A TGSGKTL++ +P I H+ +Q DGPI
Sbjct: 526 RVGYARPTAIQAQAIPIAESGRDLIGVAKTGSGKTLAFGIPMIRHVLDQRPLKPADGPIG 585
Query: 185 LVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQ-ARDLDAGVEIVIATPGRLL 243
L+LAPTREL+ QI F N S I C +GG P Q A G+ I+ AT GRL+
Sbjct: 586 LILAPTRELSLQIVNELKPFLNASGITIKCAYGGQPISDQIAMIKRGGIHILCATAGRLI 645
Query: 244 DFLE--SGRT-NLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREV 300
D L+ SGR + +R TY+VLDEADRM DMGFEPQ+ KI+ IRPDRQT+++SAT+P+ +
Sbjct: 646 DLLQSNSGRVLSFRRITYVVLDEADRMFDMGFEPQVMKILASIRPDRQTILFSATFPKTM 705
Query: 301 QSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKE-TKLSTLLKEIMAEKEN-KT 358
+LA + L ++ +G A I V YEK+ KL L + ++ EN +
Sbjct: 706 AALARKALDKPAEVIIGGRSKVAPEITQHITIVPPSYEKKIAKLLHHLGQTFSDDENAQV 765
Query: 359 IIFIETKRRVDDITRKM 375
+IF E + +D+ K+
Sbjct: 766 LIFTERQETAEDLLSKL 782
>UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1;
Ostreococcus tauri|Rep: Putative RNA helicase, DRH1 -
Ostreococcus tauri
Length = 1118
Score = 233 bits (569), Expect = 7e-60
Identities = 135/317 (42%), Positives = 190/317 (59%), Gaps = 27/317 (8%)
Query: 88 EAWRSENEITLKG-----RNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIA 142
E +R E++I++K R++ +P +TFD+A FP + + G+ PTPIQA+ WPI
Sbjct: 62 EDFRKEHQISIKNACERTRDL-EPYVTFDDAKFPAALRKALKAQGYDAPTPIQAEAWPIL 120
Query: 143 LSGHDMVGIASTGSGKTLSYILPAIVHI-----NNQPKSSRGDG--------PIALVLAP 189
L G D+V IA TGSGKT ++LPA+ I P+ DG P +VLAP
Sbjct: 121 LKGKDVVAIAKTGSGKTCGFLLPALAKIVAEGTQKAPEMQLVDGRWRPGAVTPSVIVLAP 180
Query: 190 TRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLE-- 247
TRELA QI + C KF + + L+GGA KG Q R L +G ++V+ATPGRL DFLE
Sbjct: 181 TRELAIQIHDECAKFCPAAGCRSAVLYGGAAKGDQLRALRSGADVVVATPGRLNDFLEPP 240
Query: 248 ---SGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLA 304
+ + + Y+VLDEADRMLDMGFEPQI+KI + RQT+M++ATWP+ VQ +A
Sbjct: 241 PGFTAPVSAVKAAYVVLDEADRMLDMGFEPQIKKIFKLCPSARQTVMFTATWPKGVQKIA 300
Query: 305 SEFLKD--YLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFI 362
F ++QI G +L AN +I Q ++V E EK + +LK+ + + E I+F
Sbjct: 301 DAFTTKPIHIQIGSGGDKLTANKSITQTVEVVEEEEKFDRCVAILKKELGKNET-CIMFA 359
Query: 363 ETKRRVDDITRKMKRDG 379
TKRR D + R++K+ G
Sbjct: 360 GTKRRCDFLDRRLKQVG 376
>UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20;
Ascomycota|Rep: ATP-dependent RNA helicase DBP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 523
Score = 231 bits (566), Expect = 2e-59
Identities = 133/315 (42%), Positives = 187/315 (59%), Gaps = 12/315 (3%)
Query: 71 DFYVPHLDVEKRPESDVEAWRSENEITLKGRN--IPKPTLTFDEAGFPDYVMDEIDKMGF 128
+FYV + P+SD++ + ENEI ++ +P L+FD + EI K F
Sbjct: 75 EFYVQSEALTSLPQSDIDEYFKENEIAVEDSLDLALRPLLSFDYLSLDSSIQAEISK--F 132
Query: 129 AKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLA 188
KPTPIQA WP LSG D+VG+A TGSGKT ++ +PAI H+ N K G LV++
Sbjct: 133 PKPTPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHLMNDQKKR---GIQVLVIS 189
Query: 189 PTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLES 248
PTRELA QI + + + C++GG PK Q L ++V+ATPGRLLD L+
Sbjct: 190 PTRELASQIYDNLIVLTDKVGMQCCCVYGGVPKDEQRIQLKKS-QVVVATPGRLLDLLQE 248
Query: 249 GRTNLKRCTYLVLDEADRMLDMGFEPQIRKII-EQIRPDRQTLMWSATWPREVQSLASEF 307
G +L + YLVLDEADRML+ GFE I+ II E RQTLM++ATWP+EV+ LAS F
Sbjct: 249 GSVDLSQVNYLVLDEADRMLEKGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTF 308
Query: 308 LKDYLQINVGSL-QLAANHNILQIIDVCMEYEKETKLSTLLKEIMA--EKENKTIIFIET 364
+ + +++++G+ QL AN I QI++V KE KL LLK+ + +K K +IF
Sbjct: 309 MNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKYHSGPKKNEKVLIFALY 368
Query: 365 KRRVDDITRKMKRDG 379
K+ + R +K +G
Sbjct: 369 KKEAARVERNLKYNG 383
>UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5;
n=4; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 5 - Arabidopsis thaliana (Mouse-ear cress)
Length = 537
Score = 230 bits (563), Expect = 4e-59
Identities = 127/318 (39%), Positives = 192/318 (60%), Gaps = 11/318 (3%)
Query: 69 KKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTL--TFDEAGFPDYVMDEIDKM 126
KKD VP +E + E+ + + +T KG K TF E+ P+ V+D
Sbjct: 77 KKD--VPEKKLEAEDLGEGESEQQKVVVTGKGVEEAKYAALKTFAESNLPENVLDCCKT- 133
Query: 127 GFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDG----P 182
F KP+PIQ+ WP L G D++GIA TGSGKTL++ +PAI+H+ + K G P
Sbjct: 134 -FEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVNP 192
Query: 183 IALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRL 242
LVL+PTRELA QI +V + + + C++GG+ KGPQ + +GV+IVI TPGRL
Sbjct: 193 TCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGRL 252
Query: 243 LDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQS 302
D +ES L +++VLDEADRMLDMGFE +R I+ RQ +M+SATWP +V
Sbjct: 253 RDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNTNKVRQMVMFSATWPLDVHK 312
Query: 303 LASEFL-KDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIF 361
LA EF+ + +++ +GS+ LAANH+++QII+V E ++ +L LL++ ++N+ ++F
Sbjct: 313 LAQEFMDPNPIKVIIGSVDLAANHDVMQIIEVLDERARDQRLIALLEKYHKSQKNRVLVF 372
Query: 362 IETKRRVDDITRKMKRDG 379
K + + R +++ G
Sbjct: 373 ALYKVEAERLERFLQQRG 390
>UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomycetaceae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 816
Score = 230 bits (563), Expect = 4e-59
Identities = 129/331 (38%), Positives = 200/331 (60%), Gaps = 14/331 (4%)
Query: 60 WDLSRLKPFKKDFYVPHLDVEKRPESDVEAWR-SENEITLKGRNIPKPTLTFDEAGFPDY 118
+ LKPF K+FY ++ K E +V R S + + ++GR+ P+P L + + G
Sbjct: 187 YSADELKPFIKNFYQEPEEISKLSEEEVADLRLSLDNVQVRGRDCPRPILKWSQLGLNSG 246
Query: 119 VMDEIDK-MGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQ-PKS 176
+M+ + + + F PTPIQAQ P +SG D++GI+ TGSGKT+S+ILP + I Q P
Sbjct: 247 IMNLLTRELEFTVPTPIQAQAIPAIMSGRDVIGISKTGSGKTVSFILPLLRQIKAQRPLG 306
Query: 177 SRGDGPIALVLAPTRELAQQIQEVCDKFANTS-KIHNTCLFGGAPKGPQARDLDAGVEIV 235
GP+ L+L+PTRELA QI E KF + I + C GG+ Q D+ GVEIV
Sbjct: 307 GDETGPLGLILSPTRELALQIHEEVTKFTSGDPSIRSLCCTGGSELKRQINDIKRGVEIV 366
Query: 236 IATPGRLLDFLESGRTNL---KRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMW 292
IATPGR +D L NL KR ++V+DEADR+ D+GFEPQ+ +I++ IRPD+Q +++
Sbjct: 367 IATPGRFIDLLSLNSGNLINPKRIVFVVMDEADRLFDLGFEPQVNQIMKCIRPDKQCVLF 426
Query: 293 SATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMA 352
SAT+P +++S AS+ L D + I V S L N NI Q +++ +E K +L+ +
Sbjct: 427 SATFPNKLKSFASKILHDPVYITVNSKSL-INENIEQKVEIFS--NEEDKFKSLIHWLAL 483
Query: 353 EKEN----KTIIFIETKRRVDDITRKMKRDG 379
++N KTI+F+ +++ D + +++ +G
Sbjct: 484 TQQNLNDEKTIVFVSSQQICDILYNRLEANG 514
>UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 640
Score = 230 bits (562), Expect = 5e-59
Identities = 119/314 (37%), Positives = 186/314 (59%), Gaps = 5/314 (1%)
Query: 67 PFKKDFYVPHLDVEKRPESDVEAWRSE-NEITLKGRNIPKPTLTFDEAGFPDYVMDEIDK 125
P +K+ Y+P ++ + ++D+E R I + G N+ P + + + G P +M +
Sbjct: 59 PIRKNIYIPSSEISSKSQTDIEDLRKRLGNIVVHGLNVLCPIVNWTDCGLPAPLMSHLRL 118
Query: 126 MGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIAL 185
GF +PT IQ Q P LSG D++G A TGSGKTL++I+P ++H+ QP + + + A+
Sbjct: 119 RGFKQPTSIQCQAIPCILSGRDIIGCAVTGSGKTLAFIIPCLLHVLAQPPTGQYEAA-AV 177
Query: 186 VLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDF 245
+L+PTRELA Q C K + + CL GG Q R + G ++IATPGR +D
Sbjct: 178 ILSPTRELAYQTHIECQKIFSLMDKKSACLVGGNDIENQLRAIKNGSNVIIATPGRFIDL 237
Query: 246 LESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLAS 305
L S N+K+ +YLV+DEADRM D+GFEPQ+ +I E++R DRQTLM+SAT+P V+ +A
Sbjct: 238 LSSSAFNIKKVSYLVIDEADRMFDLGFEPQVIRIAERMRKDRQTLMFSATFPHTVERIAR 297
Query: 306 EFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETK 365
+ L++ ++I VG L+ NI Q I V E K L +L + + + ++F T+
Sbjct: 298 KLLQNSIEIVVG-LRNVVTPNINQSILVTNEDNKFNSLLKILGDYTT--QGQALVFTNTQ 354
Query: 366 RRVDDITRKMKRDG 379
R +D+ K+ + G
Sbjct: 355 DRAEDLFGKLNKSG 368
>UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 1357
Score = 229 bits (561), Expect = 7e-59
Identities = 129/340 (37%), Positives = 207/340 (60%), Gaps = 22/340 (6%)
Query: 55 LRKPKWDLSRLKPFKKDFYVPHLDVEKRPESDVEAWRSE-NEITLKGRNIPKPTLTFDEA 113
L+ ++ L+ F+K+FY+ ++ + E +V+ +R EI +KG+ +P+P ++ ++
Sbjct: 641 LKPIDYNEDELEHFQKNFYIESKEISQMTEDEVKIYRENLGEIQVKGQEVPRPIKSWLQS 700
Query: 114 GFPDYVMDE-IDKMGFAKPTPIQAQGWPIALSGHDMV-----------GIASTGSGKTLS 161
G D +++ I+K + KP PIQ Q P+ +SG DM+ IA TGSGKTL+
Sbjct: 701 GLSDRILEVLIEKKKYDKPFPIQCQSLPVIMSGRDMIDFLREQAKSKDSIAETGSGKTLA 760
Query: 162 YILPAIVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPK 221
Y+LP I H++ Q GDGPI L+L PTRELA QI F K +FGG
Sbjct: 761 YLLPMIRHVSAQRPLQEGDGPIGLILVPTRELATQIYLEAKPFLKAYKYEIVAVFGGTGI 820
Query: 222 GPQARDLDAGVEIVIATPGRLLDFLESGR---TNLKRCTYLVLDEADRMLDMGFEPQIRK 278
Q +L G EIV+ATPGRL+D L + TNLKR T +V+DEADRM D+GFEPQI K
Sbjct: 821 KGQLSELKRGCEIVVATPGRLIDVLTTSNGKITNLKRITMVVIDEADRMFDLGFEPQIAK 880
Query: 279 IIEQIRPDRQTLMWSATWPREVQSLASEFLKDY-LQINVGSLQLAANHNILQIIDVCMEY 337
I+ RPD+QT+++SAT+P+ V++LA + ++ +++ VG+ A NI Q+I++
Sbjct: 881 ILATTRPDKQTVLFSATFPKNVENLAKKLMRHKPVEVVVGARGQACT-NITQLIEI---R 936
Query: 338 EKETKLSTLLKEI-MAEKENKTIIFIETKRRVDDITRKMK 376
++ T+L LL+ + + ++ + IIF++ + VD + ++++
Sbjct: 937 DESTRLFRLLELLGIYTEQGQVIIFVDKQIEVDFLYQELR 976
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 229 bits (559), Expect = 1e-58
Identities = 126/306 (41%), Positives = 183/306 (59%), Gaps = 10/306 (3%)
Query: 83 PESDVEAWRSENEITLKGRNI--PKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWP 140
P+ E R ++T+ + P P +F++ +M +I + +P+ IQAQ P
Sbjct: 91 PDQIEEVVRLNLDVTVSSDSTAAPGPIESFNDMCLHPSIMKDIAYHEYTRPSSIQAQAMP 150
Query: 141 IALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLAPTRELAQQIQEV 200
IALSG D++G A TGSGKT ++ +P + H QP RGDGP+ALVLAPTRELAQQI++
Sbjct: 151 IALSGRDLLGCAETGSGKTAAFTIPMLQHCLVQPPIRRGDGPLALVLAPTRELAQQIEKE 210
Query: 201 CDKFANT-SKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYL 259
F+ + + N + GG Q +L AGVEI +ATPGR +D L+ G T+L R +Y+
Sbjct: 211 VQAFSRSLESLKNCIVVGGTNIEKQRSELRAGVEIAVATPGRFIDHLQQGNTSLSRISYV 270
Query: 260 VLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSL 319
VLDEADRMLDMGFEPQIR+I+ + QTL++SAT P E+++LA E+L + +Q+ VG +
Sbjct: 271 VLDEADRMLDMGFEPQIREIMRSLPEKHQTLLFSATMPVEIEALAKEYLANPVQVKVGKV 330
Query: 320 QLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKEN------KTIIFIETKRRVDDITR 373
+ N+ Q + EK +L LL E ++ E TI+F+E K R D++
Sbjct: 331 S-SPTTNVSQTLVKVSGSEKIDRLLDLLVEEASQAEKCGHRFPLTIVFVERKTRCDEVAE 389
Query: 374 KMKRDG 379
+ G
Sbjct: 390 ALVAQG 395
>UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 872
Score = 227 bits (554), Expect = 5e-58
Identities = 131/324 (40%), Positives = 196/324 (60%), Gaps = 11/324 (3%)
Query: 55 LRKPKWDLSRLKPFKKDFYVPHLDVEKRPESDVEAWR-SENEITLKGRNIPKPTLTFDEA 113
+++ K+ + L+PF K FY +V+ + +VE R S I +KG++ PK + +
Sbjct: 222 VKEIKFTIKDLEPFPKSFYSEPDEVKLMTDDEVEEMRLSLGGIKVKGKHCPKLITRWSQL 281
Query: 114 GFPDYVMDEIDK-MGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINN 172
G P +M+ I K + + +PT IQ+Q P +SG D++GI+ TGSGKT+SYILP + I
Sbjct: 282 GLPTDIMNLITKELKYDEPTAIQSQAIPAIMSGRDLIGISKTGSGKTISYILPMLRQIKA 341
Query: 173 QPKSSRGD-GPIALVLAPTRELAQQIQEVCDKFANTSK-IHNTCLFGGAPKGPQARDLDA 230
Q S+ + GP+ L+LAPTRELA QI E +KF + I C GG+ Q DL
Sbjct: 342 QRTLSKNETGPLGLILAPTRELALQINEEVEKFTKQDRSIRTICCTGGSEMKKQINDLKR 401
Query: 231 GVEIVIATPGRLLDFL--ESGRT-NLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 287
GVEIV+ATPGRL+D L SG+ + KR T++V+DEADR+ DMGFEPQI +I++ +RPD+
Sbjct: 402 GVEIVVATPGRLIDILTLNSGKLISTKRITFVVMDEADRLFDMGFEPQITQIMKTVRPDK 461
Query: 288 QTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDV-CMEYEKETKLSTL 346
Q +++SAT+P +++S A+ L D L + + S L N N+ Q + E +K +L +
Sbjct: 462 QCVLFSATFPNKLRSFAARILTDPLTVTINSNNL-VNENVNQSFYIEDNENDKFNRLVNI 520
Query: 347 LKEIMAEKENKTIIFIETKRRVDD 370
L K NK I +R +D+
Sbjct: 521 LDGFY--KVNKNITSNSEEREIDE 542
>UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa
homlogue - Platynereis dumerilii (Dumeril's clam worm)
Length = 712
Score = 225 bits (550), Expect = 1e-57
Identities = 120/294 (40%), Positives = 175/294 (59%), Gaps = 15/294 (5%)
Query: 96 ITLKGRNIPKP-TLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIAST 154
+ + G N PK L FD+A + V + K + +PTPIQ PI LSG D++G A T
Sbjct: 257 VEVSGTNAPKNGILNFDQADLSETVRSNVRKAKYDRPTPIQKWAIPIVLSGKDLMGCAQT 316
Query: 155 GSGKTLSYILPAIVHINNQPKSSRGDG------PIALVLAPTRELAQQIQEVCDKFANTS 208
GSGKT +++LP + I G G P A+++ PTREL QI KFA+++
Sbjct: 317 GSGKTAAFLLPVLTGIIKNDLIEGGSGFGGPQYPAAIIVGPTRELVNQIYLEARKFASST 376
Query: 209 KIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRML 268
+ ++GG G QAR+L+ G +V+ TPGRLLDF+ G+ NL + YL+LDEADRML
Sbjct: 377 CVRPVVVYGGTSVGYQARELEKGAHVVVGTPGRLLDFIGKGKINLSKVKYLILDEADRML 436
Query: 269 DMGFEPQIRKIIEQI----RPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAAN 324
DMGFEP+IRK++ + RQTLM+SAT+ E+Q LA EFL +Y+ + VG + AN
Sbjct: 437 DMGFEPEIRKLVTTFDMPEKGQRQTLMFSATFAAEIQQLAKEFLSEYVFVTVGRVG-GAN 495
Query: 325 HNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRD 378
+I Q + +YEK KL +L + + +T++F+ETKR D + + ++
Sbjct: 496 SDITQEVHQVTKYEKREKLVEILNQAGTD---RTLVFLETKRSADFLAAYLSQE 546
>UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1238
Score = 225 bits (550), Expect = 1e-57
Identities = 122/312 (39%), Positives = 189/312 (60%), Gaps = 12/312 (3%)
Query: 78 DVEKRPESDVEAWRSENEITLK---GRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPI 134
D K + +EA+ E EI +K + +P P L++ AGFP +++ I+++ F PT I
Sbjct: 61 DNYKMTDERLEAFYREKEIIIKTFENQKVPPPFLSWASAGFPIPILESIEQLQFKSPTII 120
Query: 135 QAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQP-----KSSRGDGPIALVLAP 189
Q+ +PI L+G+D++GIA TGSGKT++Y+LP ++ I +Q + + +GP L+L P
Sbjct: 121 QSVVFPIILAGYDVIGIAQTGSGKTIAYLLPGLIQITSQKTEELNNTKKQNGPQMLILVP 180
Query: 190 TRELAQQIQEVCDKFANTSKIHNTCLFGGAP-KGPQARDLDAGVEIVIATPGRLLDFLES 248
TRELA QI+ F ++ C++GG + Q +L I++ATPGRLLDFL
Sbjct: 181 TRELAMQIESEIQLFTQNYRLKTLCIYGGINNRKNQFYNLGRFPNILVATPGRLLDFLRE 240
Query: 249 GRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFL 308
G T L +YLV+DEADR+L++GFE IR+I++QIR DRQT+ +SATWP+ V+ LA +F
Sbjct: 241 GATTLANVSYLVIDEADRLLELGFEDTIREIVQQIRFDRQTVFFSATWPKAVKDLAFDFC 300
Query: 309 K-DYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRR 367
+ + + +G L N NI Q I + +K KL +L + + +K +IF E K+R
Sbjct: 301 QYSPIYVQIGKSNLTINKNIDQEIICLFQKDKLQKLLDILDTL--KISDKVLIFSEQKQR 358
Query: 368 VDDITRKMKRDG 379
+ ++ M G
Sbjct: 359 CEQLSINMADKG 370
>UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n=4;
Plasmodium (Vinckeia)|Rep: ATP-dependent RNA helicase,
putative - Plasmodium berghei
Length = 1312
Score = 224 bits (548), Expect = 3e-57
Identities = 120/307 (39%), Positives = 178/307 (57%), Gaps = 7/307 (2%)
Query: 67 PFKKDFYVPHLDVEKRPESDVEAWRSEN-EITLKGRNIPKPTLTFDEAGFPDYVMDEIDK 125
P KK+ YV ++ E DVE +R N I ++G+N P+P F + G P +++ ++K
Sbjct: 527 PIKKNVYVQVSEITNMTEKDVEMFRKNNGNIVVRGKNCPRPIQYFYQCGLPGKILNILEK 586
Query: 126 MGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIAL 185
F K IQ Q P + G D++ IA TGSGKT+SY+ P I H+ +Q K DGPI +
Sbjct: 587 KNFKKMFSIQMQAIPALMCGRDIIAIAETGSGKTISYLFPLIRHVLHQDKLRNNDGPIGI 646
Query: 186 VLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDF 245
+L PTREL+ Q++ + + ++GG+ G Q L GVEI++ TPGR++D
Sbjct: 647 ILTPTRELSIQVKNEASIYCKAVDLKILAVYGGSNIGAQLNVLKKGVEIIVGTPGRIIDI 706
Query: 246 L---ESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQS 302
L S TNL R +++VLDEADR+LD+GFE QI I+ R D+QT M SAT+P +Q+
Sbjct: 707 LTISNSKVTNLNRASFIVLDEADRLLDLGFESQIHSILNNCRKDKQTAMISATFPNYIQN 766
Query: 303 LASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFI 362
LA + L ++I VG + N+NI Q ++V E +K +L LL E + K +IF+
Sbjct: 767 LAKKLLYKPIEIIVGE-KGKTNNNIYQFVEVLEEKKKLFRLLKLLGEWI--KYGLILIFV 823
Query: 363 ETKRRVD 369
+ D
Sbjct: 824 NKQLEAD 830
>UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Bos taurus|Rep:
Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)
(DEAD box protein 43) (DEAD box protein HAGE) (Helical
antigen). - Bos Taurus
Length = 597
Score = 224 bits (547), Expect = 3e-57
Identities = 115/245 (46%), Positives = 156/245 (63%), Gaps = 14/245 (5%)
Query: 59 KWDLSRLKPFKKDFYVPHLDVEKRPESDVEAWRSENEITL-------KGRNIPKPTLTFD 111
KW + L P KK+FY+ + V+ WR EN + + R +P PT F+
Sbjct: 186 KW--AGLPPVKKNFYIESEKTSSMSQEQVDNWRKENYNIICDDLKDGEKRPLPNPTCNFE 243
Query: 112 EAG--FPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVH 169
+A +P+ VM I+K GF KPTPIQ+Q WPI L G D++G+A TG+GKTLSY++P +H
Sbjct: 244 DAFHCYPE-VMRNIEKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTLSYLMPGFIH 302
Query: 170 INNQPKSSRG-DGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDL 228
I++QP R +GP LVL PTRELA Q+ C +++ + + C++GG + Q +DL
Sbjct: 303 IDSQPVLQRARNGPGMLVLTPTRELALQVDAECSEYSYRG-LKSVCIYGGGDRDGQIKDL 361
Query: 229 DAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 288
G +I+IATPGRL D + LK TYLVLDEAD+MLDMGFEPQI KI+ +RPDRQ
Sbjct: 362 SKGADIIIATPGRLHDLQMNNFVYLKSITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQ 421
Query: 289 TLMWS 293
T+M S
Sbjct: 422 TVMTS 426
>UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_36,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1127
Score = 222 bits (543), Expect = 1e-56
Identities = 127/317 (40%), Positives = 188/317 (59%), Gaps = 13/317 (4%)
Query: 72 FYVPHLDVEKRPESDVEAWRSENEITLK---GRNIPKPTLTFDEAGFPDYVMDEIDKMGF 128
F L + PE V+ + NEI +K G+ P P LT+ FP + + ID + F
Sbjct: 62 FQPQQLASQPMPEK-VKDFLKANEIAIKAIDGQPCPYPFLTWGGTQFPPQIQNVIDGLNF 120
Query: 129 AKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSS----RGDGPIA 184
PTPIQ+ +P+ LSG+D++G+A TGSGKT Y+LP ++ I Q S R +GP
Sbjct: 121 RAPTPIQSVVFPLILSGYDLIGVAETGSGKTFGYLLPGLIQIKCQNYGSNFRNRINGPEI 180
Query: 185 LVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLD 244
L+LAPTREL QI + F + + +GG + QA+ + +I++A PGRL D
Sbjct: 181 LILAPTRELVMQIAQQVSLFMKPNNLTVATAYGGQNRDQQAQQIKRNPDILVACPGRLKD 240
Query: 245 FLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLA 304
FL+ G +L + TYLV+DEADR+LDMGFE +R I+++ R DRQT+ +SATWP+ V++L+
Sbjct: 241 FLQEGILDLSKVTYLVIDEADRLLDMGFEDDVRFIVQRTRQDRQTVFFSATWPKAVRNLS 300
Query: 305 SEF-LKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKEN-KTIIFI 362
+F +D + + VG L N NI Q I +C+ Y + KL TLL + K N K +IF
Sbjct: 301 LDFCAEDPIYVQVGRSNLTVNKNIDQEI-ICL-YNNQ-KLQTLLDILDQLKINDKVLIFA 357
Query: 363 ETKRRVDDITRKMKRDG 379
ET+ + ++ M ++G
Sbjct: 358 ETRISCEQLSVDMTQEG 374
>UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n=1;
Plasmodium vivax|Rep: ATP-dependent RNA helicase,
putative - Plasmodium vivax
Length = 1341
Score = 221 bits (541), Expect = 2e-56
Identities = 119/307 (38%), Positives = 180/307 (58%), Gaps = 9/307 (2%)
Query: 67 PFKKDFYVPHLDVEKRPESDVEAWRSEN-EITLKGRNIPKPTLTFDEAGFPDYVMDEIDK 125
P KK+ YV ++ ESDV+ +R N I ++G+N P+P F + G P ++ +++
Sbjct: 627 PIKKNIYVQVSEITNMKESDVDLFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILPILER 686
Query: 126 MGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIAL 185
F K IQ Q P + G D++ IA TGSGKTLSY+ P I H+ +QP DGPIA+
Sbjct: 687 KQFKKMFGIQMQTIPALMCGRDVIAIAETGSGKTLSYLFPLIRHVLHQPPLRNNDGPIAI 746
Query: 186 VLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDF 245
+L PTREL++Q++ + + ++GG+ G Q L GVEI++ TPGR++D
Sbjct: 747 ILTPTRELSKQVKSEARPYCQAVNLRILAVYGGSNIGTQLNTLKRGVEILVGTPGRIIDI 806
Query: 246 LESGR---TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQS 302
L TNL R +++VLDEADR+LD+GFE QI I+ R D+QT M SAT+P +Q+
Sbjct: 807 LTISNCKVTNLNRVSFVVLDEADRLLDLGFESQIHNILNNCRKDKQTAMISATFPNYIQN 866
Query: 303 LASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFI 362
LA + L ++I VG + N+NI Q ++V E K+ LLK ++ E + +I I
Sbjct: 867 LAKKLLYKPIEIIVGE-KGKTNNNIYQFVEV---LEGGKKIYRLLK-LLGEWSSYGLILI 921
Query: 363 ETKRRVD 369
R+++
Sbjct: 922 FVNRQLE 928
>UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Candida glabrata|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 816
Score = 219 bits (536), Expect = 7e-56
Identities = 125/319 (39%), Positives = 184/319 (57%), Gaps = 9/319 (2%)
Query: 65 LKPFKKDFYVPHLDVEKRPESDVEAWRSE-NEITLKGRNIPKPTLTFDEAGFP-DYVMDE 122
L P K Y +++ E ++ R + + I ++G++ P+P + + G P D +
Sbjct: 207 LDPISKCLYNEPEEIKSYTEDEIADLRLDLDNIKIEGKDCPRPVTKWSQLGIPYDIIRFI 266
Query: 123 IDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGD-G 181
D + TPIQ Q P +SG D++GI+ TGSGKT+SY+LP I H+ Q K G+ G
Sbjct: 267 KDVFSYKSLTPIQTQTIPAIMSGRDVIGISKTGSGKTISYLLPMIRHVKAQKKLRNGETG 326
Query: 182 PIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGR 241
PIA++ APTRELA QI E K + I + C GG+ Q L GVEI IATPGR
Sbjct: 327 PIAVIFAPTRELAVQINEEVQKLISDLDISSICCTGGSDLKKQIDKLKTGVEIAIATPGR 386
Query: 242 LLDFLESGRTNLK---RCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPR 298
+D L NL R +++V+DEADR+ D GFEPQI ++ +RPDRQ +++SAT+P
Sbjct: 387 FIDLLSLNGGNLVSTLRISFVVMDEADRLFDFGFEPQIASVLRTVRPDRQCVLFSATFPS 446
Query: 299 EVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCM-EYEKETKLSTLLKEIMAEK-EN 356
+V + AS FL LQI V + + N I Q +C E +K +L +LLK +E +
Sbjct: 447 KVSNFASRFLDSPLQITVNA-EGMVNERINQKFTICSDESDKFKELLSLLKVFNSETVDE 505
Query: 357 KTIIFIETKRRVDDITRKM 375
KTIIF+ +++ D I +++
Sbjct: 506 KTIIFVSSQQICDIIEKRL 524
>UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 617
Score = 219 bits (536), Expect = 7e-56
Identities = 124/291 (42%), Positives = 171/291 (58%), Gaps = 18/291 (6%)
Query: 96 ITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTG 155
+ G+++P+P L F + +M+ I F KPTP+Q PI G D++ A TG
Sbjct: 142 VDASGKDVPEPILDFSSPPLDELLMENIKLASFTKPTPVQKYSIPIVTKGRDLMACAQTG 201
Query: 156 SGKTLSYILPAIVHINNQPKS----------SRGDGPIALVLAPTRELAQQIQEVCDKFA 205
SGKT ++ P + S SR P ALVLAPTRELA QI E KF
Sbjct: 202 SGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRELATQIFEEARKFT 261
Query: 206 NTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEAD 265
S + ++GGAP G Q R++D G ++++ATPGRL D LE G+ +L YLVLDEAD
Sbjct: 262 YRSWVRPCVVYGGAPIGNQMREVDRGCDLLVATPGRLNDLLERGKVSLANIKYLVLDEAD 321
Query: 266 RMLDMGFEPQIRKIIEQIR----PDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQL 321
RMLDMGFEPQIR I+E+ +RQTLM+SAT+P ++Q LA +FL +Y+ ++VG +
Sbjct: 322 RMLDMGFEPQIRHIVEECDMPSVENRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVG- 380
Query: 322 AANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDIT 372
+ + NI Q I + + K S LL + AE + T+IF+ETKR D +T
Sbjct: 381 STSENITQRI---LYVDDMDKKSALLDLLSAEHKGLTLIFVETKRMADQLT 428
>UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomyces cerevisiae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 849
Score = 218 bits (532), Expect = 2e-55
Identities = 122/293 (41%), Positives = 174/293 (59%), Gaps = 9/293 (3%)
Query: 65 LKPFKKDFYVPHLDVEKRPESDVEAWR-SENEITLKGRNIPKPTLTFDEAGFPDYVMDEI 123
L+PF+K+FY+ V E +VE R S + I +KG PKP + + G M I
Sbjct: 211 LEPFQKNFYIESETVSSMSEMEVEELRLSLDNIKIKGTGCPKPVTKWSQLGLSTDTMVLI 270
Query: 124 -DKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQ-PKSSRGDG 181
+K+ F TPIQ+Q P +SG D++GI+ TGSGKT+SY+LP + + Q P S G
Sbjct: 271 TEKLHFGSLTPIQSQALPAIMSGRDVIGISKTGSGKTISYLLPLLRQVKAQRPLSKHETG 330
Query: 182 PIALVLAPTRELAQQIQEVCDKFANT-SKIHNTCLFGGAPKGPQARDLDAGVEIVIATPG 240
P+ L+LAPTRELA QI E KF + I + C GG+ Q DL G EIV+ATPG
Sbjct: 331 PMGLILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITDLKRGTEIVVATPG 390
Query: 241 RLLDFL--ESGRT-NLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 297
R +D L G+ + KR T++V+DEADR+ D+GFEPQI +I++ +RPD+Q +++SAT+P
Sbjct: 391 RFIDILTLNDGKLLSTKRITFVVMDEADRLFDLGFEPQITQIMKTVRPDKQCVLFSATFP 450
Query: 298 REVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVC-MEYEKETKLSTLLKE 349
+++S A L + I + S + N N+ Q +C E EK L L+ E
Sbjct: 451 NKLRSFAVRVLHSPISITINSKGM-VNENVKQKFRICHSEDEKFDNLVQLIHE 502
>UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;
n=22; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
52 - Arabidopsis thaliana (Mouse-ear cress)
Length = 646
Score = 217 bits (531), Expect = 3e-55
Identities = 128/336 (38%), Positives = 194/336 (57%), Gaps = 18/336 (5%)
Query: 52 GASLRKPKWDL--SRLKPFKKDFYV-PHLDVEKRPESDVEAWRSENEITLKGRNIPKPTL 108
G + R WD + PF D P ++ ++ + EA+ + I G N+P P
Sbjct: 88 GWNARSGGWDRRDTETNPFGNDGNADPAVNEQENTVINFEAYE-DIPIETSGDNVPPPVN 146
Query: 109 TFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIV 168
TF E + + I + + KPTP+Q PI +G D++ A TGSGKT ++ P I
Sbjct: 147 TFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIIS 206
Query: 169 HINN-----QPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGP 223
I +P+ RG P+A++L+PTRELA QI + KF+ + + +GG P
Sbjct: 207 GIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQ 266
Query: 224 QARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQI 283
Q R+L+ GV+I++ATPGRL D LE GR +L+ +L LDEADRMLDMGFEPQIRKI++Q+
Sbjct: 267 QIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQM 326
Query: 284 -RPD---RQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEK 339
P RQT+++SAT+PRE+Q LAS+FL +Y+ + VG + ++ I+Q ++ + +K
Sbjct: 327 DMPPPGVRQTMLFSATFPREIQRLASDFLSNYIFLAVGRVG-SSTDLIVQRVEFVHDSDK 385
Query: 340 ETKLSTLLKEIMAE----KENKTIIFIETKRRVDDI 371
+ L LL K+ T++F+ETK+ D +
Sbjct: 386 RSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSL 421
>UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n=2;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium falciparum (isolate 3D7)
Length = 1490
Score = 217 bits (530), Expect = 4e-55
Identities = 116/307 (37%), Positives = 177/307 (57%), Gaps = 7/307 (2%)
Query: 67 PFKKDFYVPHLDVEKRPESDVEAWRSEN-EITLKGRNIPKPTLTFDEAGFPDYVMDEIDK 125
P KK+ YV ++ +SDV+ +R N I ++G+N P+P F + G P ++ ++K
Sbjct: 681 PIKKNIYVQVKEITNMKDSDVDMFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILQILEK 740
Query: 126 MGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIAL 185
F K IQ Q P + G D++ IA TGSGKTLSY+ P I H+ +Q DGPI++
Sbjct: 741 KNFKKMYNIQMQTIPALMCGRDVIAIAETGSGKTLSYLFPVIRHVLHQEPLRNNDGPISI 800
Query: 186 VLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDF 245
+L PTREL+ Q++ + I ++GG+ Q + L GVEI++ TPGR++D
Sbjct: 801 ILTPTRELSIQVKNEAKIYCKAVNIEILAVYGGSNIARQLKVLKKGVEILVGTPGRIIDI 860
Query: 246 LESGR---TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQS 302
L TNL R +++VLDEADR+LD+GFE QI I+ R D+QT M SAT+P +Q+
Sbjct: 861 LTISNCKVTNLNRVSFVVLDEADRLLDLGFESQIYNILRNCRKDKQTAMISATFPNYIQN 920
Query: 303 LASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFI 362
+A + L ++I VG + N+NI Q +++ E +K +L LL E + K +IF+
Sbjct: 921 MAKKLLYKPIEIIVGE-KGKTNNNIYQFVEIIEESKKVFRLLKLLGEWI--KYGLVLIFV 977
Query: 363 ETKRRVD 369
+ D
Sbjct: 978 NKQIEAD 984
>UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,
isoform c; n=4; Caenorhabditis|Rep: Vasa-and belle-like
helicase protein 1, isoform c - Caenorhabditis elegans
Length = 660
Score = 217 bits (530), Expect = 4e-55
Identities = 131/312 (41%), Positives = 182/312 (58%), Gaps = 19/312 (6%)
Query: 82 RPESDVEAWRSEN-EITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWP 140
R +S + + EN + + G ++P F+EAGF VM+ +++ G++KPTP+Q P
Sbjct: 112 RTDSGINFDKYENIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIP 171
Query: 141 IALSGHDMVGIASTGSGKTLSYILPAIVHIN-------NQPKSSRGDG---PIALVLAPT 190
L+ D++ A TGSGKT +++LP I HI P + G P ALVL+PT
Sbjct: 172 TLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPT 231
Query: 191 RELAQQIQEVCDKFANTSKIHNTCLFGGAPK-GPQARDLDAGVEIVIATPGRLLDFLESG 249
RELA QI + KF+ S I L+GG Q L AG I+IATPGRL+D +E G
Sbjct: 232 RELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQG 291
Query: 250 RTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD---RQTLMWSATWPREVQSLASE 306
L C YLVLDEADRMLDMGFEPQIRKI+ Q P R T M+SAT+P+E+Q LA +
Sbjct: 292 FIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQVLAKD 351
Query: 307 FLKD-YLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETK 365
FLKD Y+ + VG + + + NI Q + E EK + L +L + EN ++F+ETK
Sbjct: 352 FLKDNYIFLAVGRVG-STSENIEQRLLWVNEMEKRSNLMEIL--MNEHSENLVLVFVETK 408
Query: 366 RRVDDITRKMKR 377
R +++ + R
Sbjct: 409 RGANELAYFLNR 420
>UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 504
Score = 217 bits (529), Expect = 5e-55
Identities = 129/331 (38%), Positives = 189/331 (57%), Gaps = 23/331 (6%)
Query: 61 DLSRLKPFKKDFY-VPHLDVEKRPESDVEAWRS---------ENEITLKGRNIPKPTLTF 110
+ S +KP +D Y +P+ PE E + + E T+K IP P +F
Sbjct: 29 NFSWMKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVK---IPPPVNSF 85
Query: 111 DEA-GFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVH 169
++A G +M EI K GF KP+PIQ+Q WP+ LSG D +G++ TGSGKTL+++LPA++H
Sbjct: 86 EQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLH 145
Query: 170 INNQ-PKSSRGD-----GPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGP 223
I+ Q + + D P LVL+PTRELAQQI+ K++ + CL+GG +
Sbjct: 146 IDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYNG-YKSVCLYGGGSRPE 204
Query: 224 QARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQI 283
Q GVEIVIATPGRL D G +L TY+VLDEADRMLDMGFE IR+I+ +I
Sbjct: 205 QVEACRGGVEIVIATPGRLTDLSNDGVISLASVTYVVLDEADRMLDMGFEVAIRRILFEI 264
Query: 284 RPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKL 343
RPDR + SATWP V+ L ++ K+ + GSL L + ++ Q + + ++
Sbjct: 265 RPDRLVALTSATWPEGVRKLTDKYTKEAVMAVNGSLDLTSCKSVTQFFEFVPHDSRFLRV 324
Query: 344 STLLKEIMAE--KENKTIIFIETKRRVDDIT 372
++ + A + K IIF+++K D ++
Sbjct: 325 CEIVNFLTAAHGQNYKMIIFVKSKVMADHLS 355
>UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 730
Score = 216 bits (528), Expect = 7e-55
Identities = 122/332 (36%), Positives = 192/332 (57%), Gaps = 35/332 (10%)
Query: 78 DVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQ 137
++ + + D +R + I++KG +P+P ++EAGFPD V + ++G+ +PTPIQ Q
Sbjct: 271 ELSEMSDRDWRIFREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQ 330
Query: 138 GWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGD----GPIALVLAPTREL 193
PI L D++G+A TGSGKT +++LP +V I + PK R + GP A+++APTREL
Sbjct: 331 AIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTREL 390
Query: 194 AQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNL 253
AQQI+E +KF I + GGA + Q L GVE+VIATPGRLLD LE+ L
Sbjct: 391 AQQIEEETNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLL 450
Query: 254 KRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD--------------------------R 287
+CTY++LDEADRMLDMGFEP ++K++E + PD R
Sbjct: 451 NQCTYVILDEADRMLDMGFEPDVQKVLEYM-PDTNMKKDTDEFDNEEALMKGFSTREKYR 509
Query: 288 QTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLL 347
QT+M++AT ++ LA ++L+ +++GS + Q++ + E K KL +L
Sbjct: 510 QTVMFTATMSSAIERLARQYLRRPAVVHIGSAG-KPTERVEQVVYMVPEDRKRKKLVEVL 568
Query: 348 KEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
+ ++ + IIF+ K+ D +++ + + G
Sbjct: 569 E---SQFQPPIIIFVNQKKGADMLSKGLTKLG 597
>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
Protostomia|Rep: ATP-dependent RNA helicase bel -
Drosophila melanogaster (Fruit fly)
Length = 798
Score = 214 bits (522), Expect = 4e-54
Identities = 118/290 (40%), Positives = 175/290 (60%), Gaps = 19/290 (6%)
Query: 100 GRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKT 159
G+N+P +FD+ + + + + + KPTP+Q PI ++G D++ A TGSGKT
Sbjct: 287 GQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKT 346
Query: 160 LSYILPAIV------HI----NNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSK 209
++++P + H+ + + S R P+ LVLAPTRELA QI E KFA S+
Sbjct: 347 AAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELATQIFEEAKKFAYRSR 406
Query: 210 IHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLD 269
+ L+GG Q R+LD G +++ATPGRL D + G+ L+ +LVLDEADRMLD
Sbjct: 407 MRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEADRMLD 466
Query: 270 MGFEPQIRKIIEQIR----PDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANH 325
MGFEPQIR+I+EQ+ RQTLM+SAT+P+++Q LAS+FL +Y+ + VG + + +
Sbjct: 467 MGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDFLSNYIFLAVGRVG-STSE 525
Query: 326 NILQIIDVCMEYEKETKLSTLLKEIM----AEKENKTIIFIETKRRVDDI 371
NI Q I E +K + L LL I K++ T+IF+ETK+ D +
Sbjct: 526 NITQTILWVYEPDKRSYLLDLLSSIRDGPEYTKDSLTLIFVETKKGADSL 575
>UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 630
Score = 212 bits (517), Expect = 1e-53
Identities = 125/303 (41%), Positives = 178/303 (58%), Gaps = 15/303 (4%)
Query: 79 VEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKM-GFAKPTPIQAQ 137
+ ++ + D E R I+ +G +IP P +F E FP +++ + K G PT IQ Q
Sbjct: 160 IRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQ 219
Query: 138 GWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKS---SRGDGPIALVLAPTRELA 194
G P+ALSG DM+GIASTGSGKT++++LP ++ Q R +GP L++ P+RELA
Sbjct: 220 GIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELA 279
Query: 195 QQIQE-VCDKF-----ANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLES 248
+QI + + + F A ++ GG P G QA+D+ G+ IV+ATPGRL D L
Sbjct: 280 RQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVATPGRLSDMLTK 339
Query: 249 GRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFL 308
NL+ C YLVLDEADRMLDMGFE +I+ I + RQTL++SAT PR++Q A L
Sbjct: 340 KIINLEVCRYLVLDEADRMLDMGFEDEIKSIFYFFKAQRQTLLFSATMPRKIQFFAKSAL 399
Query: 309 KDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRV 368
+ +NVG AA+ N+LQ ++ E KL +L E + + K +IF E K V
Sbjct: 400 VKPIVVNVGRAG-AASLNVLQELEF---VRSENKLVRVL-ECLQKTSPKVLIFAEKKVDV 454
Query: 369 DDI 371
D+I
Sbjct: 455 DNI 457
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 212 bits (517), Expect = 1e-53
Identities = 124/331 (37%), Positives = 185/331 (55%), Gaps = 34/331 (10%)
Query: 79 VEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQG 138
+++ + D +R + IT KG IP P ++ ++ P ++++ IDK G+ +PTPIQ Q
Sbjct: 362 LDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQA 421
Query: 139 WPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSR----GDGPIALVLAPTRELA 194
PI L D++G+A TGSGKT ++++P +V I PK R GP A++LAPTRELA
Sbjct: 422 IPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELA 481
Query: 195 QQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLK 254
QQI+E KF I + GG + Q L G EIVIATPGRL+D LE+ L
Sbjct: 482 QQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLS 541
Query: 255 RCTYLVLDEADRMLDMGFEPQIRKIIEQI-----RPD---------------------RQ 288
RCTY+VLDEADRM+DMGFEP ++KI+E + +PD RQ
Sbjct: 542 RCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQ 601
Query: 289 TLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLK 348
T+M++AT P V+ LA +L+ + +GS + + Q + + E EK KL +L+
Sbjct: 602 TVMFTATMPPAVERLARSYLRRPAVVYIGSAG-KPHERVEQKVFLMSESEKRKKLLAILE 660
Query: 349 EIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
+ + IIF+ K+ D + + +++ G
Sbjct: 661 QGF---DPPIIIFVNQKKGCDVLAKSLEKMG 688
>UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 478
Score = 210 bits (514), Expect = 3e-53
Identities = 126/320 (39%), Positives = 187/320 (58%), Gaps = 12/320 (3%)
Query: 68 FKKDFYVPHLDVEKRPESDVEAWRSENEITLKG-RNIPKPTLTFDEAGFPDY-VMDEIDK 125
++K V ++ ++ + DV A R+ + G P F + G D + + +
Sbjct: 13 YEKFERVTYVAPKELADVDVGAARAAADARASGGAEDVAPISRFGQGGALDVDCLRALRR 72
Query: 126 MGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIAL 185
MG+ PT +QAQ P+ SGHD + +A TGSGKTL+++LPA I+ Q ++ +GPIAL
Sbjct: 73 MGYESPTAVQAQCLPVIWSGHDALVMAKTGSGKTLAFLLPAYAQISRQRPLTKREGPIAL 132
Query: 186 VLAPTRELAQQIQEVCDKFANTSKIHNTC--LFGGAPKGPQARDLDAGVEIVIATPGRLL 243
VLAPTRELA QI KF C +FGG K Q + L AG EIV+ATPGRL+
Sbjct: 133 VLAPTRELASQIANEAHKFTKFGVSGARCCAIFGGVSKRDQFKKLRAGAEIVVATPGRLV 192
Query: 244 DFL-ESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQS 302
D L TNL+R TYL LDEADRMLDMGFE +R I + +RPDRQ +M+SAT P +Q
Sbjct: 193 DVLCMKNSTNLRRVTYLALDEADRMLDMGFEKIVRSICQAVRPDRQCVMFSATMPAAMQR 252
Query: 303 LASEFL-KDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIM--AEKENKTI 359
LA + L +D + +++G++ AN ++ Q++ V +E + + + L E + A E + I
Sbjct: 253 LARDVLARDAVTVSIGNVG-GANEDVRQVVYV---FEDDARRAAWLFENLGDAVDEGQAI 308
Query: 360 IFIETKRRVDDITRKMKRDG 379
+F+ K V+++ ++ G
Sbjct: 309 VFVNHKSSVEELVNELATRG 328
>UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 578
Score = 210 bits (513), Expect = 5e-53
Identities = 128/329 (38%), Positives = 184/329 (55%), Gaps = 21/329 (6%)
Query: 56 RKPKWDLSRLKPFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTL-TFDEAG 114
R + D RL+ K++ ++ E+ DV EI + G+++PK T+ TF +
Sbjct: 80 RDSREDPKRLE--KRNQWLEETKEEREKLIDVTVSYENLEIEVTGKDLPKDTIETFYDID 137
Query: 115 FPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQP 174
+ + I K GF P P+Q PI L D++ A TGSGKT +++ P I I P
Sbjct: 138 LGEELDHNIFKAGFYHPMPVQKATIPIVLDKRDLMSCAQTGSGKTAAFLFPIISDILKNP 197
Query: 175 KSSRGDG--------PIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQAR 226
R P+AL+LAPTREL QQI E +F + I + C++GG+ Q +
Sbjct: 198 PMPRQSNFSHRVTVFPVALILAPTRELGQQIYEEAVRFTEDTPIRSVCVYGGSDSYTQIQ 257
Query: 227 DLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIE--QIR 284
++ G +I++ATPGRLL F E +L YL+ DEADRMLDMGFEPQIR+I E ++
Sbjct: 258 EMGKGCDILVATPGRLLYFTEKKIVSLSSVRYLIFDEADRMLDMGFEPQIREICEDNEMP 317
Query: 285 P--DRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETK 342
P RQTLM+SAT+P+++Q LA++FL DY+ I VG A + I + + E+E K
Sbjct: 318 PVGKRQTLMFSATFPKQIQRLAADFLDDYVFITVG----RAGSTVESIQQIILWVEEEIK 373
Query: 343 LSTLLKEI--MAEKENKTIIFIETKRRVD 369
+L + A K KT+IF+ETKR D
Sbjct: 374 QEAILDVLGEFAGKGQKTVIFVETKRGAD 402
>UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 487
Score = 210 bits (513), Expect = 5e-53
Identities = 120/299 (40%), Positives = 170/299 (56%), Gaps = 16/299 (5%)
Query: 83 PESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIA 142
P+ +E R + I ++G +IP P TF E FP ++ + K G PTPIQ QG P
Sbjct: 22 PKEKIERIRKKWHILVEGDDIPPPVKTFKEMKFPRPILAALKKKGITHPTPIQVQGLPAV 81
Query: 143 LSGHDMVGIASTGSGKTLSYILPAIVHINNQPKS---SRGDGPIALVLAPTRELAQQIQE 199
L+G DM+GIA TGSGKTL + LP I+ Q K+ R +GP +++ P+RELA+Q E
Sbjct: 82 LTGRDMIGIAFTGSGKTLVFTLPIIMFSLEQEKAMPFQRNEGPYGMIVVPSRELARQTFE 141
Query: 200 VCDKFANTSKIH-------NTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTN 252
V F+ + H N C+ GG+ Q+ + GV +V+ATPGRL+D L+
Sbjct: 142 VITHFSRALEAHGFPSLRTNLCI-GGSSIKEQSDAMKRGVHMVVATPGRLMDLLDKRIIT 200
Query: 253 LKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDYL 312
L C YLVLDEADRM+DMGFE +R I + RQTL++SAT P+++Q+ A L +
Sbjct: 201 LDVCRYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKPV 260
Query: 313 QINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDI 371
+NVG AA+ +++Q + EY K+ L E + + +IF E K VDDI
Sbjct: 261 TVNVGRAG-AASLDVIQEV----EYVKQEAKVVYLLECLQKTPPPVLIFAEKKSDVDDI 314
>UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1;
Chironomus tentans|Rep: Ded1-like DEAD-box RNA helicase
- Chironomus tentans (Midge)
Length = 776
Score = 209 bits (510), Expect = 1e-52
Identities = 119/289 (41%), Positives = 170/289 (58%), Gaps = 20/289 (6%)
Query: 100 GRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKT 159
G+ +P+ +FD+ + + I + KPTP+Q PI LSG D++ A TGSGKT
Sbjct: 259 GQQVPEHITSFDDIKLTEIIRTNIKMARYDKPTPVQKYAIPIILSGRDLMSCAQTGSGKT 318
Query: 160 LSYILPAIVHI----------NNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSK 209
++++P + + +N+P R P+ LVLAPTRELA QI E KF+ S+
Sbjct: 319 AAFLVPILNRMLEQGASMNPASNRPYQRRKQYPLGLVLAPTRELATQIYEEAKKFSYRSR 378
Query: 210 IHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLD 269
+ L+GG Q R+LD G +++ATPGRL D + G+ L+ +LVLDEADRMLD
Sbjct: 379 MRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLDDIINRGKIGLENLRFLVLDEADRMLD 438
Query: 270 MGFEPQIRKIIE--QIRP--DRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANH 325
MGFEPQIR IIE + P RQTLM+SAT+P+ +Q LAS+FL +Y+ + VG + + +
Sbjct: 439 MGFEPQIRHIIENRDMPPTGQRQTLMFSATFPKNIQELASDFLSNYIFLAVGRVG-STSE 497
Query: 326 NILQIIDVCMEYEKETKLSTLLKEIMA-----EKENKTIIFIETKRRVD 369
NI Q I E EK + L LL + ++ T+IF+ETK+ D
Sbjct: 498 NITQTILWVNENEKRSYLLDLLSRLREGSPDYSPDSLTLIFVETKKGAD 546
>UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;
Metazoa|Rep: ATP-dependent RNA helicase DDX3X - Homo
sapiens (Human)
Length = 662
Score = 209 bits (510), Expect = 1e-52
Identities = 119/297 (40%), Positives = 173/297 (58%), Gaps = 20/297 (6%)
Query: 100 GRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKT 159
G N P +F + + +M I+ + +PTP+Q PI D++ A TGSGKT
Sbjct: 172 GNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKT 231
Query: 160 LSYILPAIVHI-------------NNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFAN 206
+++LP + I N R PI+LVLAPTRELA QI E KF+
Sbjct: 232 AAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSY 291
Query: 207 TSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADR 266
S++ ++GGA G Q RDL+ G +++ATPGRL+D +E G+ L C YLVLDEADR
Sbjct: 292 RSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADR 351
Query: 267 MLDMGFEPQIRKIIEQ--IRPD--RQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLA 322
MLDMGFEPQIR+I+EQ + P R T+M+SAT+P+E+Q LA +FL +Y+ + VG + +
Sbjct: 352 MLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVG-S 410
Query: 323 ANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
+ NI Q + E +K + L LL K++ T++F+ETK+ D + + +G
Sbjct: 411 TSENITQKVVWVEESDKRSFLLDLLN--ATGKDSLTLVFVETKKGADSLEDFLYHEG 465
>UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;
n=2; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 35 - Arabidopsis thaliana (Mouse-ear cress)
Length = 591
Score = 207 bits (505), Expect = 4e-52
Identities = 117/306 (38%), Positives = 169/306 (55%), Gaps = 14/306 (4%)
Query: 75 PHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPI 134
P L + K + R + I + G +IP P F + FP V+D + + G +PTPI
Sbjct: 113 PPLHIRKMSSKQRDLIRKQWHIIVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPI 172
Query: 135 QAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKS---SRGDGPIALVLAPTR 191
Q QG P+ L+G DM+GIA TGSGKTL ++LP I+ + + G+GPI L++ P+R
Sbjct: 173 QVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSR 232
Query: 192 ELAQQIQEVCDKF------ANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDF 245
ELA+Q EV ++F A + + GG Q + GV IV+ATPGRL D
Sbjct: 233 ELARQTYEVVEQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDM 292
Query: 246 LESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLAS 305
L + +L C YL LDEADR++D+GFE IR++ + + RQTL++SAT P ++Q A
Sbjct: 293 LAKKKMSLDACRYLTLDEADRLVDLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFAR 352
Query: 306 EFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETK 365
L + +NVG AAN +++Q + EY K+ L E + + +IF E K
Sbjct: 353 SALVKPVTVNVGRAG-AANLDVIQEV----EYVKQEAKIVYLLECLQKTSPPVLIFCENK 407
Query: 366 RRVDDI 371
VDDI
Sbjct: 408 ADVDDI 413
>UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y
chromosome-related; n=3; Apicomplexa|Rep: DEAD box
polypeptide, Y chromosome-related - Cryptosporidium
hominis
Length = 702
Score = 206 bits (503), Expect = 7e-52
Identities = 119/293 (40%), Positives = 177/293 (60%), Gaps = 20/293 (6%)
Query: 95 EITLKGRNIPKPTLTFDEA-GFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIAS 153
E+T N KP +F E G + ++D I ++ + +PTP+Q P L+G D++ A
Sbjct: 187 EMTGSDTNKIKPMQSFMELEGIHEILLDNIRRVKYERPTPVQKFSIPTVLNGRDLMACAQ 246
Query: 154 TGSGKTLSYILPAIVHINNQ-----PKSS-----RGDGPIALVLAPTRELAQQIQEVCDK 203
TGSGKT +++ P ++ + N P+ S R P+ALVL+PTRELA Q E K
Sbjct: 247 TGSGKTAAFLFPIVMKMLNDGPPPTPQQSSLRIKRMAYPVALVLSPTRELAIQTYEESRK 306
Query: 204 FANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDE 263
F + I L+GG+ Q DLD G +I++ATPGRL D ++ G+ NLK +L+LDE
Sbjct: 307 FCFGTGIRTNVLYGGSEVRSQIMDLDRGSDIIVATPGRLRDLIDRGKVNLKLIKFLILDE 366
Query: 264 ADRMLDMGFEPQIRKIIEQIR-----PDRQTLMWSATWPREVQSLASEFLKDYLQINVGS 318
ADRMLDMGF PQIR+I+E RQT+M+SAT+PRE+Q LA +FL +Y+ + VG
Sbjct: 367 ADRMLDMGFAPQIREIVEDSEMPHSLDGRQTVMFSATFPREIQQLAKDFLHNYIFLTVGR 426
Query: 319 LQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDI 371
+ A + +I+Q + + E++ K L+K ++ + E T++F+E KRR D I
Sbjct: 427 VG-ATSGSIVQRV---VYAEEDHKPRLLVKLLLEQGEGLTVVFVEMKRRADQI 475
>UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;
n=8; Viridiplantae|Rep: DEAD-box ATP-dependent RNA
helicase 21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 733
Score = 205 bits (501), Expect = 1e-51
Identities = 118/321 (36%), Positives = 183/321 (57%), Gaps = 24/321 (7%)
Query: 79 VEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQG 138
+E+ E D +R + I+ KG IP+P +++E+ ++ +++ G+ KP+PIQ
Sbjct: 284 LEEMTERDWRIFREDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAA 343
Query: 139 WPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRG---DGPIALVLAPTRELAQ 195
P+ L D++GIA TGSGKT +++LP + +I+ P S +GP A+V+APTRELAQ
Sbjct: 344 IPLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQ 403
Query: 196 QIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKR 255
QI+E KFA+ T + GG Q + G EIVIATPGRL+D LE L +
Sbjct: 404 QIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQ 463
Query: 256 CTYLVLDEADRMLDMGFEPQIRKIIE-----QIRPD------------RQTLMWSATWPR 298
C Y+VLDEADRM+DMGFEPQ+ +++ ++P+ R T M+SAT P
Sbjct: 464 CNYVVLDEADRMIDMGFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPP 523
Query: 299 EVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKT 358
V+ LA ++L++ + + +G+ + I Q + + E EK +L LL E+ E
Sbjct: 524 GVERLARKYLRNPVVVTIGTAGKTTD-LISQHVIMMKESEKFFRLQKLLDEL---GEKTA 579
Query: 359 IIFIETKRRVDDITRKMKRDG 379
I+F+ TK+ D I + + + G
Sbjct: 580 IVFVNTKKNCDSIAKNLDKAG 600
>UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP3 -
Ustilago maydis (Smut fungus)
Length = 585
Score = 205 bits (500), Expect = 2e-51
Identities = 121/292 (41%), Positives = 170/292 (58%), Gaps = 16/292 (5%)
Query: 104 PKPTLTFDEA-GFPDYVMDE-IDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLS 161
P P + F E G D + + +D GF+ PTPIQA WP+ L D+VGIA TGSGKT +
Sbjct: 153 PLPMVDFRELDGKVDAAVKKTLDSQGFSTPTPIQACCWPVLLQNKDVVGIAETGSGKTFA 212
Query: 162 YILPAIVHI-------NNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTC 214
+ LPA+ H+ ++ K ++G LV+APTRELA Q +E K + I C
Sbjct: 213 FGLPALQHLVTKHKVLDSGKKKAKGAQVNVLVIAPTRELAIQTEENMAKLGKSMGIGMIC 272
Query: 215 LFGGAPKGPQARDLDAG--VEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGF 272
L+GG K Q R L+ V IV+ TPGR+LD G +L TYLVLDEADRMLD GF
Sbjct: 273 LYGGVSKQEQVRLLNQSPPVRIVVGTPGRVLDMARDGSLDLSGVTYLVLDEADRMLDKGF 332
Query: 273 EPQIRKIIEQIR---PDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQ 329
EP IR II + R T M+SATWP V+ LA F+ +++ VGS +L+AN + Q
Sbjct: 333 EPDIRAIIGMCKSREEGRHTSMFSATWPPAVRGLAESFMNGPVRVTVGSDELSANRRVEQ 392
Query: 330 IIDVCME-YEKETKLSTLLKEIMAEK-ENKTIIFIETKRRVDDITRKMKRDG 379
++V + Y KE +L+ L+ + A++ ++K +IF K+ I + ++R G
Sbjct: 393 TVEVLADGYAKERRLNDFLRSVNAQRSKDKILIFALYKKEAQRIEQTLRRGG 444
>UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa
homolog - Ciona savignyi (Pacific transparent sea
squirt)
Length = 770
Score = 203 bits (496), Expect = 5e-51
Identities = 114/293 (38%), Positives = 170/293 (58%), Gaps = 11/293 (3%)
Query: 96 ITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTG 155
+ + G N PK TF+ AG P+ V+ + + + +PTP+Q PI + D++ A TG
Sbjct: 301 VEVSGVNAPKSIPTFEVAGLPETVLANVKRANYERPTPVQKYSIPIINADRDLMACAQTG 360
Query: 156 SGKTLSYILPAIVH-INNQPKSSR---GDGPIALVLAPTRELAQQIQEVCDKFANTSKIH 211
SGKT +++LP + I N +SS+ P A+V+ PTREL QI KF+ + +
Sbjct: 361 SGKTAAFLLPVLTKLITNGLQSSQFSEKQTPRAIVVGPTRELIYQIFLEARKFSRGTVVR 420
Query: 212 NTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMG 271
+GG Q RDL G I+IATPGRL+DF+ G L +++LDEADRMLDMG
Sbjct: 421 PVVAYGGTSMNHQIRDLQRGCHILIATPGRLMDFINRGLVGLDHVEFVILDEADRMLDMG 480
Query: 272 FEPQIRKIIEQ----IRPDRQTLMWSATWPREVQSLASEFLK-DYLQINVGSLQLAANHN 326
FE +IRK+ + DR TLM+SAT+P E+Q LA +FL+ D+L + VG + A
Sbjct: 481 FETEIRKLASSPGMPSKSDRHTLMFSATFPDEIQRLAHDFLREDFLFLTVGRVGGACTDV 540
Query: 327 ILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
II V + +K KL L+ ++ AE ++T++F+ETKR D + + ++G
Sbjct: 541 TQSIIQVDQD-DKRAKLLELISDV-AETRSRTLVFVETKRGADFLACMLSQEG 591
>UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;
Cryptosporidium|Rep: U5 snRNP 100 kD protein, putative -
Cryptosporidium parvum Iowa II
Length = 529
Score = 202 bits (493), Expect = 1e-50
Identities = 114/307 (37%), Positives = 185/307 (60%), Gaps = 15/307 (4%)
Query: 84 ESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIAL 143
E D + +R + I ++G+++P P + + + + I +G+ KPTPIQ Q PI L
Sbjct: 118 ERDWKIFREDYSINVRGKDVPNPIRNWKDCHVLEIQTELIRNIGYEKPTPIQMQCIPIGL 177
Query: 144 SGHDMVGIASTGSGKTLSYILPAIVHINNQP----KSSRGDGPIALVLAPTRELAQQIQE 199
DM+GIA TGSGKT+++++P I ++ N+P K+S+ +GP L+LAP RELA QI++
Sbjct: 178 KLRDMIGIAETGSGKTIAFLIPLISYVGNKPILDYKTSQ-EGPYGLILAPARELALQIED 236
Query: 200 VCDKFANTS----KIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKR 255
K N + +I + GG QA L GVEI+IATPGR+ D LE T L +
Sbjct: 237 EAQKLLNKTHELKRIRTLSIVGGRNIDQQAFSLRKGVEIIIATPGRMQDCLEKTLTVLVQ 296
Query: 256 CTYLVLDEADRMLDMGFEPQIRKIIEQIRPD--RQTLMWSATWPREVQSLASEFLKDYLQ 313
C+Y++LDEADRM+D+GF+ + I++QI P+ R T M+SAT +E++++A +L +
Sbjct: 297 CSYVILDEADRMIDLGFQDSLNFILDQIPPEIQRTTHMFSATMQKELENIAKRYLNSPIN 356
Query: 314 INVGSLQLAANHNILQIIDVCMEYEKE-TKLSTLLKEIMAEKENKTIIFIETKRRVDDIT 372
+ +G + A +I QI++ E +K+ T ++TL + +A I+F+ K+ VD +
Sbjct: 357 VTIGDIG-AGKKSIQQILNFISENKKKSTLINTLNNKELAVP--PIIVFLNQKKMVDIVC 413
Query: 373 RKMKRDG 379
R++ G
Sbjct: 414 REIVSHG 420
>UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 594
Score = 201 bits (491), Expect = 2e-50
Identities = 114/293 (38%), Positives = 166/293 (56%), Gaps = 14/293 (4%)
Query: 88 EAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHD 147
E R + IT++G ++P P +F E F ++ +++ G KPTPIQ QG P LSG D
Sbjct: 159 ERIRRKFGITVEGEDVPPPLRSFKEMKFHKGILLGLEQKGITKPTPIQVQGIPAVLSGRD 218
Query: 148 MVGIASTGSGKTLSYILPAIVHINNQPKS---SRGDGPIALVLAPTRELAQQIQEVCDKF 204
++GIA TGSGKTL ++LP I+ Q + R +GP L++ P+RELA+Q ++ +
Sbjct: 219 IIGIAFTGSGKTLVFVLPLIMFCLEQEVALPFGRNEGPYGLIICPSRELAKQTYDIIQHY 278
Query: 205 ANTSKIHNT-----CL-FGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTY 258
N+ + H+ CL GG P + GV I++ATPGRL+D L+ L C Y
Sbjct: 279 TNSLRHHHCPEIRCCLAIGGVPVSESLDVISRGVHIMVATPGRLMDMLDKKMVKLGVCRY 338
Query: 259 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGS 318
L +DEADRM+DMGFE +R I RQTL++SAT P+++Q+ A L + INVG
Sbjct: 339 LCMDEADRMIDMGFEEDVRTIFSFFEGQRQTLLFSATMPKKIQNFARSALVKPVTINVGR 398
Query: 319 LQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDI 371
AA+ N++Q + EY K+ L E + + +IF E K+ VD I
Sbjct: 399 AG-AASMNVIQEV----EYVKQEAKIVYLLECLKKTPPPVLIFAEKKQDVDAI 446
>UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5;
Eukaryota|Rep: ATP-dependent RNA helicase vasa -
Drosophila melanogaster (Fruit fly)
Length = 661
Score = 201 bits (490), Expect = 3e-50
Identities = 108/276 (39%), Positives = 165/276 (59%), Gaps = 7/276 (2%)
Query: 96 ITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTG 155
+ + G ++P+P F A D ++D ++K G+ PTPIQ P+ SG D++ A TG
Sbjct: 233 VKVTGSDVPQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTG 292
Query: 156 SGKTLSYILPAIVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCL 215
SGKT +++LP + + P P ++++PTRELA QI KFA S + +
Sbjct: 293 SGKTAAFLLPILSKLLEDPHELELGRPQVVIVSPTRELAIQIFNEARKFAFESYLKIGIV 352
Query: 216 FGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQ 275
+GG Q + G +VIATPGRLLDF++ + ++VLDEADRMLDMGF
Sbjct: 353 YGGTSFRHQNECITRGCHVVIATPGRLLDFVDRTFITFEDTRFVVLDEADRMLDMGFSED 412
Query: 276 IRKIIEQI--RPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDV 333
+R+I+ + RP+ QTLM+SAT+P E+Q +A EFLK+Y+ + +G + A + ++ Q I
Sbjct: 413 MRRIMTHVTMRPEHQTLMFSATFPEEIQRMAGEFLKNYVFVAIGIVGGACS-DVKQTIYE 471
Query: 334 CMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVD 369
+Y K +KL EI++E+ + TI+F+ETKR D
Sbjct: 472 VNKYAKRSKLI----EILSEQADGTIVFVETKRGAD 503
>UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A;
n=50; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
35A - Oryza sativa subsp. japonica (Rice)
Length = 627
Score = 201 bits (490), Expect = 3e-50
Identities = 113/311 (36%), Positives = 172/311 (55%), Gaps = 14/311 (4%)
Query: 70 KDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFA 129
K + P L + + P + + R + I + G ++P P F + P+ ++ ++ + G
Sbjct: 144 KTGWKPPLRLRRMPRAKADELRRKWHILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIV 203
Query: 130 KPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSR---GDGPIALV 186
+PTPIQ QG P+ LSG DM+GIA TGSGKTL ++LP I+ + G+GP ++
Sbjct: 204 QPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMI 263
Query: 187 LAPTRELAQQIQEVCDKF------ANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPG 240
+ P+RELA+Q +V ++F A +I GG Q + GV IV+ATPG
Sbjct: 264 ICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIGGVDMRAQLDVVKKGVHIVVATPG 323
Query: 241 RLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREV 300
RL D L + NL C YL LDEADR++D+GFE IR++ + + RQTL++SAT P+++
Sbjct: 324 RLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPKKI 383
Query: 301 QSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTII 360
Q+ A L + +NVG AAN +++Q + EY KE L E + + ++
Sbjct: 384 QNFAKSALVKPVIVNVGRAG-AANLDVIQEV----EYVKEDARIIYLLECLQKTPPPVLV 438
Query: 361 FIETKRRVDDI 371
F E K VD I
Sbjct: 439 FCENKADVDYI 449
>UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to vasa-like protein - Nasonia vitripennis
Length = 732
Score = 200 bits (489), Expect = 4e-50
Identities = 112/295 (37%), Positives = 172/295 (58%), Gaps = 12/295 (4%)
Query: 95 EITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIAST 154
E+ G ++P P +FDEA + I K G+ KPTP+Q G PI LSG D++ A T
Sbjct: 289 EVKTSGEDVPPPISSFDEANLRVLLNTNIKKSGYTKPTPVQKYGIPILLSGRDLMACAQT 348
Query: 155 GSGKTLSYILPAIVHINNQPK------SSRGDGPIALVLAPTRELAQQIQEVCDKFANTS 208
GSGKT ++++P I + + + S+ P AL+++PTREL QI + KF+ S
Sbjct: 349 GSGKTAAFLIPIIHTLLAKDRDLSDMSSANQVEPRALIISPTRELTIQIFDEARKFSKDS 408
Query: 209 KIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRML 268
+ ++GG Q + + GV+I++ATPGRLLD + G+ ++VLDEADRML
Sbjct: 409 VLKCHIIYGGTSTSHQMKQIFQGVDILVATPGRLLDLVGKGKITFDAIEFVVLDEADRML 468
Query: 269 DMGFEPQIRKII--EQIRP--DRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAAN 324
DMGF P + K++ + ++P +RQTLM+SAT+P+E+Q LA++FL +Y+ + VG + A
Sbjct: 469 DMGFLPDVEKVLRHDTMKPPGERQTLMFSATFPQEIQQLAAKFLNNYVFVTVGIVGSACT 528
Query: 325 HNILQIIDVCMEYEKETKLSTLL-KEIMAEKENKTIIFIETKRRVDDITRKMKRD 378
+I Q + +K TKL LL +EI N ++F+ K+ D I + D
Sbjct: 529 -DIEQSFFEVKKSDKRTKLKELLNEEIEQNMLNGILVFVSEKKTADFIAALLSED 582
>UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Dugesia
japonica (Planarian)
Length = 781
Score = 200 bits (487), Expect = 6e-50
Identities = 111/278 (39%), Positives = 164/278 (58%), Gaps = 11/278 (3%)
Query: 110 FDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVH 169
FDE + + I + +PTPIQ P L D++ A TGSGKT ++++P I H
Sbjct: 186 FDELKLDPTIRNNILLASYQRPTPIQKNAIPAILEHRDIMACAQTGSGKTAAFLIPIINH 245
Query: 170 IN----NQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQA 225
+ NQ + S+ P L+LAPTRELA QI KF+ + + + ++GGA Q
Sbjct: 246 LVCQDLNQQRYSKTAYPKCLILAPTRELAIQILSESQKFSLNTPLRSCVVYGGADTHSQI 305
Query: 226 RDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP 285
R++ G +++ATPGRL+DF+E + +L+ C Y+VLDEADRMLDMGFEPQIRKIIE+
Sbjct: 306 REVQMGCHLLVATPGRLVDFIEKNKISLEFCKYIVLDEADRMLDMGFEPQIRKIIEESNM 365
Query: 286 ----DRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKET 341
+RQTLM+SAT+P+E+Q LA++FL +Y+ + VG + + + +I Q I + EK
Sbjct: 366 PSGINRQTLMFSATFPKEIQKLAADFLYNYIFMTVGRVG-STSDSIKQEIIYMTDVEKLN 424
Query: 342 KLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
L + +IF+ETK+ D + R + G
Sbjct: 425 YLKNIFN--TTAPNTLILIFVETKKGADSLARFLLSKG 460
>UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep:
Vasa-like protein - Anopheles gambiae (African malaria
mosquito)
Length = 596
Score = 199 bits (486), Expect = 8e-50
Identities = 110/289 (38%), Positives = 168/289 (58%), Gaps = 10/289 (3%)
Query: 93 ENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIA 152
E ++ + G N P +F+ +G + VM + K + KPTPIQ PI L+G D++ A
Sbjct: 159 EIQVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACA 218
Query: 153 STGSGKTLSYILPAIVHINNQPKSS--RGDGPIALVLAPTRELAQQIQEVCDKFANTSKI 210
TGSGKT +++LP I H+ ++ S R P +++APTRELA QI + KFA+ +K+
Sbjct: 219 QTGSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKL 278
Query: 211 HNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDM 270
+GG Q + + G +++ATPGRLLDF++ G + ++VLDEADRMLDM
Sbjct: 279 KVCVSYGGTAVQHQLQLMRGGCHVLVATPGRLLDFIDRGYVTFENVNFVVLDEADRMLDM 338
Query: 271 GFEPQIRKIIEQI----RPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHN 326
GF P I K++ + RQTLM+SAT+P E+Q LA +FL +Y+ + VG + A +
Sbjct: 339 GFLPSIEKVMGHATMPEKQQRQTLMFSATFPAEIQELAGKFLHNYICVFVGIVG-GACAD 397
Query: 327 ILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKM 375
+ Q I + +++K KL +L T++F+ETKR D + M
Sbjct: 398 VEQTIHLVEKFKKRKKLEEILN---GGNPKGTLVFVETKRNADYLASLM 443
>UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp3 - Schizosaccharomyces pombe (Fission
yeast)
Length = 578
Score = 199 bits (485), Expect = 1e-49
Identities = 115/281 (40%), Positives = 166/281 (59%), Gaps = 15/281 (5%)
Query: 106 PTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILP 165
P L FDE + + + + +PTPIQA WP L+G D+VGIA TGSGKT+++ +P
Sbjct: 165 PILQFDELDVSAKLREGLKN--YKEPTPIQAATWPYLLAGRDVVGIAETGSGKTVAFGIP 222
Query: 166 AIVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQA 225
A+ ++N S P LV++PTRELA Q E + + + ++GGAPK QA
Sbjct: 223 ALQYLNGL--SDNKSVPRVLVVSPTRELAIQTYENLNSLIQGTNLKAVVVYGGAPKSEQA 280
Query: 226 RDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP 285
R ++I TPGRLLD + G + + YLVLDEADRMLD GFE IR II P
Sbjct: 281 RAAK-NASVIIGTPGRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFEQDIRNIISH-TP 338
Query: 286 D------RQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCME-YE 338
D RQT+ +SATWP V++LA+ FLKD ++I +GS +LAA+ NI QI+++ +
Sbjct: 339 DPTRNGSRQTVFFSATWPESVRALAATFLKDPVKITIGSDELAASQNITQIVEILDDPRS 398
Query: 339 KETKLSTLLKEIMAE--KENKTIIFIETKRRVDDITRKMKR 377
KE L LL++ ++ K++K +IF+ K+ + + R
Sbjct: 399 KERMLDNLLRKHLSSGGKDDKILIFVLYKKEAARVEGTLAR 439
>UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVLGA
- Dugesia japonica (Planarian)
Length = 726
Score = 198 bits (484), Expect = 1e-49
Identities = 116/282 (41%), Positives = 166/282 (58%), Gaps = 14/282 (4%)
Query: 109 TFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI- 167
+F E V I + +PTP+Q PI + D++ A TGSGKT ++++P +
Sbjct: 212 SFLELKLHPIVSHNISLTQYTRPTPVQRYAVPIIMQRRDLMACAQTGSGKTAAFLIPLLS 271
Query: 168 VHINNQPKSS------RGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPK 221
+ + P +S + + P+AL+LAPTRELA QI + KF+ S + ++GG
Sbjct: 272 MMYQDGPGNSLSHSGYKKEYPVALILAPTRELAVQIYDEARKFSYRSLVRPCVVYGGRDI 331
Query: 222 GPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIE 281
Q +D+ G +++ATPGRL D LE + L YLVLDEADRMLDMGFEPQIRKI+E
Sbjct: 332 RGQLQDISQGCNMLVATPGRLSDMLERCKIGLDCIRYLVLDEADRMLDMGFEPQIRKIVE 391
Query: 282 QIR----PDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEY 337
Q RQTLM+SAT+PRE+Q LAS+FLKDYL + VG + + + NI Q I E
Sbjct: 392 QTNMPPPGQRQTLMFSATFPREIQMLASDFLKDYLFLRVGKVG-STSQNITQRIVYVDEN 450
Query: 338 EKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
EK L +L +I + ++ ++F+ETKR D + + +G
Sbjct: 451 EKRDHLLDILTDI--DSDSLILVFVETKRGADALEGFLHTEG 490
>UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_85,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 957
Score = 198 bits (483), Expect = 2e-49
Identities = 115/313 (36%), Positives = 172/313 (54%), Gaps = 27/313 (8%)
Query: 84 ESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIAL 143
+ D+E +R++N IT+ + F D+ + F +PT IQ++ PI L
Sbjct: 38 QEDIEKFRTDNNITIVRDGEQDNDII---QPFLDWKHFPLGPPEFQQPTAIQSEVIPIVL 94
Query: 144 SGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLAPTRELAQQI------ 197
SG + + IA TGSGKTL+Y+LPA+VH+ P L+L PTREL QI
Sbjct: 95 SGRNALAIAQTGSGKTLAYLLPALVHLEQHAMIMESPQPKLLILVPTRELGVQIYDQLLQ 154
Query: 198 ----------QEVCDKFANTSKIHNTCLFGGAP-KGPQARDLDAGVEIVIATPGRLLDFL 246
Q + N + + C++GG P K Q + G+ +++ATPGRL++ +
Sbjct: 155 LIEFYYGNKKQNEKENSPNLTNLKIVCIYGGNPNKKQQVELIQKGIHVIVATPGRLIELI 214
Query: 247 ESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASE 306
+ G NL + T L+LDEADRMLDMGFEPQ+R I+ IR DRQT++ SATWP EVQ L+ E
Sbjct: 215 DEGMVNLNKITMLILDEADRMLDMGFEPQVRDIVSTIREDRQTILLSATWPNEVQQLSKE 274
Query: 307 FLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKR 366
F D + + +G I Q I + EK L +L +++ +K +IF ETK+
Sbjct: 275 FCYDPILVKIGK-----GAPITQKIICTGQKEKLHVLMNVLDDLI--YTDKVLIFAETKK 327
Query: 367 RVDDITRKMKRDG 379
R +D+++ + + G
Sbjct: 328 RCEDLSQSLTKQG 340
>UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3;
Eumetazoa|Rep: Vasa-related protein CnVAS1 - Hydra
magnipapillata (Hydra)
Length = 797
Score = 198 bits (482), Expect = 3e-49
Identities = 105/286 (36%), Positives = 164/286 (57%), Gaps = 13/286 (4%)
Query: 103 IPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSY 162
IP F EA +++ ++K + KPTP+Q PI D++ A TGSGKT ++
Sbjct: 348 IPSAIREFAEANIDRTILENVEKAHYIKPTPVQKYAIPIITGNRDLMSCAQTGSGKTAAF 407
Query: 163 ILPAI---VHINNQPKSSRGD--GPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFG 217
++P + + ++ SS + P+ALV+APTRELA QIQ+ KFA + I ++G
Sbjct: 408 LIPVLNTLMQFRSELTSSLSEVQAPLALVIAPTRELAVQIQKEARKFAQNTSIKPVVIYG 467
Query: 218 GAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIR 277
G R + +++ TPGRL DFL + +L YL+LDEADRMLDMGF P+I+
Sbjct: 468 GVQVAYHLRQVQQDCHLLVGTPGRLKDFLGKRKISLANLKYLILDEADRMLDMGFLPEIK 527
Query: 278 KIIEQI----RPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDV 333
II + DR TLM+SAT+P E+Q+LA+EFL +Y+ + +G ++ H+ I
Sbjct: 528 AIINDFDMPPKEDRHTLMFSATFPTEIQNLAAEFLNNYVYLTIG--KVGGTHS--DITQC 583
Query: 334 CMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
ME E+ K L++ + E N+ ++F++TKR D + + ++G
Sbjct: 584 IMEVEESAKRDKLIEILDTEGTNRNLVFVQTKRLADFLASYLCQNG 629
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 197 bits (480), Expect = 5e-49
Identities = 109/282 (38%), Positives = 167/282 (59%), Gaps = 8/282 (2%)
Query: 102 NIPKPT-LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTL 160
++ KP TFD+ G ++ I + G+ PTPIQA+ P+ LSG D++G A TG+GKT
Sbjct: 4 SVAKPVDATFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTA 63
Query: 161 SYILPAIVHINNQPKSSRGDG--PI-ALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFG 217
S+ LP I + Q +S P+ AL+L PTRELA Q+ +A + + + +FG
Sbjct: 64 SFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFG 123
Query: 218 GAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIR 277
G PQ +L GVEI+IATPGRLLD ++ NL + LVLDEADRMLDMGF P ++
Sbjct: 124 GVDMNPQMAELRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLPDLQ 183
Query: 278 KIIEQIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEY 337
+I+ + +RQTL++SAT+ E++ LAS +L++ I V AA+ + QI+ E
Sbjct: 184 RILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNAAAS-TVTQIVYDVAEG 242
Query: 338 EKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
+K+ + L+++ + I+F +K + R+++RDG
Sbjct: 243 DKQAAVVKLIRD---RSLKQVIVFCNSKIGASRLARQIERDG 281
>UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=3; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma brucei
Length = 660
Score = 197 bits (480), Expect = 5e-49
Identities = 111/283 (39%), Positives = 165/283 (58%), Gaps = 16/283 (5%)
Query: 106 PTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILP 165
P L+F E +++ + + G+ KPTP+Q+ G P AL+ D++ A TGSGKT SY++P
Sbjct: 155 PVLSFSEMNMVPVLLENVKRCGYTKPTPVQSLGIPTALNHRDLMACAQTGSGKTASYLIP 214
Query: 166 AI----VHINNQPKSSRGD--GPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGA 219
AI ++I+N+P S G P AL+LAPTREL+ QI KF + + ++GGA
Sbjct: 215 AINEILLNISNRPPYSPGSHSSPQALILAPTRELSLQIYGEARKFTYHTPVRCVVVYGGA 274
Query: 220 PKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKI 279
Q +L G ++++ATPGRL+D G +L+LDEADRMLDMGFEPQIR I
Sbjct: 275 DPRHQVHELSRGCKLLVATPGRLMDMFSRGYVRFSEIRFLILDEADRMLDMGFEPQIRMI 334
Query: 280 IEQIRPD------RQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDV 333
++ D RQTL++SAT+P E+Q LA EF+ + + VG + + NI Q +
Sbjct: 335 VQGPDSDMPRAGQRQTLLYSATFPVEIQRLAREFMCRHSFLQVGRVG-STTENITQDVRW 393
Query: 334 CMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMK 376
+ +K L TLL+E + ++F+E KR D + R ++
Sbjct: 394 IEDPDKRQALLTLLRE---NEGKLVLVFVEKKRDADYLERFLR 433
>UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 568
Score = 197 bits (480), Expect = 5e-49
Identities = 114/313 (36%), Positives = 181/313 (57%), Gaps = 27/313 (8%)
Query: 84 ESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIAL 143
+ D +R + I+ +G NIPKP ++ E+G P ++ I+++G+ +P+PIQ Q PI L
Sbjct: 243 DRDWRIFREDFGISARGGNIPKPLRSWRESGIPASILSTIEEVGYKEPSPIQRQAIPIGL 302
Query: 144 SGHDMVGIASTGSGKTLSYILPAIVHINNQPK---SSRGDGPIALVLAPTRELAQQIQEV 200
D++GIA TGSGKT S+++P + +I+ PK ++ GP AL+L PTRELAQQI+
Sbjct: 303 QNRDLIGIAETGSGKTASFLIPLLAYISKLPKLDEHTKALGPQALILVPTRELAQQIETE 362
Query: 201 CDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLV 260
+KFA + + GG QA L G EIVIATPGRL D +E L +CTY+V
Sbjct: 363 TNKFAGRLGLRCVSIVGGRDMNDQAYALRDGAEIVIATPGRLKDCIERHVLVLSQCTYVV 422
Query: 261 LDEADRMLDMGFEPQIRKIIE-----QIRPD---------------RQTLMWSATWPREV 300
+DEAD+M+DMGFEPQ+ I++ ++PD R T+++SAT P V
Sbjct: 423 MDEADKMVDMGFEPQVNFILDSLPVSNLKPDNAIPEGSADDMVGKYRVTMLYSATMPPSV 482
Query: 301 QSLASEFLKDYLQINVGSLQLAANHNILQIID-VCMEYEKETKLSTLLKEIMAEKENKTI 359
+ +A +L+ I +G A + QI++ + E ++ T+L ++L++ + I
Sbjct: 483 ERMARVYLRRPATITIGDAGQAV-ATVEQIVEFIPTEDQRRTRLISILQQ--SSHLVPII 539
Query: 360 IFIETKRRVDDIT 372
+F+ K+ D ++
Sbjct: 540 VFVNQKKAADQLS 552
>UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa
protein - Apis mellifera (Honeybee)
Length = 630
Score = 196 bits (479), Expect = 6e-49
Identities = 117/291 (40%), Positives = 170/291 (58%), Gaps = 20/291 (6%)
Query: 95 EITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIAST 154
++ + G N+P+P +F+ AG + V+D I K G+ KPTP+Q PI ++G D++ A T
Sbjct: 183 QVNVSGDNVPQPIESFEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMNGRDLMACAQT 242
Query: 155 GSGKTLSYILPAIVHINNQPK----SSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKI 210
GSGKT ++ +P I + + +S P ++++PTREL QI + KF+ S +
Sbjct: 243 GSGKTAAFAVPIINTLLERSVDLVVTSTYCEPQVVIVSPTRELTIQIWQQIVKFSLNSIL 302
Query: 211 HNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDM 270
+GG Q L AG I++ATPGRLLDF+E GR +LVLDEADRMLDM
Sbjct: 303 KTVVAYGGTSVMHQRGKLSAGCHILVATPGRLLDFVEKGRVKFSSVQFLVLDEADRMLDM 362
Query: 271 GFEPQIRKII--EQIRP--DRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHN 326
GF P I K++ E + P +RQTLM+SAT+P EVQ LA FL +YL + VG + A +
Sbjct: 363 GFLPSIEKMVDHETMVPLGERQTLMFSATFPDEVQHLARRFLNNYLFLAVGIVGGACSDV 422
Query: 327 ILQIIDVCMEYEKETKLSTLLKEIMAEKENK------TIIFIETKRRVDDI 371
+V +K+ LLKEI+ E+EN T++F+E K++ D I
Sbjct: 423 EQNFYEVARNKKKD-----LLKEIL-ERENDSGTLGGTLVFVEMKKKADFI 467
>UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=7;
Eukaryota|Rep: ATP-dependent RNA helicase abstrakt -
Drosophila melanogaster (Fruit fly)
Length = 619
Score = 196 bits (479), Expect = 6e-49
Identities = 115/311 (36%), Positives = 166/311 (53%), Gaps = 14/311 (4%)
Query: 70 KDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFA 129
K + P + + E + EA R E I ++G P +F E FP +++ + G
Sbjct: 139 KTAWKPPRYIREMSEEEREAVRHELRILVEGETPSPPIRSFREMKFPKGILNGLAAKGIK 198
Query: 130 KPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKS---SRGDGPIALV 186
PTPIQ QG P L+G D++GIA TGSGKTL ++LP I+ Q S R +GP L+
Sbjct: 199 NPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLI 258
Query: 187 LAPTRELAQQIQEVCDKFAN------TSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPG 240
+ P+RELA+Q E+ ++ +I + GG P + GV IV+ATPG
Sbjct: 259 ICPSRELAKQTHEIIQHYSKHLQACGMPEIRSCLAMGGLPVSEALDVISRGVHIVVATPG 318
Query: 241 RLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREV 300
RL+D L+ L C YL +DEADRM+DMGFE +R I + RQTL++SAT P+++
Sbjct: 319 RLMDMLDKKILTLDMCRYLCMDEADRMIDMGFEEDVRTIFSFFKGQRQTLLFSATMPKKI 378
Query: 301 QSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTII 360
Q+ A L + INVG AA+ N+ Q + EY K+ L + + + +I
Sbjct: 379 QNFARSALVKPVTINVGRAG-AASMNVTQQV----EYVKQEAKVVYLLDCLQKTAPPVLI 433
Query: 361 FIETKRRVDDI 371
F E K+ VD I
Sbjct: 434 FAEKKQDVDCI 444
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 196 bits (478), Expect = 8e-49
Identities = 106/270 (39%), Positives = 162/270 (60%), Gaps = 4/270 (1%)
Query: 110 FDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVH 169
F G + ++ I + + PTPIQA+ P+ L GHD+VGIA TG+GKT +++LP +
Sbjct: 59 FTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGKTAAFVLPILHR 118
Query: 170 INNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLD 229
I ALVLAPTRELA QI + + ++ + GGA GPQAR ++
Sbjct: 119 IAANRARPAPRACRALVLAPTRELATQIADAARTYGKFTRPSVAVVIGGAKPGPQARRME 178
Query: 230 AGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQT 289
+GV++++ATPGRLLD + +G L +VLDEAD+MLD+GF P IR+I+ ++ RQ
Sbjct: 179 SGVDLLVATPGRLLDHVAAGVIRLDAVETVVLDEADQMLDLGFIPAIRQIMAKLPRQRQA 238
Query: 290 LMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKE 349
+M+SAT P+ +++LA EFL+D ++ V S++ I Q + + EK+ KL+ LL +
Sbjct: 239 VMFSATMPKPIRALAGEFLRDPREVAV-SVESKPVDRIDQQVLLLAPEEKKDKLAWLLAD 297
Query: 350 IMAEKENKTIIFIETKRRVDDITRKMKRDG 379
+ E + I+F TK D +TR ++ G
Sbjct: 298 VAVE---RAIVFTRTKHGADKVTRHLEDAG 324
>UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP3 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 605
Score = 196 bits (478), Expect = 8e-49
Identities = 127/307 (41%), Positives = 173/307 (56%), Gaps = 22/307 (7%)
Query: 92 SENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGI 151
+ N ITL P P L+ + + ++K F KPTPIQA WP LS D+VGI
Sbjct: 160 TSNNITLTPSLFP-PLLSIRDLPINSKLQPFLNK--FEKPTPIQACSWPALLSKKDVVGI 216
Query: 152 ASTGSGKTLSYILPAIVHINNQPK---SSRGDGPIA-----LVLAPTRELAQQIQEVCDK 203
A TGSGKTL++ +P I ++ P S +G G + LVLAPTRELAQQ E
Sbjct: 217 AETGSGKTLAFGVPGINLLSQLPPVTGSKKGRGQVPGQIQMLVLAPTRELAQQSHEHLSA 276
Query: 204 FANTSKIHNTCLFGGAPKGPQARDLDA-GVEIVIATPGRLLDFLESGRTNLKRCTYLVLD 262
F + + C+FGG K QAR+L +V+ TPGR LD +SG +L +YLVLD
Sbjct: 277 FGEQVGLKSVCIFGGVGKDGQARELSQKDTRVVVGTPGRTLDLADSGELDLSSVSYLVLD 336
Query: 263 EADRMLDMGFEPQIRKIIEQI---RPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSL 319
EADRMLD GFE IR+II + RQT+M+SATWP V+ LAS FL + L+I VGS
Sbjct: 337 EADRMLDAGFENDIRRIIAHTPGHKEGRQTVMFSATWPESVRRLASTFLNNPLRITVGSD 396
Query: 320 QLAANHNILQIIDVC-MEYEKETKLSTLLK-EIMAEKENKT-----IIFIETKRRVDDIT 372
+L+AN I QI++V +K+ +L+ LK + +KT ++F K+ +
Sbjct: 397 ELSANKRIEQIVEVLDNPRDKDFRLTHHLKAHLKVHPNSKTSPTRILVFALYKKEAQRLE 456
Query: 373 RKMKRDG 379
++R G
Sbjct: 457 YTIRRAG 463
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 196 bits (477), Expect = 1e-48
Identities = 108/270 (40%), Positives = 151/270 (55%), Gaps = 3/270 (1%)
Query: 110 FDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVH 169
F E G + + G+ TPIQA P+AL+G D++GIA TG+GKT ++ LP I
Sbjct: 4 FSELGLSPTTLQAVADTGYTTATPIQAAAIPVALAGQDVLGIAQTGTGKTAAFTLPLIDK 63
Query: 170 INNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLD 229
+ N +R P ALV+APTRELA Q+ +K+A +K+ L GG G Q + LD
Sbjct: 64 LMNGRAKARM--PRALVIAPTRELADQVASSFEKYAKGTKLSWALLIGGVSFGDQEKKLD 121
Query: 230 AGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQT 289
GV+++IATPGRLLD E G+ + +LV+DEADRMLDMGF P I +I + P +QT
Sbjct: 122 RGVDVLIATPGRLLDHFERGKLLMTGVQFLVVDEADRMLDMGFIPDIERIFKMTPPKKQT 181
Query: 290 LMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKE 349
L +SAT P E+ L +FLKD ++I S N NI Q++ + + K L
Sbjct: 182 LFFSATMPPEITRLTKQFLKDPVRIE-ASRPATTNENITQLMVKVPSSDPKAKRLALRAL 240
Query: 350 IMAEKENKTIIFIETKRRVDDITRKMKRDG 379
I + I+F K VD + + +K G
Sbjct: 241 IEKAQIETGIVFCNRKTEVDVVAKSLKSHG 270
>UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=16; Pezizomycotina|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Coccidioides immitis
Length = 817
Score = 195 bits (476), Expect = 1e-48
Identities = 112/331 (33%), Positives = 186/331 (56%), Gaps = 32/331 (9%)
Query: 79 VEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQG 138
+++ E D ++ + I+ KG +IP P ++ E+G P +++ IDK+G+ P+PIQ
Sbjct: 348 LDQMRERDWRIFKEDFNISTKGGSIPNPMRSWGESGLPKRLLEIIDKVGYKDPSPIQRAA 407
Query: 139 WPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSS-----RGDGPIALVLAPTREL 193
PIAL D++G+A TGSGKT +++LP +V+I P+ + DGP A++LAPTREL
Sbjct: 408 IPIALQNRDLIGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAIILAPTREL 467
Query: 194 AQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNL 253
AQQI+ KF N + + GG Q+ L G EI+IATPGRL+D +E L
Sbjct: 468 AQQIENEARKFCNPLGFNVVSIVGGHSLEEQSFSLRNGAEIIIATPGRLVDCIERRILVL 527
Query: 254 KRCTYLVLDEADRMLDMGFEPQIRKIIEQI-----RPD--------------------RQ 288
+C Y+++DEADRM+D+GFE + KI++ + +PD RQ
Sbjct: 528 SQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDTEEAEDARAMSQHLGGKDRYRQ 587
Query: 289 TLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLK 348
T+M++AT P V+ +A ++L+ + +G++ A + ++ + E +++ +L+ +L
Sbjct: 588 TMMYTATMPSAVERIARKYLRRPAIVTIGNIGEAVDTVEQRVEFISGEDKRKKRLADILA 647
Query: 349 EIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
E I+F+ KR D + R +K+ G
Sbjct: 648 S--GEFRPPIIVFVNIKRNCDAVARDIKQMG 676
>UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 411
Score = 194 bits (473), Expect = 3e-48
Identities = 112/310 (36%), Positives = 168/310 (54%), Gaps = 7/310 (2%)
Query: 72 FYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKP 131
+Y + V + + V+ R +N I ++G + PKP +F + P + + K F P
Sbjct: 4 YYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKNFQVP 63
Query: 132 TPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLAPTR 191
TPIQ Q +SG D++G+A TGSGKTL+Y LP + + + S+ GD P+AL+L PTR
Sbjct: 64 TPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTR 123
Query: 192 ELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRT 251
EL QQ+ + + + + GG P Q L G ++V+ATPGRLLD + G
Sbjct: 124 ELMQQVFMNVSEMLDVIRCPGNPVCGGVPVSTQTIALREGADVVVATPGRLLDLCKRGAL 183
Query: 252 NLKRCTYLVLDEADRMLDMGFEPQIRKII---EQIRPDRQTLMWSATWPREVQSLASEFL 308
L + TYLV+DEADRML MG E Q+RKI+ RQTL+WSAT P ++ LA +
Sbjct: 184 CLDKITYLVMDEADRMLGMGMEEQLRKIVGLATGTSRARQTLLWSATLPESLERLARSAV 243
Query: 309 KDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRV 368
+ + I VG L A ++ Q + Y+K K LL+ + I+F + + V
Sbjct: 244 LNPITIQVGPGGLIA-PSVQQNVVFLYHYQKPQK---LLETLRTTPYPPVIVFTSSIQNV 299
Query: 369 DDITRKMKRD 378
D +T +K++
Sbjct: 300 DYVTELLKQE 309
>UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein;
n=2; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 541
Score = 194 bits (473), Expect = 3e-48
Identities = 113/293 (38%), Positives = 169/293 (57%), Gaps = 15/293 (5%)
Query: 86 DVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSG 145
D+ + + G +IP P + F G + V+ + G+ PTP+Q P L+G
Sbjct: 100 DISVYEGADVKVEAGNHIP-PIIDFPGCGIRNEVLRNVAHNGYKVPTPVQRYSIPYILNG 158
Query: 146 HDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFA 205
D++ + TGSGKT +++LP I + + P + L PTRELA QI E KF
Sbjct: 159 EDLIVTSQTGSGKTAAFMLPVITQLIG---TCHSPNPSCVALCPTRELAIQIFEETRKFC 215
Query: 206 NTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEAD 265
+ + TC+FGGAP Q R+L G++IVIATPGRL+D L+ L +L+LDEAD
Sbjct: 216 KGTDLKTTCVFGGAPITEQIRNLSRGIDIVIATPGRLIDILKQHCITLSEVRFLILDEAD 275
Query: 266 RMLDMGFEPQIRKIIE--QIRP--DRQTLMWSATWPREVQSLASEFLK-DYLQINVGSLQ 320
RMLDMGFEPQ++++I + P DRQT+++SAT+P V++LA +F++ Y +I+VG
Sbjct: 276 RMLDMGFEPQMQEVINGWDMPPADDRQTMLFSATFPDAVRNLARDFMRPKYCRISVGMQD 335
Query: 321 LAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITR 373
A +I Q C E +K ++L ++KE+ + T++F E K VD I R
Sbjct: 336 --APKSIEQRFIYCSEMDKFSELLGVIKEV----DGPTLVFAERKVSVDRIER 382
>UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX4;
n=49; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX4 - Homo sapiens (Human)
Length = 724
Score = 194 bits (473), Expect = 3e-48
Identities = 110/285 (38%), Positives = 168/285 (58%), Gaps = 13/285 (4%)
Query: 96 ITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTG 155
+ + G + P LTF+EA + + I K G+ K TP+Q PI L+G D++ A TG
Sbjct: 276 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTG 335
Query: 156 SGKTLSYILPAIVHINNQP-KSSRG---DGPIALVLAPTRELAQQIQEVCDKFANTSKIH 211
SGKT +++LP + H+ + +SR P +++APTREL QI KF+ + +
Sbjct: 336 SGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVR 395
Query: 212 NTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMG 271
++GG G R + G I+ ATPGRL+D + + LK+ YLVLDEADRMLDMG
Sbjct: 396 AVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMG 455
Query: 272 FEPQIRKIIE----QIRPDRQTLMWSATWPREVQSLASEFLK-DYLQINVGSLQLAANHN 326
F P+++K+I + RQTLM+SAT+P E+Q LA+EFLK +YL + VG + A +
Sbjct: 456 FGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVG-GACRD 514
Query: 327 ILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDI 371
+ Q + ++ K KL +L+ I + +T++F+ETK++ D I
Sbjct: 515 VQQTVLQVGQFSKREKLVEILRNI---GDERTMVFVETKKKADFI 556
>UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14;
Eumetazoa|Rep: Vasa-related protein CnVAS2 - Hydra
magnipapillata (Hydra)
Length = 890
Score = 193 bits (471), Expect = 6e-48
Identities = 114/284 (40%), Positives = 161/284 (56%), Gaps = 14/284 (4%)
Query: 96 ITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTG 155
I L G N PKP +F EA + +D + +PTPIQ P L+ D++ A TG
Sbjct: 438 IELSGTNRPKPIQSFSEANLHPVCLKNLDLAKYKEPTPIQKYAIPAILAKRDVMACAQTG 497
Query: 156 SGKTLSYILPAIVHINNQPKS---SRGDG---PIALVLAPTRELAQQIQEVCDKFANTSK 209
SGKT S++LP I ++ N+ S DG P+A +LAPTREL Q+ KF+ S
Sbjct: 498 SGKTASFLLPIITNLMNEGLDNIDSNIDGVALPLAAILAPTRELVVQLFTEARKFSYNSS 557
Query: 210 IHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLD 269
+ L+GG QA L G +++ATPGRL DF++ G+ N + YL+LDEAD+M+D
Sbjct: 558 LKPVVLYGGVAVAHQADRLRMGCHLLVATPGRLEDFIKRGKVNFQNLKYLILDEADKMID 617
Query: 270 MGFEPQIRKIIE--QIRPD--RQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANH 325
MGF PQI IIE + P R TLM+SAT+P ++Q LA++FL DYL + VG +
Sbjct: 618 MGFGPQIEHIIEFSGMPPKGIRNTLMFSATFPDQIQHLAAQFLNDYLFLTVGRVGGTCTD 677
Query: 326 NILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVD 369
+I V ++ET L LL+ ++T++F+E KR D
Sbjct: 678 VTQSVIQVSGTKKRET-LENLLQ---TSGTDQTLVFVEKKRDAD 717
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 193 bits (470), Expect = 7e-48
Identities = 102/273 (37%), Positives = 159/273 (58%), Gaps = 3/273 (1%)
Query: 107 TLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPA 166
+++F G ++ +D +G++KPTPIQAQ P L G D+ GIA TG+GKT ++ LP+
Sbjct: 5 SVSFKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDLCGIAQTGTGKTAAFALPS 64
Query: 167 IVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQAR 226
I ++ P++ G L+L+PTRELA QI C+ + ++ +FGG P G Q R
Sbjct: 65 IHYLATNPQARPQRGCRMLILSPTRELASQIARACNDYTRHLRMSVNAVFGGVPIGRQMR 124
Query: 227 DLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD 286
LD G +I++ATPGRLLD ++ LK VLDEAD+MLD+GF +R+I + + +
Sbjct: 125 MLDRGTDILVATPGRLLDLIDQRALVLKDVEVFVLDEADQMLDLGFIHALRRIDKLLPKN 184
Query: 287 RQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTL 346
RQTL +SAT P+ +Q L+S+FL D + ++V Q + + Q + EK+ L+
Sbjct: 185 RQTLFFSATMPKTIQELSSQFLSDPVTVSVAP-QSSTAERVEQFGIFVNQSEKQALLTIT 243
Query: 347 LKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
LK ++ ++F TK D + R ++ G
Sbjct: 244 LKN--TPGLDRALVFTRTKHGADRVVRHLEAAG 274
>UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase
PRP28, putative; n=2; Eukaryota|Rep: Pre-mRNA splicing
factor RNA helicase PRP28, putative - Plasmodium vivax
Length = 1006
Score = 193 bits (470), Expect = 7e-48
Identities = 121/338 (35%), Positives = 181/338 (53%), Gaps = 35/338 (10%)
Query: 70 KDFYVPHLDVEKRPESDVEAWR---SENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKM 126
+D + H +KR E WR +NEI +KG +P P ++E+ ++ I K
Sbjct: 540 RDVHNKHWSEKKREEMTDRDWRIFREDNEIYIKGGIVPPPIRRWEESNLSSDLLKAIKKA 599
Query: 127 GFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPK---SSRGDGPI 183
+ KPTPIQ Q PIAL D++GIA TGSGKT +++LP + ++ P + DGP
Sbjct: 600 KYEKPTPIQMQAIPIALEMRDLIGIAETGSGKTAAFVLPMLAYVKQLPPLTYETSQDGPY 659
Query: 184 ALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLL 243
AL++AP+RELA QI + +KFA+ + GG QA +L GVEI+I TPGR+
Sbjct: 660 ALIIAPSRELAIQIFDETNKFASYCSCRTVAVVGGRNAEAQAFELRKGVEIIIGTPGRIH 719
Query: 244 DFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQI-------------------- 283
D LE T L +C Y++LDEADRM+DMGFE + I+++I
Sbjct: 720 DCLEKAYTVLNQCNYVILDEADRMMDMGFEDSVHFILDKIPTTNLKSEDDALALQEEMMA 779
Query: 284 ----RPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEK 339
R R T M+SAT P V+ L+ ++L+ I++G A +I Q ++ E +K
Sbjct: 780 KAGHRLYRLTQMFSATMPPAVERLSRKYLRAPAYISIGD-PGAGKRSIEQKLEFTTEGKK 838
Query: 340 ETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKR 377
+ K L+EI+ E E I+F+ K+ D I + + +
Sbjct: 839 KQK----LQEILEEYEAPIIVFVNQKKVADIIAKSISK 872
>UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6;
Plasmodium|Rep: Snrnp protein, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1123
Score = 192 bits (468), Expect = 1e-47
Identities = 120/325 (36%), Positives = 178/325 (54%), Gaps = 32/325 (9%)
Query: 80 EKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGW 139
E+ + D +R +NEI +KG +P P ++E+ + ++ I K + KPTPIQ Q
Sbjct: 670 EEMTDRDWRIFREDNEIYIKGGVVPPPIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQAI 729
Query: 140 PIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPK---SSRGDGPIALVLAPTRELAQQ 196
PIAL D++GIA TGSGKT +++LP + ++ P + DGP ALV+AP+RELA Q
Sbjct: 730 PIALEMRDLIGIAETGSGKTAAFVLPMLSYVKQLPPLTYETSQDGPYALVIAPSRELAIQ 789
Query: 197 IQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRC 256
I E +KFA+ + GG QA +L GVEIVI TPGRL D LE T L +C
Sbjct: 790 IYEETNKFASYCSCRTVAVVGGRNAEAQAFELRRGVEIVIGTPGRLQDCLEKAYTVLNQC 849
Query: 257 TYLVLDEADRMLDMGFEPQIRKIIEQI------------------------RPDRQTLMW 292
Y++LDEADRM+DMGFE + I+++I R R T M+
Sbjct: 850 NYVILDEADRMMDMGFEDTVHYILDKIPTSNLKSEDDALALQEEMMTKAGHRLYRLTQMF 909
Query: 293 SATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMA 352
SAT P V+ L+ ++L+ I++G A +I Q ++ E +K+ K L+EI+
Sbjct: 910 SATMPPSVERLSRKYLRAPAYISIGD-PGAGKRSIEQKLEFLTEGKKKQK----LQEILE 964
Query: 353 EKENKTIIFIETKRRVDDITRKMKR 377
E I+F+ K+ D I++ + +
Sbjct: 965 MYEPPIIVFVNQKKVADIISKSITK 989
>UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia
franciscana|Rep: VASA RNA helicase - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 726
Score = 192 bits (468), Expect = 1e-47
Identities = 103/279 (36%), Positives = 167/279 (59%), Gaps = 14/279 (5%)
Query: 100 GRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKT 159
G +P +FD AG ++D I K G+ +PTP+Q P+ + D++ A TGSGKT
Sbjct: 296 GEGLPSGIDSFDAAGLRPKILDNIKKSGYTQPTPVQKWAIPVIMKKRDLMACAQTGSGKT 355
Query: 160 LSYILPAIVHINNQPKSSRG----DGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCL 215
+Y++P I + + ++ P A+V+ PTRELA QI + KF+ + I +
Sbjct: 356 GAYLIPIINRLIEEGCAASSYDETQTPEAVVMCPTRELAIQIFKEAVKFSYDTIIKPVVV 415
Query: 216 FGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQ 275
+GG Q+ + +G I++ TPGRL+DF+ G N C +LVLDEADRMLDMGF +
Sbjct: 416 YGGVAPRYQSDKVKSGCNILVGTPGRLIDFMNRGVFNFSACKFLVLDEADRMLDMGFMGE 475
Query: 276 IRKIIEQ----IRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQII 331
++K++ ++ +R TLM+SAT+P EVQ LA+EFL++Y+ + VG++ A + ++
Sbjct: 476 VKKVVYHGTMPVKVERNTLMFSATFPNEVQELAAEFLENYIFVTVGTVGGAC----MDVL 531
Query: 332 DVCMEYEKETKLSTLLKEIMAEKEN-KTIIFIETKRRVD 369
+E + ++++ LL EI+ EKE KT++F +K+ D
Sbjct: 532 QEVIEIDAKSRIDRLL-EILTEKEGVKTLVFASSKKTAD 569
>UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Yarrowia lipolytica (Candida lipolytica)
Length = 974
Score = 192 bits (467), Expect = 2e-47
Identities = 98/266 (36%), Positives = 157/266 (59%), Gaps = 12/266 (4%)
Query: 68 FKKDFYVPHLDVEKRPESDVEAWR-SENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKM 126
F++ FYV ++ E++ R S + I ++G++ PKP + + G P M ++ +
Sbjct: 337 FRRQFYVESSELADMTEAETNELRLSLDGIKIRGKDCPKPISKWTQLGLPGPTMGVLNDL 396
Query: 127 GFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQ--------PKSSR 178
+ KPT IQAQ P +SG D++ +A TGSGKTL+++LP + HI ++ S
Sbjct: 397 RYDKPTSIQAQAIPAVMSGRDVISVAKTGSGKTLAFLLPMLRHIKHRVGVETHTTTLSGA 456
Query: 179 GDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIAT 238
P+ +++ PTREL QI F ++ C +GG+P Q L G I++ T
Sbjct: 457 SSHPLGVIITPTRELCVQIYRDLRPFLAALELTAVCAYGGSPIKDQIAALKKGTHIIVCT 516
Query: 239 PGRLLDFLES--GRT-NLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAT 295
PGR++D L + GR +L R T+LV+DEADRM DMGFEPQ+ K+ + IRPDRQT+++SAT
Sbjct: 517 PGRMIDLLAANQGRVLSLSRVTFLVIDEADRMFDMGFEPQVLKLTQSIRPDRQTVLFSAT 576
Query: 296 WPREVQSLASEFLKDYLQINVGSLQL 321
+P++++ LA L ++G +++
Sbjct: 577 FPKKMEQLARRVLSKRSSDSLGPIEI 602
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 190 bits (464), Expect = 4e-47
Identities = 115/302 (38%), Positives = 166/302 (54%), Gaps = 13/302 (4%)
Query: 81 KRPESD--VEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQG 138
+RP D E RSE + IP F + G D + + +MG+ +PTPIQAQ
Sbjct: 104 ERPMRDETFEHPRSEPIKPVTPVEIPPQDTAFSKLGLNDALAFAVTEMGYTEPTPIQAQA 163
Query: 139 WPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLAPTRELAQQIQ 198
P L+G D+ G A TG+GKT ++ LP + + + R LVL PTRELA Q++
Sbjct: 164 VPAVLAGRDVTGSAQTGTGKTAAFALPILHKLGAHERRLR-----CLVLEPTRELALQVE 218
Query: 199 EVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTY 258
E K++ + + T ++GG G Q DL GV++V ATPGRLLD +E G L
Sbjct: 219 EAFQKYSKYTDLTATVVYGGVGYGKQREDLQRGVDVVAATPGRLLDHIEQGTMTLADVEI 278
Query: 259 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGS 318
LVLDE DRMLDMGF P +++I++Q RQTL +SAT P E+ LAS L+D ++I +G
Sbjct: 279 LVLDEVDRMLDMGFLPDVKRIVQQCPQARQTLFFSATLPPELAQLASWALRDPVEIKIGQ 338
Query: 319 LQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKT-IIFIETKRRVDDITRKMKR 377
+ A + I ++ LL ++++ E K+ IIF TK D I +++R
Sbjct: 339 RRSPA-----ETISHAFYPVVASQKFDLLIDLLSRTEFKSVIIFTRTKMGADRIAHRLQR 393
Query: 378 DG 379
+G
Sbjct: 394 EG 395
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 190 bits (464), Expect = 4e-47
Identities = 113/310 (36%), Positives = 170/310 (54%), Gaps = 27/310 (8%)
Query: 86 DVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSG 145
D ++ + I+ KG P P T+ E+ P +++ I ++G+ KP+PIQ Q PI+L+G
Sbjct: 391 DWHIFKEDFNISTKGGIAPNPIRTWQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTG 450
Query: 146 HDMVGIASTGSGKTLSYILPAIVHINNQP---KSSRGDGPIALVLAPTRELAQQIQEVCD 202
D++GIA TGSGKT ++++P +++I+ QP K + DGP ALV+APTREL QQI++
Sbjct: 451 RDILGIAETGSGKTCAFVIPMLIYISKQPRLTKDTEADGPYALVMAPTRELVQQIEKETR 510
Query: 203 KFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLD 262
FA L GG QA + G EI+IATPGRL D LE L +C Y+VLD
Sbjct: 511 NFAQHFGFRVVSLVGGQSIEDQAYQVSKGCEIIIATPGRLNDCLEKRYLVLNQCNYIVLD 570
Query: 263 EADRMLDMGFEPQIRKII----------------EQIRPDRQ-----TLMWSATWPREVQ 301
EAD M+D+GFEPQ+ ++ E+ DR T+++SAT P V+
Sbjct: 571 EADMMIDLGFEPQVTSVLDAMPSSFLKSEDDEMAEKQESDRSHIYRTTILFSATMPPLVE 630
Query: 302 SLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIF 361
L+ ++L+ I +G + +I V E +K+ L+ L+K+ IIF
Sbjct: 631 KLSKKYLRRPCTITIGEAGKVVDRIRQTVIFVKSENDKKEHLTQLIKD---GPPPPIIIF 687
Query: 362 IETKRRVDDI 371
+ K+ D I
Sbjct: 688 VNKKKHCDII 697
>UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp-3 -
Neurospora crassa
Length = 614
Score = 190 bits (464), Expect = 4e-47
Identities = 113/323 (34%), Positives = 177/323 (54%), Gaps = 27/323 (8%)
Query: 83 PESDVEAWRSENEITLKGRNIP--KPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWP 140
PES++E + E EI +K + +P + F + + + + PTPIQ+ WP
Sbjct: 153 PESEIETFLKEKEIVIKDPSSSNLRPIMNFSQLPQSNLISKN-PFAAYTNPTPIQSASWP 211
Query: 141 IALSGHDMVGIASTGSGKTLSYILPAIVHINNQPK-----SSRGDGPIALVLAPTRELAQ 195
+LSG D++GIA TGSGKT+++ LP + + ++PK R P A++++PTRELA
Sbjct: 212 FSLSGRDVIGIAETGSGKTMAFSLPCVESLASRPKPKFNSRDRTAHPRAVIVSPTRELAM 271
Query: 196 QIQEVCDKFANTSKIHNTCLFGGAPKGPQARDL--DAGVEIVIATPGRLLDFLESGRTNL 253
Q A+ + C+FGG+ K Q L + GV+I+ ATPGRL DFL G +L
Sbjct: 272 QTHAALSGLASLVGLSAVCIFGGSDKNEQRNLLYKNNGVDIITATPGRLKDFLSEGSISL 331
Query: 254 KRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP--DRQTLMWSATWPREVQSLASEFLKDY 311
++ VLDEADRMLD GF I+ I+ P RQTLM++ATWP ++Q LA ++ +
Sbjct: 332 ANVSFAVLDEADRMLDRGFSEDIKLILSGCPPKEQRQTLMFTATWPLDIQKLAESYMINP 391
Query: 312 LQINV-------------GSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIM--AEKEN 356
Q+ + G+++L AN I Q ++V KE +L LLKE ++K++
Sbjct: 392 AQVTIGHRTRAGGDGEGNGNIELQANSRIEQKVEVVDPRGKEFRLYELLKEAQKGSQKDD 451
Query: 357 KTIIFIETKRRVDDITRKMKRDG 379
+ ++F K+ + + + R G
Sbjct: 452 RILVFCLYKKEAVRVEQFLSRKG 474
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 190 bits (462), Expect = 7e-47
Identities = 113/273 (41%), Positives = 155/273 (56%), Gaps = 11/273 (4%)
Query: 107 TLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPA 166
T +F E + + + GF PTPIQAQ P AL+G D++G A+TG+GKT +++LP
Sbjct: 3 TTSFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPL 62
Query: 167 IVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQAR 226
I + +P G ALVLAPTRELA QI E ++F + ++ + GG QA
Sbjct: 63 IDRLAGKP------GTRALVLAPTRELALQIGEELERFGHARRVRGAVIIGGVGMAQQAE 116
Query: 227 DLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD 286
L EIVIATPGRL+D LE G L LVLDEADRMLDMGF+PQ+ +I+ ++
Sbjct: 117 ALRQKREIVIATPGRLVDHLEQGNARLDGIEALVLDEADRMLDMGFKPQLDRILRRLPKQ 176
Query: 287 RQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTL 346
RQTL++SAT EV A L+D +++ V A Q+ + ++EK L TL
Sbjct: 177 RQTLLFSATMAGEVADFARAHLRDPVRVEVARSGTTAARAEQQVF-LADQHEKLPLLLTL 235
Query: 347 LKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
L+ + T+IF TKRR D I + + R G
Sbjct: 236 LE----RDGDSTLIFTRTKRRADKIWKHIGRAG 264
>UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus
vannamei|Rep: Vasa-like protein - Penaeus vannamei
(Penoeid shrimp) (European white shrimp)
Length = 703
Score = 190 bits (462), Expect = 7e-47
Identities = 109/270 (40%), Positives = 163/270 (60%), Gaps = 10/270 (3%)
Query: 109 TFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIV 168
+F +++ I K G+ PTP+Q P ++G D++ A TGSGKT +++LP +
Sbjct: 262 SFQSMNLRPLLLENIVKAGYGCPTPVQKYTIPNVMNGRDIMACAQTGSGKTAAFLLPMLH 321
Query: 169 HI--NNQPKSSRGDG--PIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQ 224
+I NN P ++ + P LV+ PTRELA QI KF+++S +GGA Q
Sbjct: 322 YILDNNCPSNAFEEPAQPTGLVICPTRELAIQIMREARKFSHSSVAKCCVAYGGAAGFHQ 381
Query: 225 ARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQ-- 282
+ + +G I++ATPGRLLDFLE G+ YLVLDEADRMLDMGF I+ +I
Sbjct: 382 LKTIHSGCHILVATPGRLLDFLEKGKIVFSSLKYLVLDEADRMLDMGFLSSIKTVINHKT 441
Query: 283 IRP--DRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKE 340
+ P +R TLM+SAT+P E+Q LAS FL +YL + VG++ AAN ++ Q + ++EK+
Sbjct: 442 MTPTAERITLMFSATFPHEIQELASAFLNNYLFVVVGTVG-AANTDVKQEVLCVPKFEKK 500
Query: 341 TKLSTLLKEIM-AEKENKTIIFIETKRRVD 369
KL + +EI+ + + K ++F+E KR D
Sbjct: 501 AKLVEMCEEILISADDEKILVFVEQKRVAD 530
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 189 bits (460), Expect = 1e-46
Identities = 110/277 (39%), Positives = 161/277 (58%), Gaps = 16/277 (5%)
Query: 109 TFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIV 168
+F + G + + + + + PTPIQAQ P AL+G D+VGIA TG+GKT S+ LP I+
Sbjct: 17 SFQDFGLAEPIARALSEENYVTPTPIQAQTIPTALTGRDVVGIAQTGTGKTASFALP-IL 75
Query: 169 H------INNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKG 222
H I QPK++R LVL+PTREL+ QI + + + ++ +T GG P G
Sbjct: 76 HRLLEHRIKPQPKTTR-----VLVLSPTRELSGQILDSFNAYGRHIRLSSTLAIGGVPMG 130
Query: 223 PQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQ 282
Q R L GVE+++ATPGRLLD ++S L +LVLDEADRMLDMGF IRKI+ +
Sbjct: 131 RQVRSLMQGVEVLVATPGRLLDLVQSNGLKLGSVEFLVLDEADRMLDMGFINDIRKIVAK 190
Query: 283 IRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETK 342
+ RQTL +SAT P+++ LA L+D ++ V + A +I+ V K
Sbjct: 191 LPIKRQTLFFSATMPKDIAELADSMLRDPARVAVTPVSSTAERINQRILQVDFS-AKPAF 249
Query: 343 LSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
L+ LLK+ E N+ ++F TK D + + +++ G
Sbjct: 250 LTKLLKD---EPINRALVFTRTKHGADKVVKTLEKAG 283
>UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Magnaporthe grisea|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 674
Score = 189 bits (460), Expect = 1e-46
Identities = 117/311 (37%), Positives = 167/311 (53%), Gaps = 31/311 (9%)
Query: 95 EITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIAST 154
EI KG NIP P ++E+ P + D I ++G+ +PTP+Q PIAL D++GI+ T
Sbjct: 244 EIVTKGNNIPNPMRFWEESNLPHVLKDTIKQVGYTEPTPVQRAAIPIALQCRDLIGISKT 303
Query: 155 GSGKTLSYILPAIVHINNQP---KSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIH 211
GSGKT +++LP + +I P + ++ +GP AL+LAPTRELA QIQ KFA
Sbjct: 304 GSGKTAAFVLPMLSYIEPLPPLNEVTKTEGPYALILAPTRELATQIQAEVIKFATRMGFT 363
Query: 212 NTCLFGGAPK-GPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDM 270
CL G A L G EI++ATPGRL+D LE L +C+Y+VLDEADRM+D
Sbjct: 364 VVCLIGNKRTIEEDAFALRNGAEIIVATPGRLVDCLERHLLVLSQCSYVVLDEADRMVDG 423
Query: 271 GFEPQIRKIIEQI-----RPD--------------------RQTLMWSATWPREVQSLAS 305
GFE I KI+ + +PD RQT+M+SAT P V+ +A
Sbjct: 424 GFEDSIHKILAALPPSNGKPDDRDAEDPNIMSKFLTPNLRYRQTVMYSATMPPSVERIAK 483
Query: 306 EFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETK 365
+LK + +G++ A + Q + V E E+ KL +L K I+F+ TK
Sbjct: 484 NYLKHPAMVTIGTIGEAVDTVEQQAMWVVSEDERRNKLRAMLNTYGTGK--LVIVFVNTK 541
Query: 366 RRVDDITRKMK 376
D + + +K
Sbjct: 542 SNCDAVAKDLK 552
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 188 bits (458), Expect = 2e-46
Identities = 105/274 (38%), Positives = 162/274 (59%), Gaps = 5/274 (1%)
Query: 107 TLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPA 166
T TF E G + D + ++GF PTPIQ Q P L G D++ A TG+GKT +Y LP
Sbjct: 2 TNTFIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGKTAAYGLPL 61
Query: 167 IVHINNQPKSSRGDG-PIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQA 225
I ++ Q + P AL+LAPTRELAQQ+ + ++A +++ ++GG Q
Sbjct: 62 IQMLSRQSREETAPKHPRALILAPTRELAQQVFDNLKQYAQHTELAIVTVYGGTSIRVQQ 121
Query: 226 RDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP 285
L GV+I+IATPGRLLD L + +T+L + LVLDEADRMLDMGF P I++I++++
Sbjct: 122 EQLAKGVDILIATPGRLLDHLFTKKTSLNQLQMLVLDEADRMLDMGFLPDIQRIMKRMPE 181
Query: 286 DRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLST 345
+RQTL++SAT+ V++LA +K+ +++ V AAN + + +K+ K
Sbjct: 182 ERQTLLFSATFETRVKALAYRLMKEPVEVQVA----AANSTADTVKQMVYPVDKKRKSEL 237
Query: 346 LLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
L I + + ++F +TK+ D + ++K DG
Sbjct: 238 LAYLIGSRNWQQVLVFTKTKQGSDALVSELKLDG 271
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 188 bits (458), Expect = 2e-46
Identities = 99/264 (37%), Positives = 151/264 (57%), Gaps = 4/264 (1%)
Query: 110 FDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVH 169
F + G ++ + +G+ PTPIQ+Q P L+ D+VG+A TG+GKT ++ LP I
Sbjct: 105 FSKLGLDAEIVKALGFLGYTLPTPIQSQAIPAVLNSKDLVGLAQTGTGKTAAFALPLIQQ 164
Query: 170 INNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLD 229
+ P + +G A++L+PTRELA QI E F ++ T GGAP Q RDL
Sbjct: 165 LLMNPIAIKGRSARAIILSPTRELALQIHEAFVSFGKRLPLNFTHAIGGAPIRKQMRDLS 224
Query: 230 AGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQT 289
GV+I++ATPGRL D ++ L +LVLDEAD+MLD+GF P +++II ++ DRQT
Sbjct: 225 KGVDILVATPGRLEDLVDQKGLRLDETKFLVLDEADQMLDIGFLPAVKRIISKVNKDRQT 284
Query: 290 LMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKE 349
L++SAT +E++ L +L D +Q++V N + +I M K+ K L +
Sbjct: 285 LLFSATMSKEIKKLTETYLTDPVQVSV----TPENSTVDKIEQSLMHLSKQNKGLALQRI 340
Query: 350 IMAEKENKTIIFIETKRRVDDITR 373
I A + + I+F TK D + +
Sbjct: 341 ISANPKKRVIVFSRTKHGSDKLVK 364
>UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=7; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 685
Score = 188 bits (458), Expect = 2e-46
Identities = 105/324 (32%), Positives = 179/324 (55%), Gaps = 15/324 (4%)
Query: 67 PFKKDFYVPHLDVEKRPESDV-EAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDK 125
P + DFYV D+ ++ E R + ++G+++P+P ++ G PD V++ +++
Sbjct: 5 PIRTDFYVVPPDMTNLTAQEMRELLRELDGAKVRGQDVPRPIRSWHGTGLPDRVLEVLEE 64
Query: 126 MGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIAL 185
+ P +Q+ G P +SG D++ A TGSGKTL Y LP I H +QP+ +G+GPI L
Sbjct: 65 HEYKCPFAVQSLGVPALMSGRDLLLTAKTGSGKTLCYALPLIRHCADQPRCEKGEGPIGL 124
Query: 186 VLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDF 245
VL PT+ELA Q+ + D+ +++ +G R G E+++ATPGRLLD
Sbjct: 125 VLVPTQELAMQVFTLLDELGEAARLRCVASYGSTSLSDNIRHAKVGCELMVATPGRLLDL 184
Query: 246 L--ESGRT-NLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQS 302
L G+T +L R +++++DEADR+ D GF + ++ IRPDR T M SAT P+E++
Sbjct: 185 LTVNGGKTLSLSRVSFVIVDEADRLFDSGFMEHVEAFLKNIRPDRVTGMISATMPKELRG 244
Query: 303 LASEFLKDYLQINVGSLQLAANHNILQIIDVCME-YE----------KETKLSTLLKEIM 351
+ ++ L++ + I+VG A++ Q E Y+ + KL LL +
Sbjct: 245 VVAQHLRNPVVISVGGKPTPASNVEQQFFFFDEEVYDANNIKADMSPRLVKLVALLGDEG 304
Query: 352 AEKENKTIIFIETKRRVDDITRKM 375
+ +N ++F + K VD++ ++
Sbjct: 305 GDGQNLILVFTQRKEEVDELLGRL 328
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 187 bits (455), Expect = 5e-46
Identities = 102/275 (37%), Positives = 158/275 (57%), Gaps = 12/275 (4%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
+ FD+ G + ++ I MGF +P+ IQA+ P+AL GHD++G A TG+GKT ++
Sbjct: 4 IKFDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAF---GC 60
Query: 168 VHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARD 227
INN S + P AL+LAPTRELA Q+ E + K+ ++GG P Q R
Sbjct: 61 AIINNADFSGKKKSPKALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQPIDRQIRA 120
Query: 228 LDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 287
L GV+IV+ TPGR+LD + L +LVLDEAD ML+MGF + +I++ ++ DR
Sbjct: 121 LKNGVDIVVGTPGRVLDLIRRKSLPLNDIGFLVLDEADEMLNMGFIDDLEEIVKSLKTDR 180
Query: 288 QTLMWSATWPREVQSLASEFLKD---YLQINVGSLQLAANHNILQIIDVCMEYEKETKLS 344
QTL++SAT P +++ LA ++K+ ++ I SL + +I E + +
Sbjct: 181 QTLLFSATMPPQIKKLARNYMKEDTKHIAIKKSSL------TVSKIEQFYFEIKHRDRFE 234
Query: 345 TLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
TL + + ++ N IIF +TK+ VD++ KM+ G
Sbjct: 235 TLCRVLDFDEPNAAIIFCKTKKGVDEVVEKMQARG 269
>UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3;
Piroplasmida|Rep: DEAD-family helicase, putative -
Theileria annulata
Length = 757
Score = 187 bits (455), Expect = 5e-46
Identities = 122/348 (35%), Positives = 182/348 (52%), Gaps = 35/348 (10%)
Query: 62 LSRLKPFKKDFYVPHLDVEKRPESDVEAWR---SENEITLKGRNIPKPTLTFDEAGFPDY 118
L+ +K + D H +K E WR + EI +KG +P P T+ E+ P
Sbjct: 290 LNTIKYIESDMLSNHWTKKKLSEMTERDWRIFREDFEIYIKGGRVPPPIRTWAESPLPWE 349
Query: 119 VMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPK--- 175
+++ I K G+ KPTPIQ Q PIAL D++GIA TGSGKT +++LP + ++ P
Sbjct: 350 LLEAIKKAGYIKPTPIQMQAIPIALEMRDLIGIAVTGSGKTAAFVLPMLTYVKKLPPLDD 409
Query: 176 SSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIV 235
+ DGP AL+LAP+RELA QI + KF+ + + GG QA +L G EI+
Sbjct: 410 ETSLDGPYALILAPSRELALQIYDETVKFSAFCSCRSVAVVGGRNAESQAFELRKGCEII 469
Query: 236 IATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQI------------ 283
I TPGR+ D L+ T L +C Y++LDEADRM+DMGFE ++ I++ I
Sbjct: 470 IGTPGRVKDCLDRAYTVLSQCNYVILDEADRMIDMGFEDVLKYILDCIPSTNLKDRDESS 529
Query: 284 ------------RPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQII 331
R R T M+SAT P V+ L +L+ I++G + +I Q +
Sbjct: 530 ALEQELSTKAGHRRYRITHMFSATMPPAVEKLTKRYLRAPAFISIGDVG-GGKTSITQQL 588
Query: 332 DVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
D + +E+K + L+E + E IIF+ K+ D IT+ + + G
Sbjct: 589 D----FVQESKKTRHLEETLETLEPPIIIFVNLKKNTDVITKHITKIG 632
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 186 bits (453), Expect = 8e-46
Identities = 102/273 (37%), Positives = 155/273 (56%), Gaps = 7/273 (2%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
+TF + G ++ ++ G+ PTPIQAQ P L+G D++ A TG+GKT + LP +
Sbjct: 5 VTFAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLL 64
Query: 168 VHINNQPKSSRGDG--PI-ALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQ 224
+ +S P+ AL++APTRELA QI E K+ + +FGG PQ
Sbjct: 65 YRLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINIEPQ 124
Query: 225 ARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIR 284
L AGVEI++ATPGRLLD +E N + LVLDEADRMLDMGF P I++++ +
Sbjct: 125 IAALQAGVEILVATPGRLLDLVEQKAVNFSKTEILVLDEADRMLDMGFLPDIKRVMALLS 184
Query: 285 PDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLS 344
P RQ+LM+SAT+ E++ LA LK ++I ++Q N +I +I + ++K +
Sbjct: 185 PQRQSLMFSATFSGEIRKLADSLLKQPVRIE-AAVQNTVNESISHVIH---WVKPDSKFA 240
Query: 345 TLLKEIMAEKENKTIIFIETKRRVDDITRKMKR 377
LL I + + +IF++TK + + + R
Sbjct: 241 LLLHLIRQQNLKQALIFVKTKHGASHLAQMLSR 273
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 186 bits (453), Expect = 8e-46
Identities = 104/272 (38%), Positives = 154/272 (56%), Gaps = 6/272 (2%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
++F + G ++ + ++G+ +PTP+QA P L D++ +A TG+GKT S++LP I
Sbjct: 1 MSFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMI 60
Query: 168 VHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARD 227
+ + R P +L+L PTRELA Q+ E +K+ K+ + L GG P Q
Sbjct: 61 DILAHG--RCRARMPRSLILEPTRELAAQVAENFEKYGKYHKLSMSLLIGGVPMAEQQAA 118
Query: 228 LDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 287
L+ GV+++IATPGRLLD E G+ L C LV+DEADRMLDMGF P I I ++ R
Sbjct: 119 LEKGVDVLIATPGRLLDLFERGKILLSSCEMLVIDEADRMLDMGFIPDIETICTKLPTSR 178
Query: 288 QTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLL 347
QTL++SAT P ++ LA FL + QI + S AN I Q + K+ KL +L
Sbjct: 179 QTLLFSATMPPAIKKLADRFLSNPKQIEI-SRPATANTLIDQRLIEVSPRSKKKKLCDML 237
Query: 348 KEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
+ AEK++ IIF K V + +++ G
Sbjct: 238 R---AEKDHTAIIFCNRKTTVRQLATTLEQQG 266
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 186 bits (452), Expect = 1e-45
Identities = 113/276 (40%), Positives = 163/276 (59%), Gaps = 14/276 (5%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
+TF++ F ++D + MGF KPTPIQ + P+ +S D+V A TG+GKT +Y+LP I
Sbjct: 1 MTFNDFNFNSGLLDSLSSMGFNKPTPIQTEAIPVIMSNSDLVACAQTGTGKTAAYMLP-I 59
Query: 168 VHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGG---APKGPQ 224
+H + S D LVL PTRELA QI + + F+ + + ++GG A Q
Sbjct: 60 LH---KIIESNTDSLDTLVLVPTRELAIQIDQQIEGFSYFINVSSIAVYGGGDGATWDQQ 116
Query: 225 ARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIR 284
+ L G IVIATPGRLL L+SG NLK+ +LVLDEADRMLDMGF I ++I +
Sbjct: 117 RKALTDGANIVIATPGRLLAQLQSGTANLKQIKHLVLDEADRMLDMGFYDDIVRVISYLP 176
Query: 285 PDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLS 344
+RQT+M+SAT P ++++LA++ +KD QIN+ + A ILQ + YE++ +
Sbjct: 177 TERQTIMFSATMPTKMRALANKLMKDPQQINIAISKPA--EGILQ--QAYLVYEEQK--N 230
Query: 345 TLLKEIMAEKE-NKTIIFIETKRRVDDITRKMKRDG 379
L+K I++ N IIF TK V + R + G
Sbjct: 231 KLIKHILSSGNFNSIIIFSSTKEHVKKLERDLSNMG 266
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 185 bits (451), Expect = 1e-45
Identities = 110/306 (35%), Positives = 165/306 (53%), Gaps = 8/306 (2%)
Query: 73 YVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPT 132
YV + + +R ++D E EI L N T F G ++ ++ G +P
Sbjct: 56 YVRQVALARRFKADRECAVPLKEIELTKEN----TGGFAALGITGVLLKGVEAAGMTEPK 111
Query: 133 PIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLAPTRE 192
PIQ Q P L G D++GIA TGSGKT ++ LP + I R AL+LAPTRE
Sbjct: 112 PIQTQAIPSQLEGQDILGIAQTGSGKTAAFSLPILQKIIGLGDKRRPKTARALILAPTRE 171
Query: 193 LAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTN 252
LA QI++ + ++ I + GG K Q + + G++++IATPGRL D + G +
Sbjct: 172 LAVQIEQTIRNVSKSAHISTALVLGGVSKLSQIKRIAPGIDVLIATPGRLTDLMRDGLVD 231
Query: 253 LKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDYL 312
L + +LVLDEADRMLDMGF +++I + +RQT ++SAT P+E+ SLA L+D +
Sbjct: 232 LSQTRWLVLDEADRMLDMGFINDVKRIAKATHAERQTALFSATMPKEIASLAERLLRDPV 291
Query: 313 QINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDIT 372
++ V Q A I Q++ EK LS +L + A+ + I+F TK D +
Sbjct: 292 RVEVAP-QGATASEITQVVHPVPTKEKRRLLSAMLTD--ADMRS-VIVFTRTKHGADAVV 347
Query: 373 RKMKRD 378
R ++RD
Sbjct: 348 RHLERD 353
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 185 bits (450), Expect = 2e-45
Identities = 102/271 (37%), Positives = 151/271 (55%), Gaps = 6/271 (2%)
Query: 110 FDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVH 169
F + G ++ + G+ PTPIQAQ P+ +SG D++GIA TG+GKT ++ LP +
Sbjct: 67 FTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTAAFALPILHR 126
Query: 170 INNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLD 229
+ K + G LVL+PTRELA QI E + + +FGG GPQ + L
Sbjct: 127 LAEDKKPAPRRGFRCLVLSPTRELATQIAESFRDYGKHMGLTVATIFGGVKYGPQMKALA 186
Query: 230 AGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQT 289
AGV++V+ATPGRL+D L +L VLDEAD+MLD+GF IRKI Q+ +RQ
Sbjct: 187 AGVDVVVATPGRLMDHLGEKSAHLNGVEIFVLDEADQMLDLGFVVPIRKIASQLPKERQN 246
Query: 290 LMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKE 349
L +SAT P E+ LA E LK N + + + ++ ID + + + + LL E
Sbjct: 247 LFFSATMPSEIGKLAGELLK-----NPAQVAITPSATTVERIDQSLIFIEAQRKRPLLAE 301
Query: 350 IMAEKE-NKTIIFIETKRRVDDITRKMKRDG 379
++A+K ++I+F TKR D + + + G
Sbjct: 302 LLADKSVERSIVFTRTKRGADRVAKYLVASG 332
>UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: DEAD/DEAH box
helicase-like protein - Lentisphaera araneosa HTCC2155
Length = 412
Score = 185 bits (450), Expect = 2e-45
Identities = 95/274 (34%), Positives = 160/274 (58%), Gaps = 6/274 (2%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
++F++ FPDY+ +D + F++ T IQA+ P+ G D++ + TG+GKTL++ P I
Sbjct: 1 MSFEQLNFPDYLSRAVDNLNFSEATDIQAKAIPLIQEGKDLLAESQTGTGKTLAFSFPLI 60
Query: 168 VHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTS--KIHNTCLFGGAPKGPQA 225
IN P + + LVL PTRELA Q+++ +A S I L GG Q
Sbjct: 61 ERINTLPPKKKKISILGLVLVPTRELALQVEKAFTNYAEFSLRPIKTATLIGGENIDGQI 120
Query: 226 RDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP 285
R L G++++IATPGR+++ + G L L+LDEAD+MLD+GF ++++++E +
Sbjct: 121 RKLRMGLDVLIATPGRIIELINLGEVRLVELEMLILDEADKMLDLGFADELKELLEALPK 180
Query: 286 DRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLST 345
RQ L++SAT P++VQ LA EFL +++ + Q+ ++ ++I+V ++ L
Sbjct: 181 KRQNLLFSATLPQKVQQLAEEFLNAAVELRISRDQITGDNIEQRVIEVDANLRRQV-LQK 239
Query: 346 LLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
L K+ E+ TIIF+ +KR ++ K+K+ G
Sbjct: 240 LFKD---EQWKHTIIFVSSKRSAFNLANKLKKAG 270
>UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_146,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 566
Score = 184 bits (448), Expect = 3e-45
Identities = 120/327 (36%), Positives = 177/327 (54%), Gaps = 26/327 (7%)
Query: 57 KPKW--DLSRLKPFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAG 114
K KW D+ R +P KK ++K + + I ++G + P P +F +
Sbjct: 72 KQKWCIDIFRWRPKKKQRLWDQYKIDKILK--------KYSIMIEGNDPPPPIKSFQDLR 123
Query: 115 FPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVH-INNQ 173
++ + KM KPTPIQ QG P L G D++G+A +G GKTL ++LPA++ I +
Sbjct: 124 VDHRILKILSKMKIKKPTPIQMQGLPAVLMGRDIIGVAPSGQGKTLVFLLPALLQCIEEE 183
Query: 174 PKSS--RGDGPIALVLAPTRELA----QQIQEVCDKFANTS--KIHNTCLFGGAPKGPQA 225
K RG+GP AL+L P+ ELA + ++ C KF IH GG Q
Sbjct: 184 MKMPVIRGEGPFALILLPSHELAILTYELAKQYCQKFQKKGFPAIHCLLGIGGMDMSSQL 243
Query: 226 RDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP 285
+ + GV IVI TPGR+ D + + N+ C ++VLDEADRMLD FE +IR I+E
Sbjct: 244 QSIRNGVHIVIGTPGRISDMVNKKKINMDLCRFIVLDEADRMLDQVFELEIRNILEHFTG 303
Query: 286 DRQTLMWSATWPREVQSLASEFLKDYLQINVG-SLQLAANHNILQIIDVCMEYEKETKLS 344
RQT+++SAT P+++Q + L D L INVG S Q+ N N++Q I + ++E KL
Sbjct: 304 PRQTMLFSATLPKKIQEFTKQTLVDPLVINVGRSGQI--NLNVIQEI---LYVKQEEKLH 358
Query: 345 TLLKEIMAEKENKTIIFIETKRRVDDI 371
LL + + + +IF E + VDDI
Sbjct: 359 YLL-DCLKKTTPPVVIFSEHQNDVDDI 384
>UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 749
Score = 184 bits (447), Expect = 4e-45
Identities = 106/289 (36%), Positives = 157/289 (54%), Gaps = 23/289 (7%)
Query: 110 FDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVH 169
FDE G D ++ I+ +G+ PTP+QA P+ L G D++ A TG+GKT +++LP + +
Sbjct: 48 FDELGLSDEMLRAIENLGYTAPTPVQAGSIPVVLEGRDLLAAAQTGTGKTAAFLLPTMNN 107
Query: 170 INN--QPKSSR-----------------GDGPIALVLAPTRELAQQIQEVCDKFANTSKI 210
+ + PK R G GP+ LV+ PTRELAQQI EV K A+ +
Sbjct: 108 LEHIAPPKPVRERGGRNRRRGAKKPEGNGRGPVMLVITPTRELAQQIDEVAGKIADVTGH 167
Query: 211 HNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDM 270
+ GG PQ L G +I++ATPGRL+D +E G +L LVLDEADRMLDM
Sbjct: 168 VAVTVVGGVSYKPQTAALKYGCDILVATPGRLVDLIEQGACHLDEVKVLVLDEADRMLDM 227
Query: 271 GFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQI 330
GF P +R+I+ + +RQTL++SAT E ++ + D ++ + A+ +
Sbjct: 228 GFLPAVRRIVRETPAERQTLLFSATLDEEAVGEITDLVSDPARVEIAPATSTADTVDQFV 287
Query: 331 IDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
V +E K L LK+ E +TI+F+ TK R D R+++R G
Sbjct: 288 FPVSIE-AKNNLLPEFLKK---EGPERTIVFMRTKHRADSCCRRLERKG 332
>UniRef50_Q240I5 Cluster: DEAD/DEAH box helicase family protein;
n=2; Oligohymenophorea|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 749
Score = 184 bits (447), Expect = 4e-45
Identities = 106/326 (32%), Positives = 181/326 (55%), Gaps = 31/326 (9%)
Query: 80 EKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGW 139
++ E D +R +N+I +KG +PKP T++E P Y++D + + + KPTPIQ Q
Sbjct: 295 DEMTERDWRIFREDNDIIIKGGRVPKPMRTWEEGELPPYILDAVRRSKYEKPTPIQMQTI 354
Query: 140 PIALSGHDMVGIASTGSGKTLSYILPAIVHINNQP---KSSRGDGPIALVLAPTRELAQQ 196
PI L D++GI+ TG+GKT ++++P I ++ + P + DGP AL+L PTRELA Q
Sbjct: 355 PIGLQRKDLIGISQTGTGKTCAFLIPLITYLRSLPPMDEEIAKDGPYALILIPTRELAPQ 414
Query: 197 IQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRC 256
I++ + ++ + + GG +G QA L G E++I T GR+ D LE L +
Sbjct: 415 IEKEFQNLTSNMRMKSLVMVGGKDEGNQAFKLKLGCELLIGTVGRIKDALEKNYLVLDQV 474
Query: 257 TYLVLDEADRMLDMGFEPQIRKIIEQIRPD-----------------------RQTLMWS 293
+++VLDEAD+M+D+ FE + I+++IR + R T ++S
Sbjct: 475 SWVVLDEADKMIDLNFEQDVNFILDKIRTNMKSEDENMAVLQEQEAKVGEKIFRVTHLFS 534
Query: 294 ATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAE 353
AT P ++ LA ++L+ + I++G A +I QI+D E +K+++ L++I+
Sbjct: 535 ATMPPNLERLAKKYLRSFCYISIGEAG-DAKKDIEQIVDFMSEGQKKSR----LQKILET 589
Query: 354 KENKTIIFIETKRRVDDITRKMKRDG 379
+ IIF K V+ +++ + R G
Sbjct: 590 AKPPIIIFANEKTAVEKLSKILDRWG 615
>UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase prp28; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase prp28 -
Schizosaccharomyces pombe (Fission yeast)
Length = 662
Score = 183 bits (446), Expect = 6e-45
Identities = 109/323 (33%), Positives = 173/323 (53%), Gaps = 24/323 (7%)
Query: 79 VEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQG 138
+E D + + I++KG ++P P ++EAG P ++ + K+ + +P+ IQ
Sbjct: 220 LEAMKPRDWRILKEDYNISIKGDDLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAA 279
Query: 139 WPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGD---GPIALVLAPTRELAQ 195
P+ L D++GIA TGSGKT ++I+P I+ I+ P + + GP A+VLAPTRELAQ
Sbjct: 280 IPVLLQRKDLIGIAETGSGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQ 339
Query: 196 QIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKR 255
QIQ +KFA + GG Q+ + G IV+ATPGRLLD LE L +
Sbjct: 340 QIQVEGNKFAEPLGFRCVSVVGGHAFEEQSFQMSQGAHIVVATPGRLLDCLERRLFVLSQ 399
Query: 256 CTYLVLDEADRMLDMGFEPQIRKIIEQIRPD-------------------RQTLMWSATW 296
CTY+V+DEADRMLDMGFE + KI+ + RQT+M+SAT
Sbjct: 400 CTYVVMDEADRMLDMGFEDDVNKILSSLPSSNASEKDGSILATANSSSSRRQTIMFSATL 459
Query: 297 PREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKEN 356
P V +LA +L + + + +G++ A + ++ + + +K ++ +L+
Sbjct: 460 PPRVANLAKSYLIEPVMLTIGNIGQAVDRVEQRVEMISDDSKKWRRVEEILES--NRFSP 517
Query: 357 KTIIFIETKRRVDDITRKMKRDG 379
IIF+ KR ++ I +++ G
Sbjct: 518 PIIIFVNLKRNIEAIAKQLNAIG 540
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 183 bits (445), Expect = 8e-45
Identities = 103/271 (38%), Positives = 153/271 (56%), Gaps = 7/271 (2%)
Query: 110 FDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVH 169
F G ++ + G+ PTPIQA P AL+GHD++ A TG+GKT +++LP++
Sbjct: 31 FSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLPSLER 90
Query: 170 INNQPKSSRGDG--PIA-LVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQAR 226
+ +S P+ LVL PTRELA QI + + + +T LFGG Q
Sbjct: 91 LKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSYIKNLPLRHTVLFGGMNMDKQTA 150
Query: 227 DLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD 286
DL AG EIV+AT GRLLD ++ +L + +VLDEADRMLDMGF IRKI++ +
Sbjct: 151 DLRAGCEIVVATVGRLLDHVKQKNISLNKVEIVVLDEADRMLDMGFIDDIRKIMQMLPKQ 210
Query: 287 RQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTL 346
RQTL++SAT+ ++ LA +F+ + V + Q N N+ Q I +K L L
Sbjct: 211 RQTLLFSATFSAPIRKLAQDFMNAPETVEVAA-QNTTNANVEQHIIAVDTIQKRNLLERL 269
Query: 347 LKEIMAEKENKTIIFIETKRRVDDITRKMKR 377
+ ++ N+ I+F +TK+ VD +TR++ R
Sbjct: 270 IVDL---HMNQVIVFCKTKQSVDRVTRELVR 297
>UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr3 scaffold_8, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 971
Score = 182 bits (443), Expect = 1e-44
Identities = 85/197 (43%), Positives = 125/197 (63%), Gaps = 3/197 (1%)
Query: 66 KPFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDK 125
KPF+K+FY+ + + ++ A+R + E+ + G+++PKP T+ + G ++D I K
Sbjct: 442 KPFRKNFYIEVKESARMTPEEIAAYRKQLELKIHGKDVPKPVKTWHQTGLTTKILDTIKK 501
Query: 126 MGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIAL 185
+ + +P PIQAQ PI +SG D +GIA TGSGKTL+++LP + HI +QP GDGPI L
Sbjct: 502 LNYERPMPIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPVMPGDGPIGL 561
Query: 186 VLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDF 245
++APTREL QQI KFA I ++GG+ Q +L G E+V+ TPGR++D
Sbjct: 562 IMAPTRELVQQIHSDIKKFAKVVGISCVPVYGGSGVAQQISELKRGAEVVVCTPGRMIDI 621
Query: 246 L--ESGR-TNLKRCTYL 259
L G+ TNL+R TYL
Sbjct: 622 LCTSGGKITNLRRVTYL 638
>UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 865
Score = 182 bits (443), Expect = 1e-44
Identities = 107/305 (35%), Positives = 171/305 (56%), Gaps = 11/305 (3%)
Query: 71 DFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAK 130
DF ++ V + + E ++ I + G + P F+ + + + + +
Sbjct: 450 DFQRLNMSVGLVSDQEFEDFKIRENIKIIG-DCPHRLFQFNPQMMLPELFQNVREQNWTE 508
Query: 131 PTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLAPT 190
PTPIQ PI +SG ++VGIA TGSGKT +Y++PAI ++ NQ K GP L++A T
Sbjct: 509 PTPIQKIAIPIVMSGMNLVGIAQTGSGKTAAYLIPAITYVINQNKKR---GPHVLIMANT 565
Query: 191 RELAQQIQEVCDKFANTSKIHNTCLFGGAP-KGPQARDLDAGVEIVIATPGRLLDFLESG 249
REL +QIQE + + + +GG + Q RD+ AG +I+ A PGRLLDF+ +
Sbjct: 566 RELVKQIQEFGEILTKNTSVKVAVAYGGENNRRQQIRDI-AGADIIAAAPGRLLDFIRNN 624
Query: 250 RTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLK 309
+ +V+DEAD+M+ FEPQ + +I + + QTLM+SATWP EVQ +A +L
Sbjct: 625 NIKPESIGIVVIDEADKMVSNDFEPQCKAVISRCPKNIQTLMFSATWPDEVQFMAQNYLG 684
Query: 310 DYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKEN----KTIIFIETK 365
+Y+++ V S +L N NI Q++ + + + +L +++ I K N K IIF +TK
Sbjct: 685 EYIRVIVNSRELTININIKQMV-IEKDRDSLRQLGEIVEGIKRSKGNESYPKIIIFCKTK 743
Query: 366 RRVDD 370
R V++
Sbjct: 744 RTVEE 748
>UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_36,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 813
Score = 182 bits (443), Expect = 1e-44
Identities = 120/299 (40%), Positives = 169/299 (56%), Gaps = 29/299 (9%)
Query: 64 RLKPFKKDFYVPHLD-VEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDE 122
RLK ++ H++ + ++++ + + N+I NI K F A + ++ +
Sbjct: 392 RLKEDEQSEITKHINLIPPATSNEIQEFINSNKIEGNISNIAKD-FEFLPAEYQQILISK 450
Query: 123 IDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGP 182
PTPIQ +P+ L G D++ IA TGSGKTL+Y LP I+H QPK GP
Sbjct: 451 ----KITTPTPIQKAIFPLILEGRDVIAIAETGSGKTLAYALPGIIHSQAQPKVL---GP 503
Query: 183 IALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVE--------- 233
LVLAPTRELAQQIQ + F T C++GG K Q ++ G++
Sbjct: 504 RILVLAPTRELAQQIQSQYELFTRTC-----CVYGGVFKNLQYSEI-LGIKESRNKINLP 557
Query: 234 -IVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMW 292
++I+TPGRLLDF++ G L T +VLDEADRMLDMGFE QI +I+ +R DRQTL +
Sbjct: 558 SVIISTPGRLLDFMKDGLP-LNSITQVVLDEADRMLDMGFEDQITQILSAVRDDRQTLFF 616
Query: 293 SATWPREVQSLASEFL-KDYLQINVGSLQLAANHNILQIIDVCME--YEKETKLSTLLK 348
SATWP EVQ LA+ +D + I +G L+ N NI Q + + E +EK +L+ LK
Sbjct: 617 SATWPNEVQRLANSLCNQDPIMIQLGEQGLSVNKNIQQEVIIVYENKFEKFAELTDRLK 675
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 180 bits (439), Expect = 4e-44
Identities = 105/268 (39%), Positives = 151/268 (56%), Gaps = 6/268 (2%)
Query: 110 FDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVH 169
F + G + +M I+++G+ PTPIQAQ P L GHD++G+A TG+GKT S+ LP +
Sbjct: 293 FADLGLSEPIMRAIEELGYEHPTPIQAQAIPEVLKGHDVLGVAQTGTGKTASFTLPMLQK 352
Query: 170 INNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLD 229
+ +R P +L+L PTRELA Q+ E + ++ + L GG Q L+
Sbjct: 353 LAGS--RARARMPRSLILEPTRELALQVAENFKLYGKYLRLTHALLIGGESMAEQRDVLN 410
Query: 230 AGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQT 289
GV+++IATPGRLLD G L + + LV+DEADRMLDMGF P I KI+ + RQT
Sbjct: 411 RGVDVLIATPGRLLDLFGRGGLLLTQTSTLVIDEADRMLDMGFIPDIEKIVALLPAHRQT 470
Query: 290 LMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKE 349
L +SAT E++ LA FL+ ++I V S Q + I + + + E EK L LL+
Sbjct: 471 LFFSATMAPEIRRLADAFLRHPVEITV-SRQSSVATTIEEALVIVPEDEKRRTLKKLLRR 529
Query: 350 IMAEKENKTIIFIETKRRVDDITRKMKR 377
E I+F KR VD I + + +
Sbjct: 530 ---ENVQSAIVFCNRKRDVDMIQQYLTK 554
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 180 bits (439), Expect = 4e-44
Identities = 92/276 (33%), Positives = 150/276 (54%), Gaps = 4/276 (1%)
Query: 104 PKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYI 163
P F + ++ +D+ G+ KPTPIQAQ P+ L G D++G+A TG+GKT S+
Sbjct: 3 PTSAQAFADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTASFA 62
Query: 164 LPAIVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGP 223
LP + + P+ + +G LVLAPTREL QI + + F+ + T +FGG +
Sbjct: 63 LPLLHRLAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRHQPVRVTTIFGGVSQVH 122
Query: 224 QARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQI 283
Q + L+ GV+I++A PGRLLD +E G +L + LVLDEAD+MLDMGF I +I+ +
Sbjct: 123 QVKALEEGVDIIVAAPGRLLDLIEQGLCDLSQLETLVLDEADQMLDMGFAKPIERIVATL 182
Query: 284 RPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKL 343
DR T+++SAT P+ + +L L++ ++ + + + +I M K
Sbjct: 183 PEDRHTVLFSATMPKSIAALVESLLRNPAKVEIA----PPSSTVDRIAQSVMFLNASDKK 238
Query: 344 STLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
+ LL ++ + ++F K +D+ + G
Sbjct: 239 AALLAQLRTPGIGQAVVFTLQKNIANDVCTFLTESG 274
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 180 bits (439), Expect = 4e-44
Identities = 97/274 (35%), Positives = 157/274 (57%), Gaps = 7/274 (2%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
++F G D+ + +G+ +PT IQ + P L GHD++ A TGSGKT ++LP +
Sbjct: 1 MSFVSLGLSDFFTSTLSSLGYKEPTAIQDKAIPAVLKGHDLIAAAETGSGKTAGFVLPLL 60
Query: 168 VHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTS--KIHNTCLFGGAPKGPQA 225
+++ P + ALVL PTRELA Q+ + D+++ KI + ++GGA PQ
Sbjct: 61 EKLHSIPAPGN-NLTHALVLVPTRELAVQVSQSVDRYSENCPRKIRSVAIYGGAAINPQM 119
Query: 226 RDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP 285
+ L G +IV+ATPGRLLD + +L+ LVLDEADRMLD+GF ++ I++Q
Sbjct: 120 QSLSKGCDIVVATPGRLLDLMRKNALDLRGLKALVLDEADRMLDLGFADELDDILDQTPG 179
Query: 286 DRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLST 345
+ QTL++SAT+P +V+ L E L++ ++I+V + Q+ +E ++ +
Sbjct: 180 NVQTLLFSATFPDKVKELTEELLRNPVEISVKQEATLPD----QLHQRAIEVDRNNRTML 235
Query: 346 LLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
L I EK + +IF+ +KR ++I K+ R G
Sbjct: 236 LKHLIKQEKWQQLLIFVGSKRTANNIELKLYRSG 269
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 180 bits (439), Expect = 4e-44
Identities = 104/270 (38%), Positives = 153/270 (56%), Gaps = 6/270 (2%)
Query: 110 FDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVH 169
F + G + V I +MG+ PTPIQAQ P+ L G D++G A TG+GKT S+ LP +
Sbjct: 225 FADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTASFTLPMMDI 284
Query: 170 INNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLD 229
+++ + +R P +L+L PTRELA Q+ E K+ K+++ L GG Q L
Sbjct: 285 LSD--RRARARMPRSLILEPTRELALQVAENFVKYGQYLKLNHALLIGGESMNDQRDVLS 342
Query: 230 AGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQT 289
GV+++IATPGRL+D + G L LV+DEADRMLDMGF P + +I+ + +RQT
Sbjct: 343 KGVDVLIATPGRLIDLFDRGGLLLTDTRILVIDEADRMLDMGFIPDVERIVSLLPHNRQT 402
Query: 290 LMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKE 349
L +SAT E++ LA FL++ +I V A I + + E +K L LL++
Sbjct: 403 LFFSATMAPEIRRLADAFLQNPKEITVAKPASVAT-TITSGLALVGEMDKRKALRHLLRQ 461
Query: 350 IMAEKENKTIIFIETKRRVDDITRKMKRDG 379
EK +IF KR VD +T+ + + G
Sbjct: 462 ---EKVQNALIFCNRKRDVDILTKSLVKHG 488
>UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Yarrowia lipolytica (Candida lipolytica)
Length = 575
Score = 180 bits (438), Expect = 6e-44
Identities = 111/321 (34%), Positives = 178/321 (55%), Gaps = 31/321 (9%)
Query: 79 VEKRPESDVEAWRSENEITLKGR-NIPKPTLTFDEAG-FPDYVMDEIDKMGFAKPTPIQA 136
VE D ++ + I KG NIP P +++E P V D I +MG+ +PTPIQ
Sbjct: 132 VESMTSRDWRIFKEDYSIVTKGGGNIPNPLRSWNECKEIPGIVRDTISRMGYKEPTPIQR 191
Query: 137 QGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPK---SSRGDGPIALVLAPTREL 193
PIAL D++G+A TGSGKT S+++P I +I PK S+ +GP L+LAPTREL
Sbjct: 192 AAIPIALGIRDVIGVAETGSGKTASFLIPLISYICELPKLDERSKVNGPYGLILAPTREL 251
Query: 194 AQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNL 253
A QI++ KF + GG QA + G E+++ATPGRLLD ++ L
Sbjct: 252 AMQIKDEAVKFCAPLGFKVVSVVGGYSAQEQALAVQEGAELIVATPGRLLDVIDRRLLVL 311
Query: 254 KRCTYLVLDEADRMLDMGFEPQIRKIIEQI-----RPD---------------RQTLMWS 293
+C Y+V+DEADRM+DMGFE Q++K++ + +PD RQT+M++
Sbjct: 312 NQCCYVVMDEADRMVDMGFEEQVQKVLASLPSSNAKPDSDEAENLAAVSTRRYRQTMMYT 371
Query: 294 ATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAE 353
AT P ++ LA ++L+ + +GS A + + Q+++ EK + L +I+++
Sbjct: 372 ATMPVAIEKLAKKYLRRPGIVTIGSAGQAGS-TVTQLVEFLNTDEKRKR---RLLDIISK 427
Query: 354 KENK--TIIFIETKRRVDDIT 372
++ + ++F+ KR + ++
Sbjct: 428 RQYRPPIVVFLNYKRDCEAVS 448
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 180 bits (437), Expect = 7e-44
Identities = 99/271 (36%), Positives = 149/271 (54%), Gaps = 4/271 (1%)
Query: 109 TFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIV 168
TF E V + + + PTPIQAQ P AL G D++G A TG+GKT + LP +
Sbjct: 3 TFQELKLIAPVQKALVEENYKIPTPIQAQTIPAALEGRDVLGCAQTGTGKTAALALPILN 62
Query: 169 HINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDL 228
+ + S P+ALVLAPTRELA QI + D + K+ + ++GG +G Q + L
Sbjct: 63 QLGKNSRKSIPHHPLALVLAPTRELAIQIGDSFDAYGRHLKLRSVLIYGGVGQGNQVKAL 122
Query: 229 DAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 288
G I++ATPGRLLD + G L + VLDEADRMLDMGF P +++II Q+ RQ
Sbjct: 123 KRGAHILVATPGRLLDLMNQGHIKLNQLEVFVLDEADRMLDMGFLPDLKRIITQLPTQRQ 182
Query: 289 TLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLK 348
+L +SAT ++ LA L + +NV ++ +I M E+ K L K
Sbjct: 183 SLFFSATLAPKITELAHSLLSKPVTVNV----TPKTTSVEKIQQQLMFVERNFKQPLLQK 238
Query: 349 EIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
+ ++ + ++F +TKR + +++++ R G
Sbjct: 239 ILGGDEVERALVFTKTKRTANTLSQRLVRSG 269
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 179 bits (436), Expect = 1e-43
Identities = 102/270 (37%), Positives = 150/270 (55%), Gaps = 10/270 (3%)
Query: 110 FDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVH 169
F G ++ ID+ GF KPTPIQ + PIA++G D++G A TG+GKT S+ +P +
Sbjct: 6 FYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPILNR 65
Query: 170 INNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLD 229
+ +G+G ALVL PTRELA Q+ E + +I ++GG Q R L
Sbjct: 66 V------IKGEGLQALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIELQLRSLR 119
Query: 230 AGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQT 289
EI++ TPGRL+D + G +L Y+VLDEAD MLDMGF P I+KI+ Q +RQT
Sbjct: 120 RNPEIIVGTPGRLMDHMNRGTISLSPLKYVVLDEADEMLDMGFLPDIQKILSQCPRERQT 179
Query: 290 LMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKE 349
++SAT P EV+ L ++F+K I + S + +I + K+ TL +
Sbjct: 180 FLFSATLPDEVRELGTKFMKQPEIILIES----PERTVPEIEQYYYQVNSRRKIETLCRI 235
Query: 350 IMAEKENKTIIFIETKRRVDDITRKMKRDG 379
I A++ ++IF TKR D++ R + G
Sbjct: 236 IDAQQPPISLIFCRTKRNADELARVLTSRG 265
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 179 bits (435), Expect = 1e-43
Identities = 92/273 (33%), Positives = 159/273 (58%), Gaps = 7/273 (2%)
Query: 107 TLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPA 166
++ F + G +++ ++ M PTP+Q + P L G D++ A TG+GKT ++ LP
Sbjct: 6 SVNFADLGIEQQLVETLNNMNIVTPTPVQEKSIPHVLEGKDLLAAAQTGTGKTAAFGLPI 65
Query: 167 IVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQAR 226
I + Q K G P AL+L PTRELAQQ+ + ++A + + C++GG G Q
Sbjct: 66 IQAV--QQKKRNGT-PHALILVPTRELAQQVFDNLTQYAEHTDLRIVCVYGGTSIGVQKN 122
Query: 227 DLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD 286
L+ G +I+IATPGRLLD L +G N+ + LVLDEADRMLDMGF P +++I+ ++ D
Sbjct: 123 KLEEGADILIATPGRLLDHLFNGNVNISKTGVLVLDEADRMLDMGFWPDLQRILRRLPND 182
Query: 287 RQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTL 346
+Q +++SAT+ + ++++A + + +++ V AN + + +K+ K L
Sbjct: 183 KQIMLFSATFEKRIKTIAYKLMDSPVEVEVS----PANTTAETVKQMVYPVDKKRKRELL 238
Query: 347 LKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
I + + ++F +TK+ D++ +++K DG
Sbjct: 239 AYLIGSRNWQQVLVFTKTKQGSDELAKELKLDG 271
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 178 bits (434), Expect = 2e-43
Identities = 100/270 (37%), Positives = 153/270 (56%), Gaps = 8/270 (2%)
Query: 110 FDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVH 169
F E + + K F +PTPIQ+ AL+G D+V A TG+GKTL+++LP I
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQL 63
Query: 170 INNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLD 229
++ +P R G AL+L PTRELA QI E + A + I GG + Q RD+
Sbjct: 64 LSTEP---RQPGVRALILTPTRELALQINEALLQIARGTGIRAAVAVGGLNERSQLRDIR 120
Query: 230 AGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQT 289
G IV+ATPGRL DF+ G NL L+LDE+DRMLDMGF P I++II + +RQT
Sbjct: 121 GGANIVVATPGRLYDFMSRGLINLTTVRMLILDESDRMLDMGFLPTIKRIIAAMPAERQT 180
Query: 290 LMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKE 349
L++SAT V+ L +++ ++I +GS+ + L + +V +++ K LL+
Sbjct: 181 LLFSATLESSVKQLVETHVRNAVRIELGSISKPSEQVDLHLYEV----DQDRKFG-LLEM 235
Query: 350 IMAEKENKTIIFIETKRRVDDITRKMKRDG 379
++ E++ ++F TK D + +K+ + G
Sbjct: 236 MLREEQGSFLVFARTKHGADKLAKKLAQSG 265
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 177 bits (432), Expect = 3e-43
Identities = 104/278 (37%), Positives = 164/278 (58%), Gaps = 12/278 (4%)
Query: 108 LTF-DEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPA 166
+TF D A PD + ID G+ +PTPIQA+ P+ ++G D++G A TG+GKT + LP
Sbjct: 20 VTFADFALHPD-IQKAIDAQGYTQPTPIQAKAIPVVMTGVDVMGAAQTGTGKTAGFSLPI 78
Query: 167 IVHINNQPKSSRGDGPI-----ALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPK 221
+ + P ++ P AL+L PTRELA Q+ +A + + +T ++GG
Sbjct: 79 LNRL--MPLATENTSPARHPVRALILTPTRELADQVAANVHTYAKFTPLRSTVVYGGVDI 136
Query: 222 GPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIE 281
PQ + L GVE+VIATPGRLLD ++ NL + LVLDEADRMLDMGF P +++II
Sbjct: 137 NPQIQTLRRGVELVIATPGRLLDHVQQKSINLGQVQVLVLDEADRMLDMGFLPDLQRIIN 196
Query: 282 QIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKET 341
+ RQ L++SAT+ E+Q LA F+ I V + + A + NI Q+I ++ E++
Sbjct: 197 LLPKTRQNLLFSATFSPEIQKLAKSFMVSPTLIEV-ARRNATSENIKQVI-FALDSEEDK 254
Query: 342 KLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
+++ + I ++ ++ I+F TK + R ++++G
Sbjct: 255 RMA-VCHLIQSKALSQVIVFSNTKLGTARLARHLEKEG 291
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 177 bits (431), Expect = 4e-43
Identities = 93/257 (36%), Positives = 143/257 (55%), Gaps = 4/257 (1%)
Query: 123 IDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGP 182
+ + G+ PTPIQ P+ L GHD++GIA TG+GKT ++ LP + +++ + P
Sbjct: 19 LKEAGYETPTPIQLAAIPVILEGHDLLGIAQTGTGKTAAFSLPILQNLSKHTRKIEPKSP 78
Query: 183 IALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRL 242
L+L PTRELA QI E + ++ + + +FGG + PQ R L GV+I+IATPGRL
Sbjct: 79 RCLILTPTRELAIQIHENIEAYSKHLNMKHAVIFGGVGQNPQVRALQGGVDILIATPGRL 138
Query: 243 LDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQS 302
+D L R VLDEADRMLDMGF I+KI+ + R L +SAT P E+Q+
Sbjct: 139 MDLHGQKHLKLDRVEIFVLDEADRMLDMGFMQDIKKILPLLPQKRHNLFFSATMPHEIQT 198
Query: 303 LASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFI 362
LA+ L + ++ V + A ++ M +K KL LL + E +K ++F+
Sbjct: 199 LANRILVNPKKVEVTPVSSTAE----KVEQRVMFVDKPQKLDLLLHILKDESLSKVLVFV 254
Query: 363 ETKRRVDDITRKMKRDG 379
+ K + + ++ + G
Sbjct: 255 QMKYGANRVVDRLTKAG 271
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 177 bits (431), Expect = 4e-43
Identities = 101/271 (37%), Positives = 150/271 (55%), Gaps = 8/271 (2%)
Query: 110 FDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVH 169
F + G ++D + K+G+ PTPIQ P LSG D++G A TG+GKT ++ LP I
Sbjct: 9 FSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLI-- 66
Query: 170 INNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFA-NTSKIHNTCLFGGAPKGPQARDL 228
NN +SR P LVLAPTRELA Q+ E + FA N + C++GG G Q R L
Sbjct: 67 -NNMDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGGQEYGSQIRAL 125
Query: 229 DAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 288
GV++V+ T GR++D +E G L LVLDEAD ML MGF ++ ++ + + Q
Sbjct: 126 KQGVKVVVGTTGRVMDHIEKGTLQLDNLRALVLDEADEMLRMGFIDDVKFVLSHVSDECQ 185
Query: 289 TLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLK 348
L++SAT P ++ + E+L++ +I V + AN + Q V + K L LL+
Sbjct: 186 RLLFSATIPTDIADIIEEYLRNPCKIQVKAKTKTAN-TVTQKFIVIKGFRKIDALDRLLE 244
Query: 349 EIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
E+ + IIF++TK ++T +K G
Sbjct: 245 ---TEETDGVIIFVKTKTSTIEVTDNLKALG 272
>UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 620
Score = 177 bits (431), Expect = 4e-43
Identities = 102/311 (32%), Positives = 166/311 (53%), Gaps = 8/311 (2%)
Query: 73 YVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPT 132
Y H + V+ R + EI +KG ++ P L F F + + + G+ PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 133 PIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINN-----QPKSSRGDGPIALVL 187
PIQ Q P+ LSG D++ ASTGSGKT S++LP I I++ P S L+L
Sbjct: 221 PIQMQVLPVLLSGRDVMVCASTGSGKTASFLLPMISRIHHITGKLLPSSPEVRFIYGLIL 280
Query: 188 APTRELAQQIQEVCDKFAN-TSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFL 246
APTREL QI++ +F + + + L GG P PQ L GV++++ATPGR+++ +
Sbjct: 281 APTRELCMQIEKQTKEFVHGMTNMRTALLIGGVPVPPQLHRLKMGVQVIVATPGRMVEII 340
Query: 247 ESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASE 306
+L V+DE D ML +GFE Q+++I+E++ RQT+++SAT P ++++AS
Sbjct: 341 SRQAVDLTHVIGCVVDEVDTMLQLGFEQQVQQILERLSNRRQTMLFSATIPPSIEAMASR 400
Query: 307 FLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKR 366
L + I+ GS L + Q+I E K+ +L ++LK+ ++F+E+K
Sbjct: 401 LLNAPVFISAGSPSLPTK-AVKQLILWVEEKSKKKQLFSILKD-SRHFNPPAVVFVESKL 458
Query: 367 RVDDITRKMKR 377
D + + +
Sbjct: 459 GADMLAEAVSK 469
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 177 bits (430), Expect = 5e-43
Identities = 100/272 (36%), Positives = 150/272 (55%), Gaps = 9/272 (3%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
LTF + + V+ +D MGF +P+PIQAQ P L G D++G A TG+GKT ++ +P +
Sbjct: 6 LTFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIV 65
Query: 168 VHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARD 227
+ ++ + ALVL PTRELA Q+ E K +++ ++GG Q R
Sbjct: 66 ERLVPGQRAVQ-----ALVLTPTRELAIQVAEEITKIGRHARVKTIAIYGGQSIERQIRS 120
Query: 228 LDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 287
L GV++VI TPGR+LD L +L + +VLDEAD MLDMGF I KI++ +R
Sbjct: 121 LRFGVDVVIGTPGRILDHLGRSTLDLSQVRMVVLDEADEMLDMGFIEDIEKILQNTPAER 180
Query: 288 QTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLL 347
QTL++SAT P E++ LA +++D + I+V QL + QI E K L
Sbjct: 181 QTLLFSATMPPEIRRLAGRYMRDPITISVTPQQL----TVPQIDQYFCEVRPSFKTEALT 236
Query: 348 KEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
+ + E + I F TK+ VD++ ++ G
Sbjct: 237 RILDIENVERGICFCRTKKGVDELVEALQARG 268
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 177 bits (430), Expect = 5e-43
Identities = 91/268 (33%), Positives = 157/268 (58%), Gaps = 6/268 (2%)
Query: 107 TLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPA 166
T+ F + ++ I++ G+ PTPIQA+ P+ L G+D++G A TG+GKT ++ +P
Sbjct: 81 TMQFRSLAIIEPILQAIEEEGYQTPTPIQAEAIPLILDGNDLLGCAQTGTGKTAAFAIPV 140
Query: 167 IVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQAR 226
+ +N + + +L++ PTRELA QI E + + + +T +FGG + PQ
Sbjct: 141 LQLLNAVKTNEKKRKIRSLIITPTRELAIQIGESFKAYGRHTGLTSTVIFGGVNQNPQTA 200
Query: 227 DLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD 286
L G++I+IATPGRLLD + G +L+ + VLDEADRMLDMGF IRKI+ ++
Sbjct: 201 SLQKGIDILIATPGRLLDLMNQGHLHLRNIEFFVLDEADRMLDMGFIHDIRKILAELPKK 260
Query: 287 RQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTL 346
+Q+L +SAT P E+ LA+ L + ++++V + + ++II+ + + + + L
Sbjct: 261 KQSLFFSATMPPEITRLAASILHNPVEVSVTPVS-----STVEIINQQIFFVDKGNKNNL 315
Query: 347 LKEIMAEKENKT-IIFIETKRRVDDITR 373
L ++ ++ KT ++F TK D + +
Sbjct: 316 LVHLLKNQDIKTALVFTRTKHGADKVVK 343
>UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5;
Trypanosoma|Rep: Mitochondrial DEAD box protein -
Trypanosoma brucei
Length = 546
Score = 177 bits (430), Expect = 5e-43
Identities = 108/288 (37%), Positives = 158/288 (54%), Gaps = 14/288 (4%)
Query: 99 KGRNIP-KPTLTFDEA-GFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGS 156
KG +P P F + PD++ + GF+ TPIQ+ P+ GHDM+G+A TGS
Sbjct: 107 KGNAVPVNPVKLFSDLDNLPDWLSKGLQSSGFSCTTPIQSYTIPVLDEGHDMIGLAPTGS 166
Query: 157 GKTLSYILPAIVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLF 216
GKT+++ +PA+ P S P +VLAPTREL QQ +V + ++ K+ +
Sbjct: 167 GKTVAFAVPALKKFQWSPNGS----PRIVVLAPTRELVQQTAKVFHQLSS-GKVRVCEAY 221
Query: 217 GGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQI 276
GGAP+ QAR L G ++++A PGRL DFL++G ++LV DEADR+LDMGF+ Q+
Sbjct: 222 GGAPREAQARRLHNGCDVLVACPGRLKDFLQNGDVIFDEVSFLVFDEADRLLDMGFKVQL 281
Query: 277 RKIIEQIRPDR--QTLMWSATWPREVQSLASEFLKD---YLQINVGSLQLAANHNILQII 331
I+ R QT+MWSATWP V+ LA E+L ++ L N NI Q I
Sbjct: 282 DDILGYFSSHRPAQTMMWSATWPPVVEQLAQEYLSQNRYVIRSGTAGTGLQVNENIKQHI 341
Query: 332 DVCMEYEKETK-LSTLLKE-IMAEKENKTIIFIETKRRVDDITRKMKR 377
E+ K L +L+KE + E K +IF+E + ++ + R
Sbjct: 342 FFADAPEERVKTLVSLIKEGKIDENTAKMMIFVERQTDTENAAYALAR 389
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 176 bits (428), Expect = 9e-43
Identities = 94/273 (34%), Positives = 150/273 (54%), Gaps = 5/273 (1%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
++FD G ++ + + G+ +PTPIQ Q P L G D++ A TG+GKT + LP +
Sbjct: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60
Query: 168 VHINNQPKSSRGDGPI-ALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQAR 226
H+ + ++G P+ AL+L PTRELA QI E ++ I + +FGG PQ
Sbjct: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120
Query: 227 DLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD 286
L GV++++ATPGRLLD L + LVLDEADRMLDMGF IR+++ ++
Sbjct: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180
Query: 287 RQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTL 346
RQ L++SAT+ ++++LA + L + L+I V A++ Q+ +K+ K L
Sbjct: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASD----QVTQHVHFVDKKRKRELL 236
Query: 347 LKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
I + ++F TK + + ++ +DG
Sbjct: 237 SHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDG 269
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 175 bits (427), Expect = 1e-42
Identities = 101/275 (36%), Positives = 155/275 (56%), Gaps = 10/275 (3%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
+ FDE D V+D +D M F + TP+QA P L G D++ A TG+GKT +Y+LP +
Sbjct: 1 MRFDELNLGDEVLDGLDAMNFIETTPVQAATIPPILEGRDVIACAQTGTGKTAAYLLPIL 60
Query: 168 VHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPK---GPQ 224
++ +S D A+++APTRELAQQI + + F+ + ++GG Q
Sbjct: 61 DRLSAGEFAS--DVVNAVIMAPTRELAQQIDQQVEGFSYFMPVSAVAIYGGTDGVAWEQQ 118
Query: 225 ARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIR 284
R + G +IVIATPGRL+ L G +L +Y VLDEADRMLDMGF I +I +Q+
Sbjct: 119 RRGMAMGADIVIATPGRLISHLNLGSADLSHVSYFVLDEADRMLDMGFFDDIMQIYKQLP 178
Query: 285 PDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLS 344
QT+M+SAT P +++ LA+ L+D +++ + + +I+Q +C E + KL
Sbjct: 179 SSCQTVMFSATMPPKIRKLAASILRDPIEVEIAISR--PPESIMQSAYICHEAQ---KLP 233
Query: 345 TLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
L K +TIIF K +V ++T +++ G
Sbjct: 234 ILRKLFEQSAPKRTIIFASAKLKVRELTSTLRKMG 268
>UniRef50_Q54DV7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 777
Score = 175 bits (426), Expect = 2e-42
Identities = 123/355 (34%), Positives = 186/355 (52%), Gaps = 50/355 (14%)
Query: 65 LKPFKKDFY---VPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMD 121
L P KK ++ + L E E ++ ++ + G+ IP+P +TF++ P +
Sbjct: 239 LPPIKKRYWKDTMKQLTSEDHREMRIKI-KANVSTSFDGQEIPRPIITFEDQDLPLSMKK 297
Query: 122 EIDKM-----GFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHI------ 170
I + PTP+Q+Q WP LSG D++ IA TGSGKTL Y+LPAI +I
Sbjct: 298 FIGFLTTKYPSITAPTPVQSQCWPGILSGQDILSIAQTGSGKTLGYLLPAIPNILEHLRQ 357
Query: 171 --------------NNQPKS----SRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHN 212
N+ KS + GP+ L++ PTRELA+Q++ C + IH+
Sbjct: 358 RKIRRQQMTMQEKLENKKKSKLLKNTNMGPMVLIIVPTRELAKQVESSCKPLRSKFNIHS 417
Query: 213 TCLFGGAPKGPQARDL-DAGVEIVIATPGRLLDFLESGRTN---LKRCTYLVLDEADRML 268
++GG Q L EI+IATPGRL+D ++ + L L+LDEADRML
Sbjct: 418 IAIYGGVDANEQKDILGQEHNEIIIATPGRLVDLIQRSKEVVGLLGGVGMLILDEADRML 477
Query: 269 DMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDYLQI-------NVGSLQL 321
+GF Q++KI EQIRPDRQTLM+SAT+P+ +Q A ++L + L+I N GS +
Sbjct: 478 QLGFGDQLQKISEQIRPDRQTLMFSATFPQTMQDAAKKWLTNPLKIRVKSSSTNQGSTSI 537
Query: 322 AANHNILQIIDVCMEYEKETKLSTLL-----KEIMAEKENKTIIFIETKRRVDDI 371
+ N+ Q++ E EK L+T + KE++ + +IF+ T + V I
Sbjct: 538 ISK-NVKQVVKPIAEKEKSKYLTTFINSIMKKELLLRNRSLILIFVNTIKSVKPI 591
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 175 bits (425), Expect = 2e-42
Identities = 99/258 (38%), Positives = 150/258 (58%), Gaps = 7/258 (2%)
Query: 123 IDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGP 182
+ +G+ +PTPIQ+Q P+ L G D++ A TG+GKT S+ LP I ++ P G P
Sbjct: 19 LKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPIIEKLSKNPID--GYRP 76
Query: 183 I-ALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGR 241
+ ALVLAPTRELA Q+ + ++ + ++GG P Q + L G +I++ATPGR
Sbjct: 77 VRALVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGVPVENQIKRLKRGTDILVATPGR 136
Query: 242 LLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQ 301
LLD L +L++ YLVLDEADRMLD+GF I+KI++ DRQTL+++AT V+
Sbjct: 137 LLDLLRQKAISLEKLEYLVLDEADRMLDLGFIDPIQKIMDYAADDRQTLLFTATADESVE 196
Query: 302 SLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIF 361
LA +L + +I V N QI + + K L I K +T++F
Sbjct: 197 VLAEFYLNNPTKIKV----TPRNSTAKQIRQFAYQVDYGQKADILSYLITEGKWGQTLVF 252
Query: 362 IETKRRVDDITRKMKRDG 379
+ TK+RVD++T+ + ++G
Sbjct: 253 VRTKKRVDELTQYLCKEG 270
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 175 bits (425), Expect = 2e-42
Identities = 93/249 (37%), Positives = 138/249 (55%), Gaps = 4/249 (1%)
Query: 131 PTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLAPT 190
PTPIQ Q P L G D++G A TG+GKT ++ LP + ++ + P LVL+PT
Sbjct: 19 PTPIQGQAIPHLLEGSDLIGCAQTGTGKTAAFALPILNQLDLDRSRADACAPQVLVLSPT 78
Query: 191 RELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGR 250
RELA QI + + + K T +FGG + PQ R L GV + IATPGRLLD ++ G
Sbjct: 79 RELAVQIAQSFNVYGRNVKFRLTTIFGGVGQNPQVRALKRGVHVAIATPGRLLDLMDQGY 138
Query: 251 TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKD 310
+L + VLDEADRMLDMGF P ++ I+ ++ RQT+ ++AT P +V LAS L +
Sbjct: 139 VDLSQAKTFVLDEADRMLDMGFMPALKTIVSKLPKQRQTIFFTATMPPKVAQLASGLLNN 198
Query: 311 YLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDD 370
++I V A ++ M + K + L + AE +T++F +TK D
Sbjct: 199 PVRIEVAPESTTAE----RVEQRLMYVSQGDKRALLEHSLQAEGVGRTLVFTKTKHGADR 254
Query: 371 ITRKMKRDG 379
+ +++ G
Sbjct: 255 LAKELNASG 263
>UniRef50_A2E9Y0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 536
Score = 174 bits (423), Expect = 4e-42
Identities = 91/299 (30%), Positives = 167/299 (55%), Gaps = 10/299 (3%)
Query: 86 DVEAWRSENEITLKGR-NIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALS 144
++ WR++N++ + + + P + + ++ E+ + FAKP IQA P+++
Sbjct: 117 EIRLWRNDNQVNFRAKFKVSTPPMIEWGSPLQPELVSELREQNFAKPLVIQAASIPLSID 176
Query: 145 GHDMVGIASTGSGKTLSYILPAIVHI----NNQPKSSRGDGPIALVLAPTRELAQQIQEV 200
+D++G++ G+GKTL+Y++P + +I N P+++ P+++VL PT ELA Q+QEV
Sbjct: 177 SYDIIGLSQPGTGKTLAYVIPLLYYILEYKKNHPETNNFSIPLSVVLVPTHELAVQVQEV 236
Query: 201 CDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLV 260
DK I + L G QA +L +++ATPGRL D +E+ ++K+ ++V
Sbjct: 237 IDKLGINLGIKSRTLTGSFRLNDQALELSHENHVIVATPGRLKDAIEAHLVSVKKVFFIV 296
Query: 261 LDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQ 320
+DEAD+M+D PQI I+ + ++ +M+SAT P EV S+ EF + ++VG +
Sbjct: 297 MDEADKMVDKSLGPQISFILNECPKEKHLMMFSATMPHEVLSIVEEFFTKVVTVSVGEIG 356
Query: 321 LAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
A+ NI Q++ C + + +L LLK + K I+F T+ + +++ +G
Sbjct: 357 -GASENIKQVVHYCRQAD---RLGLLLKSLRGMKA-PIIVFTNTRDSCEKSAMEIQNNG 410
>UniRef50_A2D755 Cluster: DEAD/DEAH box helicase family protein; n=1;
Trichomonas vaginalis G3|Rep: DEAD/DEAH box helicase
family protein - Trichomonas vaginalis G3
Length = 1123
Score = 174 bits (423), Expect = 4e-42
Identities = 103/302 (34%), Positives = 167/302 (55%), Gaps = 11/302 (3%)
Query: 74 VPHLDV---EKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAK 130
+ H+++ E PE + + N + P+ F + + I K+ + +
Sbjct: 705 IAHMNISMPEVSPEEFKDFTETYNIKLISDNPGPQTLFEFSPNFLDENTLSNIKKLEYTQ 764
Query: 131 PTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLAPT 190
PT IQ PIA +G D++GIA TGSGKT SYI+PAI H+ Q + +GP L++APT
Sbjct: 765 PTDIQKIAIPIAYAGRDLIGIAKTGSGKTASYIIPAIKHVMLQ---NGREGPHVLIIAPT 821
Query: 191 RELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGR 250
+ELAQQI+ ++ S I ++ + Q + +IVIAT GRLLDF+ S
Sbjct: 822 KELAQQIEIKANQLLENSPIKAVAIYASPNRREQINAVKKA-DIVIATFGRLLDFMSSNF 880
Query: 251 TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKD 310
L +V+DEAD +L + Q+ I++ + D Q LMWSA+W EV+ LA ++LK+
Sbjct: 881 VKLNGIGMVVIDEADNILKNDNQQQLGAILKHVPIDSQYLMWSASWIDEVRDLAEQYLKN 940
Query: 311 YLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKEN---KTIIFIETKRR 367
Y++I V + +L N +I QII + E ++ ++K+I+A+ ++ K +IF+ T +
Sbjct: 941 YIKIVVDAFELTVNKDIKQII-IRKEGNPIIQVEEIIKKILADSKSDRIKILIFVNTSDK 999
Query: 368 VD 369
+D
Sbjct: 1000 ID 1001
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 173 bits (422), Expect = 5e-42
Identities = 97/272 (35%), Positives = 149/272 (54%), Gaps = 8/272 (2%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
L+F E G ++ ++K+GF PT IQAQ P LSG D+VG + TG+GKT ++ LP +
Sbjct: 3 LSFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPIL 62
Query: 168 VHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARD 227
++ Q K+ + A+VL PTRELA Q+ + +F S + ++GG Q
Sbjct: 63 ERLDPQQKAVQ-----AIVLTPTRELAIQVHDAMAQFVGNSGLRTLAIYGGQSIDRQMLQ 117
Query: 228 LDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 287
L GV IV+ TPGR++D LE G L + + VLDEAD ML MGF + KI+ Q DR
Sbjct: 118 LKRGVHIVVGTPGRVIDLLERGNLKLDQVKWFVLDEADEMLSMGFIDDVEKILSQAPQDR 177
Query: 288 QTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLL 347
QT ++SAT P ++ L ++FL+ + + V + N I Q+ + + TK L
Sbjct: 178 QTALFSATMPPSIRMLVNKFLRSPVTVTVEQPKATPN-KINQVAYLIPRH--WTKARALQ 234
Query: 348 KEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
+ E +IF+ T+R ++T +++ G
Sbjct: 235 PILEMEDPETALIFVRTRRTAAELTSQLQAAG 266
>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 533
Score = 173 bits (422), Expect = 5e-42
Identities = 101/274 (36%), Positives = 153/274 (55%), Gaps = 7/274 (2%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
++F E G ++ + G+ TP+Q Q P ALSG D++ + TGSGKT +++LP+I
Sbjct: 1 MSFSELGLDPLILKSVLAAGYENATPVQQQAIPAALSGGDLLVSSHTGSGKTAAFLLPSI 60
Query: 168 VHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNT-CLFGGAPKGPQAR 226
+ +P + + GP LVL PTRELA Q+++ + + T CL GGAP G Q +
Sbjct: 61 QRLLAEP-AVKSIGPRVLVLTPTRELALQVEKAAMTYGKEMRRFRTACLVGGAPYGLQLK 119
Query: 227 DLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD 286
L V++V+ATPGRL+D LE G+ + R LVLDEADRMLDMGF I+ I + +
Sbjct: 120 RLSQPVDVVVATPGRLIDHLERGKIDFSRLEVLVLDEADRMLDMGFVDDIKAIAARCPAE 179
Query: 287 RQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTL 346
RQTL++SAT V +LA E +D +I + A H +I + + + L
Sbjct: 180 RQTLLFSATLDGVVGNLARELTRDAQRIEIE----AVPHKEAKIEQRLLFADNMDHKNRL 235
Query: 347 LKEIMAEKEN-KTIIFIETKRRVDDITRKMKRDG 379
L ++ + E + I+F TKR ++I+ + G
Sbjct: 236 LDALLRDVEMVQAIVFASTKRSTEEISDLLAESG 269
>UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=4;
Sphingobacteriales|Rep: Possible ATP-dependent RNA
helicase - Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469)
Length = 463
Score = 173 bits (422), Expect = 5e-42
Identities = 98/264 (37%), Positives = 148/264 (56%), Gaps = 6/264 (2%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
L F+E +++ I++ G+ +PT IQ++ P L+GHD++G+A TG+GKT +Y LP +
Sbjct: 5 LNFEELKLNRQLLNAIEEAGYTEPTEIQSKAIPQILAGHDIIGVAQTGTGKTAAYALPIL 64
Query: 168 VHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARD 227
+ I K ++G P A++ PTREL QI+ + A + + L+GG Q
Sbjct: 65 MKI----KYAQGHNPRAVIFGPTRELVMQIEIAMKQLAKYTDLRIVALYGGIGPKLQKEH 120
Query: 228 LDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 287
L GV+I++ATPGR LD LK +VLDEAD+M+DMGF PQ+RK++E I R
Sbjct: 121 LQKGVDIIVATPGRFLDLYLEEEIVLKEVKTMVLDEADKMMDMGFMPQLRKMLEVIPRKR 180
Query: 288 QTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLL 347
Q L++SAT V+ L EFL+ ++I V A ++ V K L L+
Sbjct: 181 QNLLFSATMSERVERLTEEFLEYPMKIEVTPQATPATLISQKLYKVPNFKTKIHLLEYLI 240
Query: 348 KEIMAEKENKTIIFIETKRRVDDI 371
++ E + IIF+ TK+ DDI
Sbjct: 241 RK--DESVTRAIIFVRTKKSADDI 262
>UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 757
Score = 173 bits (422), Expect = 5e-42
Identities = 92/188 (48%), Positives = 123/188 (65%), Gaps = 7/188 (3%)
Query: 123 IDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDG- 181
I + + KPTPIQ PIA++G D++ A TGSGKT ++ P I I S G
Sbjct: 135 IRRCKYVKPTPIQRHAIPIAMAGRDLMACAQTGSGKTAAFCFPIICGILRNQLSRGGARL 194
Query: 182 --PIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATP 239
P AL+L+PTREL+ QI E KF+ + + +GGAP Q R+L+ GV+I++ATP
Sbjct: 195 ACPTALILSPTRELSCQIHEEAKKFSYKTGLKVVVAYGGAPISQQFRNLERGVDILVATP 254
Query: 240 GRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQI-RPD---RQTLMWSAT 295
GRL+D +E R +L+ YL LDEADRMLDMGFEPQIRKI+EQ+ P RQT+++SAT
Sbjct: 255 GRLVDMIERARVSLRMIKYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGARQTMLFSAT 314
Query: 296 WPREVQSL 303
+P E+Q L
Sbjct: 315 FPNEIQIL 322
Score = 33.9 bits (74), Expect = 7.1
Identities = 26/97 (26%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 291 MWSATW--PREVQS--LASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTL 346
++ A W P +V+ L F +Y+ ++VG + ++ I+Q ++ + +K L L
Sbjct: 461 LFGANWVFPEKVKEIGLLRIFYANYIFLSVGRVG-SSTDLIVQRVEFVEDTDKRYHLMDL 519
Query: 347 LKEIMAEKENK----TIIFIETKRRVDDITRKMKRDG 379
L+ M + K T++F+ETKR VD + + + +G
Sbjct: 520 LQSQMTNRTPKKYALTLVFVETKRGVDALEQWLCMNG 556
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 173 bits (421), Expect = 6e-42
Identities = 94/273 (34%), Positives = 156/273 (57%), Gaps = 6/273 (2%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
++F GF V+ +++ G+ K TPIQ + P+A GHD+ A TG+GKT ++ LP I
Sbjct: 1 MSFASQGFAPEVVKALEECGYEKLTPIQQKAIPVARRGHDIFATAQTGTGKTAAFSLPLI 60
Query: 168 VHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARD 227
+ KS+ AL+ APTRELA+QI + + + + +FGG Q R
Sbjct: 61 QQLLESGKSASRKTARALIFAPTRELAEQIADNIKAYTKYTNLSVAAIFGGRKMSSQERM 120
Query: 228 LDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 287
L+ GV+I++ATPGRL + +ESG ++ +LV DEADR+LDMGF +RKI+ + +
Sbjct: 121 LENGVDILVATPGRLEEHIESGNVSVANIEFLVFDEADRILDMGFINAVRKIMLDVETNP 180
Query: 288 QTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLL 347
Q +M+SAT ++ L+ + L+ +I V A H + ++ ++ E++T+ LL
Sbjct: 181 QIMMFSATTSSQLNELSKDILRKPKRIAVERENTTA-HTVAHVL-YPVDQERKTE---LL 235
Query: 348 KEIMAEKE-NKTIIFIETKRRVDDITRKMKRDG 379
E++ K + ++F+ K +DI +++K DG
Sbjct: 236 SELIGRKNWQQVLVFVNYKETANDIVKELKLDG 268
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 173 bits (421), Expect = 6e-42
Identities = 105/269 (39%), Positives = 152/269 (56%), Gaps = 12/269 (4%)
Query: 110 FDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVH 169
F+E G V+D + MGF K PIQ P+ L+G D+VG A TG+GKT +Y + +
Sbjct: 4 FEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISMLQE 63
Query: 170 INNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLD 229
I G G L++APTRELA QI E KFA +K+ ++GG G Q L
Sbjct: 64 IKE------GGGIQGLIVAPTRELAVQITEEVKKFAKYTKVRPVAIYGGQSMGVQLDALK 117
Query: 230 AGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQT 289
G EI++ATPGRL+D ++ G ++ R T+LVLDEAD MLDMGF I+ I++ + PD +
Sbjct: 118 RGAEILVATPGRLIDHIKRGSISIDRVTHLVLDEADTMLDMGFIDDIQFILD-LTPDEKV 176
Query: 290 L-MWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLK 348
+ ++SAT P E+ L+ E+LK+ Q + + L + I Q V + EK L +K
Sbjct: 177 MSLFSATMPIEILRLSEEYLKNPKQFLLDADDL-SGEGIDQSYLVIRDREKMDYLVDFIK 235
Query: 349 EIMAEKENKTIIFIETKRRVDDITRKMKR 377
E + +TI+F TK R D+ R + +
Sbjct: 236 E---NGKGQTIVFCSTKYRTRDVARMLHK 261
>UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=34; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX59 - Homo sapiens (Human)
Length = 619
Score = 173 bits (421), Expect = 6e-42
Identities = 102/306 (33%), Positives = 165/306 (53%), Gaps = 8/306 (2%)
Query: 73 YVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPT 132
Y H + E +E + + I ++G+ + +P + F+ P+ + + K G+ PT
Sbjct: 168 YKEHPFILNLQEDQIENLKQQLGILVQGQEVTRPIIDFEHCSLPEVLNHNLKKSGYEVPT 227
Query: 133 PIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLAPTRE 192
PIQ Q P+ L G D++ A TGSGKT +++LP I+ + K+ P AL+L PTRE
Sbjct: 228 PIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIMRALFESKT-----PSALILTPTRE 282
Query: 193 LAQQIQ-EVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRT 251
LA QI+ + + + ++ L GG P PQ L V+++IATPGRLLD ++
Sbjct: 283 LAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQHVKVIIATPGRLLDIIKQSSV 342
Query: 252 NLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDY 311
L +V+DEAD ML MGF+ Q+ I+E I D QT++ SAT P ++ LAS+ L +
Sbjct: 343 ELCGVKIVVVDEADTMLKMGFQQQVLDILENIPNDCQTILVSATIPTSIEQLASQLLHNP 402
Query: 312 LQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDI 371
++I G L N+ QII + K+ KL +L + K ++F++ K D +
Sbjct: 403 VRIITGEKNLPC-ANVRQIILWVEDPAKKKKLFEILNDKKLFKP-PVLVFVDCKLGADLL 460
Query: 372 TRKMKR 377
+ +++
Sbjct: 461 SEAVQK 466
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 173 bits (420), Expect = 8e-42
Identities = 97/274 (35%), Positives = 158/274 (57%), Gaps = 11/274 (4%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
+TF + ++ +++ G+ PTPIQA+ P AL G D++ A TGSGKT ++++P +
Sbjct: 44 VTFTDLNIAKPILSALERSGYTHPTPIQAEAIPFALQGRDLLLSAQTGSGKTAAFVIPVL 103
Query: 168 VHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSK-IHNTCLFGGAPKGPQAR 226
++ + AL+L PTRELAQQ+ + ++ + + L GGAP Q
Sbjct: 104 DRLSRATSFDKLTK--ALILTPTRELAQQVHDSVRTYSKDMRGLFCVPLVGGAPYNGQIT 161
Query: 227 DLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD 286
L GV++++ATPGRLLD + +GR +L LVLDEADRMLDMGF I I+ D
Sbjct: 162 ALKKGVQVIVATPGRLLDHINAGRVDLSSLEILVLDEADRMLDMGFADDISDILRAAPID 221
Query: 287 RQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTL 346
RQT+M SATW V +A+ F K+ ++ S+++ + H I + + C +++ + + L
Sbjct: 222 RQTIMCSATWDGPVGKIAASFTKNPERV---SIKVESAH-IEEKVYYCDDFDHKNR---L 274
Query: 347 LKEIMAEKE-NKTIIFIETKRRVDDITRKMKRDG 379
L +I+ K+ + IIF TKR + + ++++ G
Sbjct: 275 LDKIVCHKDMEQIIIFAATKRSTEKLAKQLQEAG 308
>UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:
VASA RNA helicase - Moina macrocopa
Length = 843
Score = 173 bits (420), Expect = 8e-42
Identities = 98/288 (34%), Positives = 159/288 (55%), Gaps = 13/288 (4%)
Query: 93 ENEIT-LKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGI 151
EN I + G N+P +F+ AG D V+ I G+ KPTP+Q + L+ D++
Sbjct: 393 ENAILQVTGNNVPNYITSFETAGLRDLVLQNIKASGYTKPTPVQKGAIAVVLARRDLIAS 452
Query: 152 ASTGSGKTLSYILPAI-VHINNQPK---SSRGDGPIALVLAPTRELAQQIQEVCDKFANT 207
A TGSGKT ++++P + + + Q + S P ++++PTRELA QI KF++
Sbjct: 453 AVTGSGKTAAFLVPVVNILLEKQVQGAPSGEVQKPEVVIISPTRELAIQIHREARKFSHN 512
Query: 208 SKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRM 267
S + + ++GG Q L G I++ TPGRL DF++ G + + +LDEADRM
Sbjct: 513 SVLKSVIVYGGTQVSHQKSSLMNGCNILVGTPGRLKDFVDKGFIDFSNVQFFILDEADRM 572
Query: 268 LDMGFEPQIRKIIEQ--IRP--DRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAA 323
LDMGF I I + + P R TLM+SAT+P +VQ +A ++L DY+ + G++
Sbjct: 573 LDMGFGSDIEFIAQHPTMTPVGRRVTLMFSATFPDDVQKIAGKYLHDYVFVTTGNIG-GM 631
Query: 324 NHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDI 371
N ++ Q +K KL +L+++ ++ I+F+E+K+ D I
Sbjct: 632 NPDVCQEFHEVQRQDKRNKLVEILRDL---GNSRVIVFVESKKTADFI 676
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 173 bits (420), Expect = 8e-42
Identities = 97/270 (35%), Positives = 157/270 (58%), Gaps = 12/270 (4%)
Query: 109 TFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIV 168
+F + G D ++ I+ F +PT IQ P+ L G D++G A+TGSGKTL++ I
Sbjct: 3 SFKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGCGII- 61
Query: 169 HINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDL 228
K +G+G ALVL PTRELA+Q+Q +F+ ++ ++GG PQ R L
Sbjct: 62 -----QKIEKGNGIRALVLTPTRELAEQVQNSLKEFSRHKQLRVAPIYGGVAINPQIRQL 116
Query: 229 DAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 288
+ ++V+ATPGRLLD +E G +L LVLDEADRMLDMGF + +II++ DRQ
Sbjct: 117 ERA-DVVVATPGRLLDHIERGTIDLGDVEILVLDEADRMLDMGFIDDVEEIIDECPSDRQ 175
Query: 289 TLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLK 348
T+M+SAT +++Q L+S+++ N + A + ++ V ++ K+ K S L+
Sbjct: 176 TMMFSATVSKDIQYLSSKYMN-----NPSKVFAKAYVDSDKLKQVYIDVPKKMKFSLLVH 230
Query: 349 EIMAEKENKTIIFIETKRRVDDITRKMKRD 378
+ +EK ++F T+ VD + + ++++
Sbjct: 231 LLKSEKSGLVMVFCNTRSNVDFVQKNLRKN 260
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 172 bits (419), Expect = 1e-41
Identities = 93/273 (34%), Positives = 154/273 (56%), Gaps = 7/273 (2%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
+ F + G ++ + ++G+ PTPIQ + P L+G +++ A TG+GKT S++LP +
Sbjct: 1 MPFSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAGKNVLAAAQTGTGKTASFVLPLL 60
Query: 168 VHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARD 227
+ PK R A++L PTRELA Q++E +++A + ++GG PQ +
Sbjct: 61 HRFADAPKI-RPKRVRAIILTPTRELALQVEENINQYAKYLPLTAMAMYGGVDAAPQKKR 119
Query: 228 LDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 287
L GV++++ATPGRLLD + LVLDEADRMLDMGF I IIE++ R
Sbjct: 120 LIEGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINSIIEKLPEQR 179
Query: 288 QTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLL 347
Q L++SAT ++V++LA + D ++I + A+ H ID + + K S LL
Sbjct: 180 QNLLFSATLSKQVKALAKSAIPDAIEIEISRKSAASTH-----IDQWLTTVDKDKKSALL 234
Query: 348 KEIMAEKE-NKTIIFIETKRRVDDITRKMKRDG 379
++ E+ ++ +IFI+TK + ++++ G
Sbjct: 235 SHLIQEQNWSQALIFIQTKHGAAKLVSQLEKRG 267
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 172 bits (419), Expect = 1e-41
Identities = 92/273 (33%), Positives = 147/273 (53%), Gaps = 10/273 (3%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
+TF++ G P++++ + +GF P+PIQ P L+G+D++G+A TGSGKT ++ LP +
Sbjct: 5 ITFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLL 64
Query: 168 VHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSK-IHNTCLFGGAPKGPQAR 226
I+ K P LV+APTRELA Q+ + C+ F ++ L+GG Q R
Sbjct: 65 AQIDPSEKH-----PQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLR 119
Query: 227 DLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD 286
L G ++V+ TPGR+LD + G NL ++VLDEAD ML MGF + ++ ++ +
Sbjct: 120 ALKQGAQVVVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLRMGFIDDVETVMAELPEN 179
Query: 287 RQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTL 346
QT ++SAT P ++ + F+ D ++ + N N I C K L
Sbjct: 180 HQTALFSATMPEPIRRITKRFMNDPQEVKI----KVNNENAPDIDQSCWYVHGVRKNEAL 235
Query: 347 LKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
L+ + E + IIF TK DIT ++++G
Sbjct: 236 LRFLEVEDFDAAIIFARTKTGTLDITELLEKNG 268
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 172 bits (418), Expect = 1e-41
Identities = 93/272 (34%), Positives = 153/272 (56%), Gaps = 10/272 (3%)
Query: 109 TFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSG-HDMVGIASTGSGKTLSYILPAI 167
+F G D +++ ++K GF PTPIQ Q PI + G D+VG A TG+GKT ++ +P +
Sbjct: 3 SFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPIL 62
Query: 168 VHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARD 227
I+ ++++ AL+LAPTRELA Q+ E D + +++ ++GG Q R+
Sbjct: 63 ETIDESSRNTQ-----ALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIRE 117
Query: 228 LDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 287
L GV+IV+ TPGR+LD + L+ +Y+VLDEAD ML+MGF + +I++ + ++
Sbjct: 118 LRRGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTEK 177
Query: 288 QTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLL 347
+ L++SAT P + LA ++++Y I V QL ++ K L
Sbjct: 178 RMLLFSATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSFYEI----HSRDKFELLS 233
Query: 348 KEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
+ I EKE +IF +TK VD+++ ++ G
Sbjct: 234 RIIDLEKEFYGLIFCKTKADVDEVSSRLNEKG 265
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 171 bits (417), Expect = 2e-41
Identities = 99/272 (36%), Positives = 152/272 (55%), Gaps = 7/272 (2%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
+TF+ + ++ + + G+ PTPIQ Q PI L G D++G A TG+GKT ++ +P +
Sbjct: 1 MTFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPIL 60
Query: 168 VHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARD 227
+ K+ G ALVL PTRELA QI E + + + + + +FGG + PQ
Sbjct: 61 QKLY---KTDHRKGIKALVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDA 117
Query: 228 LDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 287
L +G++I++ATPGRLLD + G +L + VLDEADRMLDMGF I++I++ + R
Sbjct: 118 LRSGIQILVATPGRLLDLISQGFISLSSLDFFVLDEADRMLDMGFIHDIKRILKLLPARR 177
Query: 288 QTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLL 347
QTL +SAT P E+++LA+ L ++ V + I Q + + EK+ L LL
Sbjct: 178 QTLFFSATMPPEIETLANSMLTKPEKVEVTPASSTVD-IISQQVYFVEKKEKKDLLIHLL 236
Query: 348 KEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
K+ E +IF TK D + R + + G
Sbjct: 237 KDTSIE---SVLIFTRTKYGADKLARVLTKAG 265
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 171 bits (417), Expect = 2e-41
Identities = 97/272 (35%), Positives = 150/272 (55%), Gaps = 6/272 (2%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
L E G ++ + G K PIQ A+ G DM+G A TG+GKTL++ +P I
Sbjct: 104 LAISELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPII 163
Query: 168 VHI-NNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQAR 226
I K RG P+ LVLAPTRELA+Q+++ + A + + CL+GG P G Q R
Sbjct: 164 DKIIKYNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPS--LDTICLYGGTPIGQQMR 221
Query: 227 DLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD 286
LD GV++ + TPGR++D ++ G NL ++VLDEAD+ML +GF + I+E++
Sbjct: 222 QLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEK 281
Query: 287 RQTLMWSATWPREVQSLASEFLKDYLQIN-VGSLQLAANHNILQIIDVCMEYEKETKLST 345
RQ++M+SAT P ++SL ++L + L ++ VG I + Y + + +
Sbjct: 282 RQSMMFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYGRASIIGP 341
Query: 346 LLKEIMAEKENKTIIFIETKRRVDDITRKMKR 377
L+ E K K I+F +TKR D ++ + R
Sbjct: 342 LVTE--HAKGGKCIVFTQTKRDADRLSYALAR 371
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 171 bits (416), Expect = 3e-41
Identities = 89/260 (34%), Positives = 148/260 (56%), Gaps = 6/260 (2%)
Query: 119 VMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSR 178
++D ++ G+ +PTPIQ + P ++G+D++GIA TG+GKT ++ LP I +
Sbjct: 13 IIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIINKFGRNKIDIK 72
Query: 179 GDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIAT 238
+L+L PTRELA QI + D +++ + ++GG + Q ++ G++I++AT
Sbjct: 73 AKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDSIELGLDILVAT 132
Query: 239 PGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPR 298
PGRLLD +E+G N K VLDEAD MLDMGF ++ II ++ RQTL++SAT P
Sbjct: 133 PGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKSRQTLLFSATMPA 192
Query: 299 EVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEY-EKETKLSTLLKEIMAEKENK 357
E++ LA L D +I Q+ A + +++ + + +K K+ L + K
Sbjct: 193 EIEILAEAILTDPTKI-----QITAETVTIDLVNQSVYHLDKSNKVPLLFNILTKADYEK 247
Query: 358 TIIFIETKRRVDDITRKMKR 377
+IF +TK D I + +++
Sbjct: 248 VLIFCKTKYGADIIVKALEK 267
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 171 bits (416), Expect = 3e-41
Identities = 96/269 (35%), Positives = 144/269 (53%), Gaps = 8/269 (2%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
+ F + G P ++ + MG+ PTP+Q + P+ L+G D+V A TG+GKT ++ LP +
Sbjct: 1 MPFSKLGLPSSLVRGVQAMGYVDPTPVQLRAIPVVLAGRDLVASAQTGTGKTAAFALPVL 60
Query: 168 VHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARD 227
+ R GP LVL PTREL Q++ F + + +T + GG G Q D
Sbjct: 61 ARLGGH----RPGGPRVLVLEPTRELGAQVETAFRDFGRFTDVRSTIIHGGVGYGKQRSD 116
Query: 228 LDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 287
L AG +IVIAT GRL+DF++ L L+LDE DRMLDMGF +++I+ R
Sbjct: 117 LRAGTDIVIATVGRLMDFIKEKEIRLDSVEVLILDEVDRMLDMGFINDVKRIVGLCPKQR 176
Query: 288 QTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLL 347
QTL +SAT P E++ +A L++ +I +G + N ++ I +K L +L
Sbjct: 177 QTLFFSATIPPEIEDVARFALQNPERIEIGRAR-TVNESVKHAIYPVTFEQKFDLLCAIL 235
Query: 348 KEIMAEKENKTIIFIETKRRVDDITRKMK 376
++ E IIF TK D I R++K
Sbjct: 236 DKLDYE---SVIIFSRTKHGADRIARRLK 261
>UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium
falciparum|Rep: DEAD box DNA helicase - Plasmodium
falciparum
Length = 516
Score = 171 bits (416), Expect = 3e-41
Identities = 85/202 (42%), Positives = 126/202 (62%), Gaps = 3/202 (1%)
Query: 176 SSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIV 235
S R L+L PTREL Q+ + F I + ++GG PK Q +L G +I+
Sbjct: 196 SERASDTYGLILLPTRELCLQVLDEIKSFEKNLPIKSVAVYGGVPKYYQINNLKKGADII 255
Query: 236 IATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAT 295
+ATPGRLLDFLE+G NL +C Y+V+DEADR+LDMGFE Q+RKI+ Q+ ++Q L +AT
Sbjct: 256 VATPGRLLDFLENGNINLLKCIYVVIDEADRLLDMGFEKQLRKIMTQVNKNKQLLFLTAT 315
Query: 296 WPREVQSLASEFLK-DYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEK 354
WP +V+ LA +F D ++I +G +L AN NI Q + + + + KL LKE +
Sbjct: 316 WPEQVRKLAYDFCAYDPVKIQIGKNELTANKNIEQNVIISSSIDMKKKLLDWLKE--NYE 373
Query: 355 ENKTIIFIETKRRVDDITRKMK 376
NK +IF +TKR D++ ++++
Sbjct: 374 NNKILIFCDTKRNCDNLGKELR 395
Score = 66.5 bits (155), Expect = 1e-09
Identities = 28/61 (45%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 110 FDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVH 169
F + F + +++ ++ F++PT IQ WPIALSG D++G+A TGSGKTL+++LP +H
Sbjct: 64 FSDVCFHESILNYLNNK-FSEPTAIQKITWPIALSGKDLIGVAETGSGKTLAFVLPCFMH 122
Query: 170 I 170
I
Sbjct: 123 I 123
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 171 bits (415), Expect = 3e-41
Identities = 99/265 (37%), Positives = 146/265 (55%), Gaps = 3/265 (1%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
+TF+ G ++ ++ +G A PTPIQ Q P + G D++GIA TG+GKT ++LP +
Sbjct: 1 MTFEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQTGTGKTGGFLLPVL 60
Query: 168 VHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARD 227
I + G ALVL+PTRELA QI + +A + L GG Q R+
Sbjct: 61 HKIAEGRR--HGIRNRALVLSPTRELATQIHQAAKDYAKYLHTNAVLLVGGVDFIRQERN 118
Query: 228 LDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 287
L +IV+ATPGRLLD + L + +++DEADRMLDMGF P I I+ Q+ R
Sbjct: 119 LKRNWDIVVATPGRLLDHVRRNNLTLANTSLVIIDEADRMLDMGFLPDINTIVRQLPKGR 178
Query: 288 QTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLL 347
Q+L++SAT P +Q LA+ F D + + V + ++H + I V +K L +L
Sbjct: 179 QSLLFSATCPPRIQELAATFQNDAVIVRVEPERKGSDHIHQEWITVSHGSQKLGLLKKVL 238
Query: 348 KEIMAEKENKTIIFIETKRRVDDIT 372
E +E + IIF TKR +D++
Sbjct: 239 DEGKSE-TGQVIIFTRTKRSAEDLS 262
>UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep:
LOC562123 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 483
Score = 170 bits (414), Expect = 4e-41
Identities = 101/283 (35%), Positives = 147/283 (51%), Gaps = 8/283 (2%)
Query: 68 FKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMG 127
+K+D ++ L E +E ++E I G + +P + F FP + + G
Sbjct: 135 YKQDAFISELT-----EEQIERVKAELGIVSVGTEVCRPVIEFQHCRFPTVLEKNLKVAG 189
Query: 128 FAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVL 187
+ PTP+Q Q P+ L+G D++ A TGSGKT++++LP ++ Q +S+ P L+L
Sbjct: 190 YEAPTPVQMQMVPVGLTGRDVIATADTGSGKTVAFLLPVVMRAL-QSESASPSCPACLIL 248
Query: 188 APTRELAQQIQEVCDKFANTSKIHNTCLF-GGAPKGPQARDLDAGVEIVIATPGRLLDFL 246
PTRELA QI+E + T L GG P PQ L ++IVI TPGRLL+ L
Sbjct: 249 TPTRELAIQIEEQAKELMRGLPNMGTALLVGGMPLPPQLHRLKHNIKIVIGTPGRLLEIL 308
Query: 247 ESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASE 306
+ L +V+DEAD ML MGF+ Q+ I+EQ+ D QTL+ SAT P Q LA
Sbjct: 309 KQKAVQLDHVRTVVVDEADTMLKMGFQQQVLDILEQVPDDHQTLLTSATIPTGTQQLAER 368
Query: 307 FLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKE 349
D + I +G NI QI+ E K+ KL +L +
Sbjct: 369 LTHDPVTITIGQKNQPC-ANIRQIVLWVEEPSKKKKLFEILND 410
>UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4;
Wolbachia|Rep: Superfamily II DNA/RNA helicase -
Wolbachia sp. subsp. Brugia malayi (strain TRS)
Length = 408
Score = 170 bits (414), Expect = 4e-41
Identities = 102/271 (37%), Positives = 149/271 (54%), Gaps = 11/271 (4%)
Query: 109 TFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIV 168
+F E G P + +DK F+ PTP+QAQ P+AL G D++G A TG+GKTL++ +P I
Sbjct: 3 SFYEMGLPLLLAQALDKNSFSVPTPVQAQAIPLALKGKDILGSAQTGTGKTLAFAIPLIA 62
Query: 169 HINNQPKSSRGDGPIALVLAPTRELAQQI-QEVCDKFANTSKIHNTCLFGGAPKGPQARD 227
+ +P +S ALV+ PTRELAQQ+ E+ S + L GG P Q
Sbjct: 63 KLLGEPNAST-----ALVIVPTRELAQQVTNEIGKLLLKNSVLKIALLIGGEPIFRQLNQ 117
Query: 228 LDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 287
L IVI TPGR++D +E + LVLDE DRM DMGF QI I++ + R
Sbjct: 118 LQRRPRIVIGTPGRIIDHIERKTLITNNVSTLVLDEVDRMFDMGFGIQIEGIMKYLPKMR 177
Query: 288 QTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLL 347
Q LM+SAT P ++ LA ++ +++V + + + I Q I E EK KL T L
Sbjct: 178 QNLMFSATLPGDIVKLAEKYSNQPERVSVEN-EATTSVKIKQEIIYASESEKYGKLVTQL 236
Query: 348 KEIMAEKENKTIIFIETKRRVDDITRKMKRD 378
+++ I+F+ TK+R D + K+++D
Sbjct: 237 ----YQRKGSIIVFVRTKQRADQLAYKLRKD 263
>UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 -
Leishmania major
Length = 544
Score = 170 bits (414), Expect = 4e-41
Identities = 100/308 (32%), Positives = 171/308 (55%), Gaps = 17/308 (5%)
Query: 78 DVEKRPESDVEAWRSENEITLKGRNIPK----PTLTFDEA-GFPDYVMDEIDKMGFAKPT 132
D P++ A +E+++++ N + P +F+E P ++ + + + + T
Sbjct: 58 DPHAPPKTRASAVSTEHDVSITDGNGDRVDVTPLNSFEELRDAPRWLAEGLKTLKYPSTT 117
Query: 133 PIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLAPTRE 192
IQ P+ +GHD++G+A TGSGKT+++ +PA+ + P + P LVLAPTRE
Sbjct: 118 DIQKFTIPLLANGHDVIGLAPTGSGKTVAFAVPALAGLKPNPDGT----PSVLVLAPTRE 173
Query: 193 LAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTN 252
L QQ +V ++ +GGAP+ QAR L G + ++A PGRL DFL+ G +
Sbjct: 174 LVQQTTKVFQNLG-CGQVRVCEAYGGAPRDLQARHLRNGCDALVACPGRLKDFLDGGDVS 232
Query: 253 LKRCTYLVLDEADRMLDMGFEPQIRKIIEQI--RPDRQTLMWSATWPREVQSLASEFLKD 310
++ ++LV DEADR+LDMGF+ + +I+ + QT+MWSATWP VQ++A ++L D
Sbjct: 233 IRNLSFLVFDEADRLLDMGFQVHLDEIMAYLDSASHPQTMMWSATWPESVQAMARKYLSD 292
Query: 311 ---YLQINVGSLQLAANHNILQIIDVCMEY-EKETKLSTLLKE-IMAEKENKTIIFIETK 365
++ L N I Q + C + E+ KL +L+++ + + ++K IIF+E +
Sbjct: 293 DRVLIRAGTAGAGLQVNERIKQELIFCRTFTERIEKLGSLVEDGTIDDNKDKLIIFVERQ 352
Query: 366 RRVDDITR 373
++ R
Sbjct: 353 ADTENTAR 360
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 170 bits (413), Expect = 6e-41
Identities = 100/272 (36%), Positives = 147/272 (54%), Gaps = 12/272 (4%)
Query: 110 FDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALS-GHDMVGIASTGSGKTLSYILPAIV 168
F G ++ ++ GF +P+PIQ Q P+ LS HD++G A TG+GKT ++ LP +
Sbjct: 4 FTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLPIVQ 63
Query: 169 HINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDL 228
I K P AL+L PTRELA Q+ E F I L+GGAP Q R L
Sbjct: 64 KIEPGLKK-----PQALILCPTRELAIQVNEEIKSFCKGRGITTVTLYGGAPIMDQKRAL 118
Query: 229 DAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 288
GV++V+ATPGR + F+E G+ L YLVLDEAD ML+MGF + K+++ DR
Sbjct: 119 KKGVDLVVATPGRCIHFIEDGKLELDSLEYLVLDEADEMLNMGFVEDVEKVLKASPDDRT 178
Query: 289 TLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIID-VCMEYEKETKLSTLL 347
LM+SAT P ++ +A ++ + + I S + ++ ID V E E K + L
Sbjct: 179 VLMFSATMPPRLKKIAESYMHNSITIKAKSETMT-----METIDQVVYEAYPENKFAALC 233
Query: 348 KEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
+ + EK+ IIF TK V+ ++ + +G
Sbjct: 234 RIMDLEKDFYGIIFCRTKVEVEKVSAGLANEG 265
>UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellular
organisms|Rep: ATP-dependent RNA helicase -
Bradyrhizobium japonicum
Length = 500
Score = 169 bits (412), Expect = 8e-41
Identities = 100/273 (36%), Positives = 148/273 (54%), Gaps = 5/273 (1%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
++F G + V+ + G+ PTPIQ Q P L+ D++GIA TG+GKT +++LP +
Sbjct: 1 MSFSNLGLSEKVLAAVAATGYTTPTPIQEQAIPHVLARKDVLGIAQTGTGKTAAFVLPML 60
Query: 168 VHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARD 227
+ + +R P L+L PTRELA Q++E D++ K++ L GG G Q
Sbjct: 61 TIL--EKGRARARMPRTLILEPTRELAAQVKENFDRYGAGQKLNVALLIGGVSFGDQDAK 118
Query: 228 LDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 287
L GV+++IATPGRLLD E G L LV+DEADRMLDMGF P I +I + + R
Sbjct: 119 LTRGVDVLIATPGRLLDHTERGGLLLTGVELLVIDEADRMLDMGFIPDIERICKLVPFTR 178
Query: 288 QTLMWSATWPREVQSLASEFLKDYLQINVGS-LQLAANHNILQIIDVCMEYEKETKLSTL 346
QTL ++AT P E++ + FL + ++ V A Q+ +EK L L
Sbjct: 179 QTLFFTATMPPEIRRITETFLHNPQKVEVSKPATTAVTVTQSQVPAGKKAHEKRELLRRL 238
Query: 347 LKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
L+E A+ IIF KR V + + +++ G
Sbjct: 239 LRE--AKDLKNAIIFCNRKREVAIVHKSLQKHG 269
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 169 bits (412), Expect = 8e-41
Identities = 99/261 (37%), Positives = 144/261 (55%), Gaps = 8/261 (3%)
Query: 119 VMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSR 178
++ + ++GF +PTPIQA P A+SG D++ A TGSGKT +++LP + + ++P+ +
Sbjct: 12 LLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQLIDRPRGTT 71
Query: 179 GDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIAT 238
ALV+ PTRELA QI E + A + I +FGG PQ GV+++I T
Sbjct: 72 R----ALVITPTRELAAQILEDLNDLAVHTPISAAAVFGGVSIRPQEHAFRRGVDVLIGT 127
Query: 239 PGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPR 298
PGRLLD + L +LVLDEADRMLDMGF P IR+I++ I RQTL +SAT P
Sbjct: 128 PGRLLDHFRAPYAKLAGLEHLVLDEADRMLDMGFLPDIRRILKHIPARRQTLFFSATMPA 187
Query: 299 EVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKT 358
+ LA E L++ +N+ + A I Q + + K L LLK +
Sbjct: 188 PIGVLAREMLRNPATVNINRIAAPA-AGITQAVYPVAQELKAALLVALLKR---DDIRDA 243
Query: 359 IIFIETKRRVDDITRKMKRDG 379
++F TK R + + + R G
Sbjct: 244 LVFTRTKHRANRLAEHLVRQG 264
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 169 bits (412), Expect = 8e-41
Identities = 91/271 (33%), Positives = 154/271 (56%), Gaps = 9/271 (3%)
Query: 109 TFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIV 168
TF++ D + ++ F PTP+Q + P AL G D++ A TG+GKTL++I+PA+
Sbjct: 28 TFNDMPLSDVLKQRLEAAQFINPTPVQEKAIPPALDGRDILATAQTGTGKTLAFIIPALE 87
Query: 169 HINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDL 228
+ + + G L+L PTRELA Q+ V ++ + GG + Q + +
Sbjct: 88 ML----RDTEPCGVQVLILVPTRELAMQVHGVYEQLKGKKLKSAALVMGGTSERNQIQSI 143
Query: 229 DAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 288
+G +V+ATPGRL D++ +L + LVLDEADRM+DMGF P I++I+ + D+Q
Sbjct: 144 RSGARVVVATPGRLEDYMGRRLVDLSQVEMLVLDEADRMMDMGFLPAIKRILRALPRDKQ 203
Query: 289 TLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLK 348
TL +SAT V + + L + +++ +GS+ A L I+V + +K+ L+
Sbjct: 204 TLCFSATMGPAVSGIVQDCLYNAVRVEIGSILKPAAAVELHAIEVPIMGKKDA-----LR 258
Query: 349 EIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
+++ E+E KT++F TKR + + +++ RDG
Sbjct: 259 QLLYEQEGKTLVFARTKRGTERLAKELIRDG 289
>UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2;
Theileria|Rep: RNA helicase, putative - Theileria
annulata
Length = 620
Score = 169 bits (412), Expect = 8e-41
Identities = 104/295 (35%), Positives = 160/295 (54%), Gaps = 16/295 (5%)
Query: 87 VEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGH 146
V++ R+ I + G +P P L F++ P ++ ++ +PT IQ Q P L G
Sbjct: 168 VDSIRNALLIDVSGDQVPPPILNFEDMKLPKPILKALNHKKIFEPTKIQMQALPSVLLGR 227
Query: 147 DMVGIASTGSGKTLSYILPAIVHI----NNQPKSSRGDGPIALVLAPTRELAQQIQEVCD 202
D++G++STG+GKTL +++P I+ P SR +GP LV+ P+RELA QI ++
Sbjct: 228 DVIGVSSTGTGKTLVFVIPMIMQSWEIELRLPIESR-EGPFGLVICPSRELASQISDITK 286
Query: 203 KFANT------SKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRC 256
F K++ +C+ GG Q + +GV +VIATPGRL FL S NL +C
Sbjct: 287 YFTGYIYNYGGPKLYCSCVIGGTDIKDQEFTIKSGVHMVIATPGRLNYFLNSRIINLTQC 346
Query: 257 TYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDYLQINV 316
YL DEADR +D+GF+ +I I QTL++SAT ++Q A L + + +NV
Sbjct: 347 RYLCFDEADRTIDLGFDTEINGIFNHFNNQHQTLLFSATMSIKIQEFAKSALTNPILVNV 406
Query: 317 GSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDI 371
G L + N N+ Q++ + KE+KL LL + + + +IF E K V+ I
Sbjct: 407 G-LPGSPNKNVKQLL---ILVPKESKLPMLL-QCLKKTPPPVLIFCENKADVEII 456
>UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n=6;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania infantum
Length = 924
Score = 169 bits (412), Expect = 8e-41
Identities = 103/285 (36%), Positives = 158/285 (55%), Gaps = 18/285 (6%)
Query: 105 KPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYIL 164
KP F + + I++ G+ KPTP+Q G P+ALSG D++ A TGSGKT ++++
Sbjct: 469 KPVEDFADLLVEPALAANIERCGYKKPTPVQRYGIPVALSGSDLMACAQTGSGKTAAFLI 528
Query: 165 PAIVHI---NNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPK 221
P + ++ P R PIALVLAPTRELA QI + K + I ++GG +
Sbjct: 529 PVVQYMLVHGVSPARQRKSYPIALVLAPTRELAVQIFDEVRKLTFNTDIFYDVVYGGT-R 587
Query: 222 GPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIE 281
PQ + D I++A PGRL D + +L+LDEADRML+MGFE QI +++
Sbjct: 588 YPQRFEQD----ILVACPGRLRDMFNEEYLSFSAIKFLILDEADRMLEMGFEEQIEELVA 643
Query: 282 QIRPD------RQTLMWSATWPREVQSLASEFL-KDYLQINVGSLQLAANHNILQIIDVC 334
D RQT M+SAT+P+ + +LA +L + Y + VG + + NI Q I+
Sbjct: 644 SRYTDMPTVDERQTFMFSATFPQRILNLAKRYLRRKYYLLTVGRVG-STTKNITQTIEHV 702
Query: 335 MEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
+ EK +L ++ E + +IF+ETK+ +D+ R++ R+G
Sbjct: 703 PDNEKMDRLLQII--YGHEMSDMVLIFVETKKMAEDVNRRLHREG 745
>UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=3; Saccharomycetales|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 597
Score = 169 bits (412), Expect = 8e-41
Identities = 111/322 (34%), Positives = 165/322 (51%), Gaps = 34/322 (10%)
Query: 90 WRSENE---ITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGH 146
WR NE IT KG+ IP T ++DE+G ++ + GF +PTP+Q PI+L
Sbjct: 164 WRIFNEDYGITTKGKKIPHATRSWDESGLDPKILASLKSFGFRQPTPVQRASIPISLELR 223
Query: 147 DMVGIASTGSGKTLSYILPAIVHI-----NNQPKSSRGDGPIALVLAPTRELAQQIQEVC 201
D+VG+A TGSGKTL+++LP + ++ N + P+ALVLAPTRELA QI +
Sbjct: 224 DVVGVAETGSGKTLAFLLPLLHYLSRVDGNYLNYEKVRNEPLALVLAPTRELALQITQEA 283
Query: 202 DKFANTSKIHNTCLFGGAPKGPQARDLD-----AGVEIVIATPGRLLDFLESGRTNLKRC 256
+KF + + GG +D GV IV+ TPGRLLD +E N +C
Sbjct: 284 EKFGKQLGFNVLSIIGGRQYQETMDQIDNMIVGRGVHIVVGTPGRLLDSVERKILNFSKC 343
Query: 257 TYLVLDEADRMLDMGFEPQIRKIIEQIRPD----------------RQTLMWSATWPREV 300
YLV+DEADRM+DMGFE + K+I + + R T+M++AT +
Sbjct: 344 YYLVMDEADRMIDMGFEKDLNKLINLLPKNEKLSTTIDGKLFHLTKRLTMMYTATISPPI 403
Query: 301 QSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENK--- 357
+ + +L D I +G A + NI Q D Y + +LS L+K + K
Sbjct: 404 EKITKSYLIDPAYIYIGGAGEALD-NIDQHFDYLSTYAESARLSKLIKVVQGHKRRNRNA 462
Query: 358 -TIIFIETKRRVDDITRKMKRD 378
IIF K D ++ +++++
Sbjct: 463 LVIIFANFKHVCDVLSLELEQN 484
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 169 bits (411), Expect = 1e-40
Identities = 93/271 (34%), Positives = 148/271 (54%), Gaps = 4/271 (1%)
Query: 109 TFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIV 168
TFD G + + + ++ PTPIQ + P AL+G DM+GIA TG+GKT ++ LP +
Sbjct: 5 TFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALPLLH 64
Query: 169 HINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDL 228
H+ AL+L+PTRELA QI E + + I + +FGG PQ + L
Sbjct: 65 HLMTVGGKPTTRTTKALILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVRPQIQAL 124
Query: 229 DAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 288
GV+I++ATPGRLLD +E +L+ +L+LDEADRMLDMGF + KI+ + DRQ
Sbjct: 125 ARGVDILVATPGRLLDLMEQRAIDLRETRHLILDEADRMLDMGFVRDVMKIVGKCPDDRQ 184
Query: 289 TLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLK 348
++M+SAT P+ ++ L+ + L + +++V A + +I + K L+
Sbjct: 185 SMMFSATMPKPIEDLSKKILTNPQKVSV----TPAVVTVEKIAQSVFSVPQRAKKHWLID 240
Query: 349 EIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
+ + ++F TK + +T + + G
Sbjct: 241 FVSKNDTGRIVVFTRTKHGANRLTSDLDKAG 271
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 169 bits (411), Expect = 1e-40
Identities = 98/272 (36%), Positives = 146/272 (53%), Gaps = 9/272 (3%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
++FD F + I +G+ PTPIQ Q P AL G D++GIA TG+GKT +++LP +
Sbjct: 1 MSFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPIL 60
Query: 168 VHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARD 227
+ P+ A+++ PTRELA+QIQ V + + + + L+GG Q +
Sbjct: 61 QRLMRGPRGRVR----AMIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGGVGYQGQIQR 116
Query: 228 LDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 287
L GVEI + PGRLLD LE G L+ L+LDEAD+M DMGF P +R+I+ R
Sbjct: 117 LRRGVEIAVVCPGRLLDHLERGTLTLEHLDMLILDEADQMFDMGFLPDVRRILRLAPAQR 176
Query: 288 QTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLL 347
QT+++SAT P +++LA E L++ I +G + A + I E+ K L LL
Sbjct: 177 QTMLFSATMPDAIRALAREALREPQTIQIG--RSAPVSTVTHAIYPVAEHLKTALLIELL 234
Query: 348 KEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
+ +IF TK R ++ + R G
Sbjct: 235 RH---TDTGSVLIFTRTKHRAQHLSDTLARMG 263
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 169 bits (410), Expect = 1e-40
Identities = 101/280 (36%), Positives = 155/280 (55%), Gaps = 13/280 (4%)
Query: 107 TLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPA 166
T+TF G P+ ++ + MGF PTPIQA P L D+VGIA TG+GKT ++ LP
Sbjct: 44 TVTFASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGIAQTGTGKTAAFGLPL 103
Query: 167 IVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFA-NTSKIHNTCLFGGAPKGPQA 225
+ ++ ++ + ALVLAPTRELA Q + + FA T+++ ++GG+P GPQ
Sbjct: 104 LAIVDADERNVQ-----ALVLAPTRELAMQSAQAIEDFAARTARLDVVPVYGGSPYGPQI 158
Query: 226 RDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP 285
L G ++V+ TPGR++D +E G +L LVLDEAD ML MGF + I
Sbjct: 159 GALKRGAQVVVGTPGRVIDLIEKGALDLSHVRMLVLDEADEMLRMGFAEDVETIASSAPD 218
Query: 286 DRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLST 345
DR T ++SAT P ++ +A E LKD +++ V S + + I Q V K LS
Sbjct: 219 DRLTALFSATMPAAIEKVAREHLKDPVKVAV-STESSTVDTIHQTYAVVPYKHKIGALSR 277
Query: 346 LL----KEIM--AEKENKTIIFIETKRRVDDITRKMKRDG 379
+L + I E+ + I+F+ T+ V++++ ++ G
Sbjct: 278 VLATRAQHIKEGQEEADAAIVFVRTRADVEEVSLELSSRG 317
>UniRef50_A2EPC6 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Trichomonas vaginalis G3|Rep: Type
III restriction enzyme, res subunit family protein -
Trichomonas vaginalis G3
Length = 505
Score = 169 bits (410), Expect = 1e-40
Identities = 103/315 (32%), Positives = 175/315 (55%), Gaps = 16/315 (5%)
Query: 67 PFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDK- 125
PFK++ L ++D E +++ NEI + G I P L+F+ ++ K
Sbjct: 75 PFKRNTTFEQLKDYYLDKADEEEYKAINEIKVIGCEI-SPVLSFEPYIENRPELENFFKD 133
Query: 126 MGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIAL 185
KPTP+QAQ PIA++G++++ ++ TG+GKTL +++P + H+ Q K +GP AL
Sbjct: 134 HSINKPTPVQAQVLPIAINGNNLIVVSPTGTGKTLCFLIPLLYHVLAQGKQ---EGPTAL 190
Query: 186 VLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDF 245
+L+PT LA+Q VC + ++ I L G K Q L G +++I TPGRL++F
Sbjct: 191 ILSPTELLARQTTLVCHQLIKSTDIKCVELTGNQMKHKQQSSLMKGADVIIGTPGRLMNF 250
Query: 246 LESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLAS 305
L++ N + CTY+V+DEADR+ + GF Q+R I++ IRPDRQTL++ AT P +++ L+
Sbjct: 251 LKT--VNWQFCTYVVVDEADRIFETGFLRQLRSIMDYIRPDRQTLLFGATLPPQIEELSM 308
Query: 306 EFLKDYLQINVGSL---QLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFI 362
LK ++ +G Q HN + I D + K + + ++ + ++F+
Sbjct: 309 NSLKFSTRVQIGKTGAPQSNIEHNFV-IFD-----DPAKKREWIKENLLKLPDGLVLLFV 362
Query: 363 ETKRRVDDITRKMKR 377
+ K D + +K+
Sbjct: 363 KDKNFCDTLYGILKK 377
>UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 738
Score = 169 bits (410), Expect = 1e-40
Identities = 102/325 (31%), Positives = 174/325 (53%), Gaps = 26/325 (8%)
Query: 79 VEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQG 138
+++ E D +R + I +G IP P + E+ P ++D I+++G+ +P+PIQ Q
Sbjct: 286 LDEMKERDWRIFREDFSIAARGGGIPHPLRNWRESAIPSQILDIIEEIGYKEPSPIQRQA 345
Query: 139 WPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPK---SSRGDGPIALVLAPTRELAQ 195
PI + D++G+A TGSGKT ++++P + +I + P +R GP AL++APTRELAQ
Sbjct: 346 IPIGMQNRDLIGVAKTGSGKTAAFVIPMLDYIGHLPPLNDDNRHLGPYALIMAPTRELAQ 405
Query: 196 QIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKR 255
QI+ +FA + GG Q L G EI+IATPGRL D ++ + +
Sbjct: 406 QIETETRRFALPLGYKCVSIVGGRSVEEQQFALRDGAEIIIATPGRLKDMVDKSILVMSQ 465
Query: 256 CTYLVLDEADRMLDMGFEPQIRKIIEQ-----IRPD----------------RQTLMWSA 294
C Y+V+DEADRM+D+GFE + I++ ++PD R T ++SA
Sbjct: 466 CRYVVMDEADRMVDLGFEVDLNFILDSMPATFVKPDDSVALQPTKEGEWQGWRVTTLFSA 525
Query: 295 TWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEK 354
T P V+ LA ++L + +G+ A + ++ V + +K+ +L +L+ I
Sbjct: 526 TMPPAVERLARKYLIKPATVVIGNAGEAVDTVEQRVEFVHGDEKKKARLIEILRTIGLPP 585
Query: 355 ENKTIIFIETKRRVDDITRKMKRDG 379
I+F+ K+ D + + +++ G
Sbjct: 586 --PIIVFVNQKKTADMVVKYVQQAG 608
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 168 bits (409), Expect = 2e-40
Identities = 101/277 (36%), Positives = 151/277 (54%), Gaps = 8/277 (2%)
Query: 103 IPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSY 162
+P +L F A P ++ DK G+ PT IQ+Q P L G D+VG A TGSGKT ++
Sbjct: 1 MPFSSLGFSPALLPAFLRAIGDK-GYRAPTAIQSQAIPAILLGRDVVGSAQTGSGKTAAF 59
Query: 163 ILPAIVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFAN--TSKIHNTCLFGGAP 220
LP + + N P + L+L PTRELA Q+ E FA ++ +FGG
Sbjct: 60 ALPMLQQLANAPTGTPRPTR-GLILVPTRELAAQVGEAIAGFAKYLPQRVKVAVVFGGVS 118
Query: 221 KGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKII 280
PQ +L G +IV+ATPGRLLD LE + + LVLDEADR+LD+GF ++ +I+
Sbjct: 119 INPQMMNLRGGADIVVATPGRLLDLLEHNALKISEVSTLVLDEADRLLDLGFGEELGRIL 178
Query: 281 EQIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKE 340
E + P RQ L +SAT+P ++ LA L D L+I V ++ + I V + +
Sbjct: 179 ELLPPRRQNLFFSATFPPAIEVLAESMLHDPLRIEVQAVPETKPDIAQRAIQV--DASRR 236
Query: 341 TKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKR 377
T+L L + EK + ++F+ TK + + K+++
Sbjct: 237 TQL--LRHLVQTEKWERALVFVATKHAAEIVADKLRK 271
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 168 bits (409), Expect = 2e-40
Identities = 95/268 (35%), Positives = 148/268 (55%), Gaps = 5/268 (1%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
++F G + + + G+ P+PIQAQ P L+G D++ A TG+GKT + LP +
Sbjct: 1 MSFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLL 60
Query: 168 VHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARD 227
++ K+ G ALVL PTRELA Q+ E + + + + +FGG P PQ +
Sbjct: 61 ELLSKGNKAKAGQIR-ALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQK 119
Query: 228 LDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 287
L GV++++ATPGRLLD ++ + LVLDEADRMLDMGF I+KI+ + R
Sbjct: 120 LRHGVDVLVATPGRLLDLVQQNVVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKR 179
Query: 288 QTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLL 347
Q LM+SAT+ E++ LA + ++I+V AAN + Q I C +K K + L+
Sbjct: 180 QNLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAAN-TVKQWI--C-PVDKNQKSALLI 235
Query: 348 KEIMAEKENKTIIFIETKRRVDDITRKM 375
+ I E + ++F TK + + + +
Sbjct: 236 QLIKQEDWQQVLVFSRTKHGANRLAKSL 263
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 168 bits (409), Expect = 2e-40
Identities = 95/268 (35%), Positives = 147/268 (54%), Gaps = 5/268 (1%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
++F G + + + G+ P+PIQAQ P L+G D++ A TG+GKT + LP +
Sbjct: 1 MSFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLL 60
Query: 168 VHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARD 227
++ K+ G ALVL PTRELA Q+ E + + + + +FGG P PQ +
Sbjct: 61 ELLSKGNKAKAGQIR-ALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQK 119
Query: 228 LDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 287
L GV++++ATPGRLLD + + LVLDEADRMLDMGF I+KI+ + R
Sbjct: 120 LRHGVDVLVATPGRLLDLEQQKAVKFNQLEVLVLDEADRMLDMGFIRDIKKILAMLPAKR 179
Query: 288 QTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLL 347
Q LM+SAT+ E++ LA + ++I+V AAN + Q I C +K K + L+
Sbjct: 180 QNLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAAN-TVKQWI--C-PVDKNQKSALLI 235
Query: 348 KEIMAEKENKTIIFIETKRRVDDITRKM 375
+ I E + ++F TK + + + +
Sbjct: 236 QLIKQEDWQQVLVFSRTKHGANRLAKSL 263
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 168 bits (408), Expect = 2e-40
Identities = 95/267 (35%), Positives = 154/267 (57%), Gaps = 9/267 (3%)
Query: 110 FDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALS-GHDMVGIASTGSGKTLSYILPAIV 168
F++ G + ++ I K G+ KPT IQ P ALS D++ A TG+GKT ++ +P +
Sbjct: 20 FEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQTGTGKTAAFGIPLLE 79
Query: 169 HINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDL 228
I+ + A+++ PTRELA QI E T ++ T L+GG Q +DL
Sbjct: 80 RIDFKANKFVK----AIIVTPTRELALQIFEELKSLKGTKRVKITTLYGGQSLEKQFKDL 135
Query: 229 DAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 288
+ GV+IV+ TPGR++D L +L YLVLDEADRMLDMGF + +II++ +++
Sbjct: 136 EKGVDIVVGTPGRIIDHLNRDTLDLSHVEYLVLDEADRMLDMGFLDDVLEIIKRTGENKR 195
Query: 289 TLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLK 348
T ++SAT P+E+ +A +F+K+Y+ ++ +L N Q+ E +++ KL L +
Sbjct: 196 TFLFSATMPKEIVDIARKFMKEYIHVSTVKDEL-TTENAEQLY---FEVDEKDKLPLLCR 251
Query: 349 EIMAEKENKTIIFIETKRRVDDITRKM 375
I + I+F +TK VD+I++K+
Sbjct: 252 IIDMNPDFYGIVFCQTKLEVDEISKKL 278
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 168 bits (408), Expect = 2e-40
Identities = 97/273 (35%), Positives = 153/273 (56%), Gaps = 8/273 (2%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
+TF E G ++ + ++G+ KP+PIQ + P AL+G D++G A TG+GKT ++ P +
Sbjct: 1 MTFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPIL 60
Query: 168 VHINNQPKSSRGDGPI-ALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQAR 226
+ + R PI +L+L PTRELA QIQE + + + + +FGG + PQ
Sbjct: 61 QRLGGDIPAGR---PIRSLILTPTRELALQIQESFEAYGKHLPLRSAVIFGGVGQQPQVD 117
Query: 227 DLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD 286
L GV+I++ATPGRLLD G +L R VLDEADRMLDMGF +R++++ +
Sbjct: 118 KLKKGVDILVATPGRLLDLQGQGFVDLSRLEIFVLDEADRMLDMGFLHDVRRVLKLLPAV 177
Query: 287 RQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTL 346
+QTL +SAT P EV L + LK+ +++ V +++ I+ ++ +TKL
Sbjct: 178 KQTLFFSATMPPEVMDLVNGLLKNPVKVAVD--PVSSPVEIIDQSVYLVDKGNKTKLLAW 235
Query: 347 LKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
L E + K I+F TK + + + + G
Sbjct: 236 LVEGLDVK--NAIVFTRTKHGANKVAGDLVKAG 266
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 167 bits (407), Expect = 3e-40
Identities = 95/273 (34%), Positives = 148/273 (54%), Gaps = 10/273 (3%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
L+F++ P V+++++ M F PTPIQ Q P L G D++G A TG+GKT ++ LPA+
Sbjct: 8 LSFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEGQDVLGEAQTGTGKTAAFGLPAL 67
Query: 168 VHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSK-IHNTCLFGGAPKGPQAR 226
I+ K ++ LV+ PTRELA Q+ E + FA + + ++GGAP GPQ +
Sbjct: 68 AKIDASVKQTQ-----VLVVTPTRELAIQVAEALEGFAAKMRGVGVATVYGGAPFGPQVK 122
Query: 227 DLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD 286
L G IV+ TPGRL+D L L VLDEAD ML+MGF I I++ +
Sbjct: 123 ALKQGTAIVVGTPGRLIDLLNKNVLQLDGLKVGVLDEADEMLNMGFIEDIETILKAVPNT 182
Query: 287 RQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTL 346
Q ++SAT P ++ LA FLKD L I + ++ I + + TK++ L
Sbjct: 183 AQRALFSATMPNAIRKLAKTFLKDPLNIQIEAIA----REKATIKQKAWKVQGMTKMTAL 238
Query: 347 LKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
+ + + +IF+ T++ D+ ++R+G
Sbjct: 239 TRLLEVTPYQRALIFVRTRQDTMDVAELLQRNG 271
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 167 bits (407), Expect = 3e-40
Identities = 98/274 (35%), Positives = 144/274 (52%), Gaps = 10/274 (3%)
Query: 107 TLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPA 166
T TF E + ++ I MGF +PTPIQA P L G D+ G A TG+GKT ++ +P
Sbjct: 4 TKTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGIPI 63
Query: 167 IVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTC-LFGGAPKGPQA 225
I ++ K+ + ALVL+PTRELA Q E + K N ++GG P Q
Sbjct: 64 IERLDPDNKNVQ-----ALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPIERQL 118
Query: 226 RDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP 285
R L V++VI TPGR++D ++ G +L T +LDEAD+MLDMGF I I
Sbjct: 119 RALKGTVQVVIGTPGRVIDHIKRGTLHLDSVTMFILDEADQMLDMGFREDIEDIFRDTPK 178
Query: 286 DRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLST 345
DRQT+++SAT P+ + + F +D + + +L + QI +E + KL
Sbjct: 179 DRQTILFSATMPQPILDITRRFQRDPQFVKITRKEL----TVPQIEQTYIEVRERDKLEA 234
Query: 346 LLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
L + + ++F TKR VDD+ +M+ G
Sbjct: 235 LCRTLDMNNPELALVFCNTKRTVDDLMSRMQARG 268
>UniRef50_Q9W3Y5 Cluster: Putative ATP-dependent RNA helicase
CG14443; n=1; Drosophila melanogaster|Rep: Putative
ATP-dependent RNA helicase CG14443 - Drosophila
melanogaster (Fruit fly)
Length = 438
Score = 167 bits (407), Expect = 3e-40
Identities = 95/292 (32%), Positives = 162/292 (55%), Gaps = 15/292 (5%)
Query: 90 WRSENEITLKG---RNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGH 146
+R + ITL RN+P+P L+F+ +GF ++ +++ G+ PTPIQAQ W IA G
Sbjct: 11 YRKRHNITLTSWNMRNLPEPVLSFERSGFNATILQQLEDQGYDGPTPIQAQTWSIAKEGK 70
Query: 147 DMVGIASTGSGKTLSYILPAIVHINNQ-PKSSRGDGPIALVLAPTRELAQQIQEVCDKFA 205
++V I+ G+GKTL Y+LP I+ ++NQ GPI L+L RE A +Q +
Sbjct: 71 NIVMISGKGTGKTLGYLLPGIMKMHNQRGLMQHKKGPIVLILVDCREAAVMVQREVLYYT 130
Query: 206 NTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGR--TNLKRCTYLVLDE 263
N ++ CL G + A ++++A+ GRLL +++ + L+RCTYLVLD
Sbjct: 131 NPLELRTHCLLGNSQWQGHAE-----CDLLVASAGRLLQMIDNKKHVVELERCTYLVLDN 185
Query: 264 ADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQL-- 321
DRM+D+G E I +++ ++RP Q ++ S +W ++ +A++FL Y I VG +
Sbjct: 186 IDRMIDVGLEGNICRLLCRLRPHAQLIVSSTSWSSNLKRMANKFLGQYTAIRVGEINNIG 245
Query: 322 AANHNILQIIDVCMEYEKETKLSTLLKEI--MAEKENKTIIFIETKRRVDDI 371
NI Q ++V K +L L I ++ K +I+++ ++ V+++
Sbjct: 246 VRLQNIRQRVEVVNGLSKVERLMKELTAIYDTSDIPGKVVIYVKRQKVVEEL 297
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 167 bits (406), Expect = 4e-40
Identities = 98/273 (35%), Positives = 144/273 (52%), Gaps = 5/273 (1%)
Query: 101 RNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTL 160
+N TLTF++ + I + G+ PTPIQA P L G D++ A TG+GKT
Sbjct: 17 KNDNNNTLTFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDIMASAQTGTGKTA 76
Query: 161 SYILPAIVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAP 220
++ILP I + + K R +LVL PTRELA Q++ + + + +FGG
Sbjct: 77 AFILPIIELLRAEDKPKRYQVH-SLVLTPTRELAAQVEASAKAYTKYLALRSDAVFGGVS 135
Query: 221 KGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKII 280
PQ + L GV+I++ATPGRLLD + LVLDEADRMLDMGF I+K+I
Sbjct: 136 IRPQVKRLQGGVDILVATPGRLLDLINQKMIRFDNLKVLVLDEADRMLDMGFIRDIKKVI 195
Query: 281 EQIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKE 340
E + +RQ +M+SAT+ ++ LA L D ++I S+Q A I ++ C +
Sbjct: 196 EYLPKNRQNMMFSATFSTPIKKLALGLLNDPVEIK-ASVQNQAAPTIEHLVHPC---DMA 251
Query: 341 TKLSTLLKEIMAEKENKTIIFIETKRRVDDITR 373
K+ L I K + ++F TK D + +
Sbjct: 252 RKVDLLCHLIKTNKWKQVLVFARTKHGADKVVK 284
>UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10;
Rickettsia|Rep: ATP-dependent RNA helicase RhlE -
Rickettsia conorii
Length = 414
Score = 167 bits (405), Expect = 6e-40
Identities = 93/254 (36%), Positives = 142/254 (55%), Gaps = 12/254 (4%)
Query: 123 IDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGP 182
++ M +PT IQ Q P+A++G D++ + TGSGKTL+Y+LP I S +
Sbjct: 18 LETMNITEPTEIQKQSIPVAMAGSDILASSQTGSGKTLAYLLPLI-------DSFIKNKT 70
Query: 183 IALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRL 242
AL+L PTRELA QI +K + KI++ L GG P Q L +++I TPGR+
Sbjct: 71 TALILVPTRELATQIHSTLNKVTTSYKINSAVLIGGEPMPKQFIQLKKNPKVIIGTPGRI 130
Query: 243 LDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQS 302
+D L G + R VLDE DRMLDMG + Q+ +I + + RQ LM+SAT P+ + +
Sbjct: 131 IDHLNRGSLKIDRIGITVLDEMDRMLDMGMKEQLEEINKFLPEKRQVLMFSATMPKHIIA 190
Query: 303 LASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFI 362
++ ++L + ++I VG A N +I M + K S L K+ + +E IIF+
Sbjct: 191 VSQKYLNNPVRITVG----ATNKAAAEIKQESMHVSDKEKFSALTKQ-LGNREGSVIIFV 245
Query: 363 ETKRRVDDITRKMK 376
+TKR D + + +K
Sbjct: 246 KTKRSADQLAKMLK 259
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 167 bits (405), Expect = 6e-40
Identities = 103/277 (37%), Positives = 146/277 (52%), Gaps = 7/277 (2%)
Query: 106 PTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILP 165
P TF + V I + G+ PTPIQA P AL+G D++GIA TG+GKT S+ LP
Sbjct: 9 PMTTFADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGKTASFTLP 68
Query: 166 AIVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQA 225
I + +R P +LVL PTRELA Q+ E D +A K+ L GG Q
Sbjct: 69 MITMLARG--RARARMPRSLVLCPTRELAAQVAENFDIYAKHVKLTKALLIGGVSFKEQE 126
Query: 226 RDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP 285
+ +D GV+++IATPGRLLD E G+ L +V+DEADRMLDMGF P I +I +
Sbjct: 127 QAIDKGVDVLIATPGRLLDHFERGKLILNDVKVMVVDEADRMLDMGFIPDIERIFGLVPF 186
Query: 286 DRQTLMWSATWPREVQSLASEFLKDYLQINV---GSLQLAANHNILQIIDVCMEYEKETK 342
RQTL +SAT E++ + + FL + +I V + +++ + + + K
Sbjct: 187 TRQTLFFSATMAPEIERITNTFLSNPEKIEVERQSTTSATIEQRLIEFKAPRRDAQAKMK 246
Query: 343 LSTLLKEIMAEKE--NKTIIFIETKRRVDDITRKMKR 377
L I AE + IIF K VD + + +K+
Sbjct: 247 RDMLRAAITAEGDAFRNAIIFCNRKVDVDIVAKSLKK 283
>UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=6;
Actinomycetales|Rep: Possible ATP-dependent RNA helicase
- Rhodococcus sp. (strain RHA1)
Length = 632
Score = 167 bits (405), Expect = 6e-40
Identities = 101/275 (36%), Positives = 150/275 (54%), Gaps = 10/275 (3%)
Query: 107 TLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPA 166
T+TF E G P ++ + + P+PIQA P AL+G +++G A TGSGKTL++ LP
Sbjct: 25 TVTFAEIGLPAPLVQALARNSITVPSPIQALAVPDALAGTNVLGRAQTGSGKTLAFGLPM 84
Query: 167 IVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQAR 226
+ ++ P ALVL PTRELA Q+ + + +A + GG P Q
Sbjct: 85 LTRLSRHEDRPAPKRPRALVLVPTRELAFQVVDSLNSYAGAMGLTVRPAVGGTPFSKQVD 144
Query: 227 DLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD 286
L GV+I++ATPGRL D L G L LDEAD+M DMGF P++R I+ + R D
Sbjct: 145 QLRRGVDILVATPGRLNDHLRQGTCILDSIEITALDEADQMADMGFLPEVRAILGETRAD 204
Query: 287 RQTLMWSATWPREVQSLASEFLKDYLQINV--GSLQLAANHNILQIIDVCMEYEKETKLS 344
Q L++SAT REVQSL +FL D++Q + G + + + ++D +
Sbjct: 205 GQRLLFSATLDREVQSLVRQFLPDHVQHSTEDGRASVDTMEHYVLLVD-------RGQKD 257
Query: 345 TLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
+L EI A ++ +TI+F TK + IT +++ G
Sbjct: 258 NVLAEIGA-RDGRTIMFARTKLGCEGITDRLRAVG 291
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 167 bits (405), Expect = 6e-40
Identities = 98/281 (34%), Positives = 159/281 (56%), Gaps = 13/281 (4%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
++F + +++ + ++ + +PTPIQ Q P+ LSG D++ A TG+GKT ++ LP +
Sbjct: 1 MSFADLSLHPILINRLAELKYQQPTPIQLQAIPVILSGKDVMAGAQTGTGKTAAFALPLL 60
Query: 168 ----VHINN---QPKSSR-GDGPI-ALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGG 218
H +N QP + PI ALVL PTRELAQQ+ +++A S + + ++GG
Sbjct: 61 HQLLTHQDNLAAQPDTQHINSTPITALVLVPTRELAQQVHSSIEQYAYGSSVTSVMVYGG 120
Query: 219 APKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRK 278
G Q R L G I++ATPGRLLD L +L + T+LV DEADRMLDMGF+ +I +
Sbjct: 121 VSIGEQIRQLANGTHILVATPGRLLDLLRKRALSLSQLTHLVFDEADRMLDMGFKDEIVE 180
Query: 279 IIEQIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYE 338
+++++ RQTL++SAT + S + L+ I V A+ + ++ +V +
Sbjct: 181 VLKRLPSTRQTLLFSATLDDRMLSFSRRLLRSPQVIEVAQRNTTASSIVERVFNV----D 236
Query: 339 KETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
K + L I E +++IF TK+ D + ++MK+ G
Sbjct: 237 ANRKCAMLCHLITQESWLQSLIFSRTKQGADALVKQMKQAG 277
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 167 bits (405), Expect = 6e-40
Identities = 97/275 (35%), Positives = 155/275 (56%), Gaps = 15/275 (5%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
++F+ F VM + G+ +PTPIQAQ P ++GHD++G+A TG+GKT +Y LP I
Sbjct: 1 MSFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPII 60
Query: 168 VHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARD 227
+ + P+ LV+APTRELA QI + ++I ++GG Q R
Sbjct: 61 QKMLSTPRGRVR----TLVIAPTRELACQISDSFRSLGQRARIRECSIYGGVNMDQQIRR 116
Query: 228 LDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 287
L +GV++V+A PGRLLD + G ++ L++DEADRM DMGF+P I+ I++ +
Sbjct: 117 LRSGVDVVVACPGRLLDHIWRGTIDVCGVETLIIDEADRMFDMGFQPDIQSILKCLVQPH 176
Query: 288 QTLMWSATWPREVQSLASEFLKDYLQINVG--SLQLAANHNILQIIDVCMEYEKETKLST 345
QTL++SAT P EV+ L E + + + VG S + +H++ + K + +
Sbjct: 177 QTLLFSATMPPEVRKLTLETQTNPVTVQVGTQSPVSSVSHSVYPV--------KSHQKTP 228
Query: 346 LLKEIMAEKENKTI-IFIETKRRVDDITRKMKRDG 379
LL EI+ E K++ IF TK +++ ++ + G
Sbjct: 229 LLLEILKTVETKSVLIFARTKYGAENLADEISKAG 263
>UniRef50_Q5ENJ0 Cluster: Chloroplast RNA helicase; n=1; Heterocapsa
triquetra|Rep: Chloroplast RNA helicase - Heterocapsa
triquetra (Dinoflagellate)
Length = 324
Score = 167 bits (405), Expect = 6e-40
Identities = 87/212 (41%), Positives = 130/212 (61%), Gaps = 8/212 (3%)
Query: 109 TFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIV 168
TF++A FP + E+ + GF P+ IQ WP+A D +G+A+TGSGKTL+++LP +
Sbjct: 107 TFEQAPFPQSIKAELQRAGFPAPSQIQQYTWPLAAQMRDTIGVAATGSGKTLAFLLPGMA 166
Query: 169 HINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAP-KGPQ--- 224
H+ Q G P LVLAPTREL QI ++FA ++ FGG +G Q
Sbjct: 167 HVAAQV----GTEPRMLVLAPTRELVMQIATEAEQFALGFRLRLGLAFGGQDGEGDQMMQ 222
Query: 225 ARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIR 284
+R L GV++++ TPGRL F E+ L+ +YLV+DEAD+ML GFEPQI++++
Sbjct: 223 SRVLRRGVDVLVGTPGRLTKFAEASVVYLREVSYLVIDEADQMLTDGFEPQIQEVLALTH 282
Query: 285 PDRQTLMWSATWPREVQSLASEFLKDYLQINV 316
P+RQ ++SATWP V++ A+ + ++I V
Sbjct: 283 PNRQVSLFSATWPPAVEAFAASVVDQPVRIVV 314
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 166 bits (404), Expect = 7e-40
Identities = 96/273 (35%), Positives = 146/273 (53%), Gaps = 5/273 (1%)
Query: 110 FDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVH 169
F + G V+ +D G++ PTPIQ Q P L G D++GIA TG+GKT +++LP+I
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSIDR 63
Query: 170 INNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLD 229
+ LVLAPTREL QI + + + + GG L
Sbjct: 64 LREADNRIPFKSCRMLVLAPTRELVSQIAASAKDYGALAGLKVQSIVGGTSVNKDRNKLH 123
Query: 230 AGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQT 289
G +I+IATPGRLLD ++ NL LVLDEAD+MLD+GF +R+I + + +RQT
Sbjct: 124 RGTDILIATPGRLLDLIDQKAFNLGSVEVLVLDEADQMLDLGFVHALRRISQLVPKERQT 183
Query: 290 LMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLK- 348
L +SAT P+ ++ L S + + +Q++V A I Q + + + EK++ L +L
Sbjct: 184 LFFSATMPKAIKELVSGYCNNPVQVSVTPESTTA-ERIDQYLFMVQQDEKQSLLELILSG 242
Query: 349 --EIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
++ E E + +IF TK D + +K+ R G
Sbjct: 243 RHKVPGEFE-RILIFTRTKHGADRVVKKLSRAG 274
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 166 bits (404), Expect = 7e-40
Identities = 93/273 (34%), Positives = 147/273 (53%), Gaps = 9/273 (3%)
Query: 107 TLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPA 166
T+TF + +M I++MGF + TPIQAQ P+ LS D++G A TG+GKT ++ +P
Sbjct: 2 TITFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPL 61
Query: 167 IVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQAR 226
+ IN + + + A+V+APTRELA Q+ E K + ++GG G Q R
Sbjct: 62 VEKINPESPNIQ-----AIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIR 116
Query: 227 DLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD 286
L I++ TPGRLLD + L +V+DEAD ML+MGF I I+ + +
Sbjct: 117 ALKKNPNIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSE 176
Query: 287 RQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTL 346
QTL++SAT P ++ +A F+ + + V + ++ + NI Q +E ++ K TL
Sbjct: 177 HQTLLFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVS-NIQQFY---LEVQERKKFDTL 232
Query: 347 LKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
+ + + I+F TKRRVD++ + G
Sbjct: 233 TRLLDIQSPELAIVFGRTKRRVDELAEALNLRG 265
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 165 bits (402), Expect = 1e-39
Identities = 99/271 (36%), Positives = 149/271 (54%), Gaps = 8/271 (2%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
++F G ++ ++K + P PIQ Q P L G D++GIA TGSGKT S++LP +
Sbjct: 9 MSFATLGLSPAILKALEKQFYNAPYPIQEQAIPAILKGKDILGIAQTGSGKTASFVLPIL 68
Query: 168 VHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANT--SKIHNTCLFGGAPKGPQA 225
+ +P + ALVL PTRELA Q+ +V F+N +KI + ++GG PQ
Sbjct: 69 QMLQTKPLG-KNRHINALVLVPTRELAVQVGQVFQAFSNALPNKIKSLAVYGGVSINPQM 127
Query: 226 RDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP 285
L GVEI+IATPGRLLD ++S L LVLDEAD+ML++GF+ ++ I + +
Sbjct: 128 IQLQ-GVEILIATPGRLLDLVDSKAVYLSDVEVLVLDEADKMLNLGFKEEMANIFKLLPQ 186
Query: 286 DRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLST 345
RQ L++SAT ++V ++ L D ++I + +A NI I + E K
Sbjct: 187 KRQNLLFSATLGKDVDTITEFLLHDPVKIEI----IAEEQNIDLIQQIAYAVEDARKGPL 242
Query: 346 LLKEIMAEKENKTIIFIETKRRVDDITRKMK 376
L I +K N+ +IF + R D + K+K
Sbjct: 243 LRYLIKEQKMNQVLIFTSSVHRADAVVEKLK 273
>UniRef50_Q5CWD0 Cluster: Prp5p C terminal KH. eIF4A-1-family RNA
SFII helicase; n=2; Cryptosporidium|Rep: Prp5p C
terminal KH. eIF4A-1-family RNA SFII helicase -
Cryptosporidium parvum Iowa II
Length = 934
Score = 165 bits (401), Expect = 2e-39
Identities = 105/288 (36%), Positives = 157/288 (54%), Gaps = 20/288 (6%)
Query: 105 KPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYIL 164
KP L F + G P + + K KP PIQ Q PI +SG+DM+G A TGSGKTL+YIL
Sbjct: 219 KPILNFSQCGLPLPIHHYLKKKNIIKPFPIQMQSIPILMSGYDMIGNAETGSGKTLAYIL 278
Query: 165 PAIVHI-----NNQPKSSRGDGPI--------ALVLAPTRELAQQIQEVCDKFANTSKIH 211
P I H+ NN P ++ D I A+++ PTRELA Q+ + + AN +
Sbjct: 279 PLIRHVLVQSNNNYPFNAEMDIQINKNTNLARAMIIIPTRELALQVYKQTTQLANLVDLT 338
Query: 212 NTCLFGGAPKGPQARDLDAGVEIVIATPGRLLD---FLESGRTNLKRCTYLVLDEADRML 268
+ GG Q + +G +I+I TPGR++D L + ++LV+DE DR+
Sbjct: 339 TNIICGGLSISHQLNKIRSGSDIIIGTPGRIIDIMTLLHKKIVIFQFISFLVIDEGDRLF 398
Query: 269 DMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNIL 328
DMGF PQ+ II IRPDRQ ++SAT+P ++ ++ L + +Q+ VG + N N+
Sbjct: 399 DMGFAPQLLSIISIIRPDRQIAIFSATFPNIIEQFTNKILHNPIQVIVGK-KGQMNQNVK 457
Query: 329 QIIDVC-MEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKM 375
Q I++ E ++ +L LL E AE +IF + VD++ K+
Sbjct: 458 QYIELLNNENDQFLRLLQLLGE-WAE-FGLIVIFCNRQTDVDELFAKL 503
>UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n=6;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium vivax
Length = 717
Score = 165 bits (401), Expect = 2e-39
Identities = 82/193 (42%), Positives = 123/193 (63%), Gaps = 3/193 (1%)
Query: 185 LVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLD 244
L+L PTREL Q+ + F I + ++GG PK Q +L G +IV+ATPGRLLD
Sbjct: 405 LILLPTRELCMQVVDEIKAFEKELHIRSVAVYGGVPKYTQISNLKKGADIVVATPGRLLD 464
Query: 245 FLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLA 304
LESG +L RC Y+V+DEADR+LDMGFE Q++KI+ Q+ ++Q L ++ATWP +V+ LA
Sbjct: 465 LLESGVIHLLRCIYVVIDEADRLLDMGFEKQLKKIMTQVNRNKQLLFFTATWPEQVRKLA 524
Query: 305 SEFLK-DYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIE 363
+F D ++I +G +L AN NI Q + + + + KL LK+ + NK +IF +
Sbjct: 525 YQFSSFDPVKIQIGKSELTANKNIQQSVVISSSIDLKKKLLDWLKQ--NYEGNKILIFCD 582
Query: 364 TKRRVDDITRKMK 376
TKR D + ++++
Sbjct: 583 TKRNCDSLCKELR 595
Score = 74.1 bits (174), Expect = 5e-12
Identities = 34/73 (46%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 109 TFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIV 168
+F E F + V++ ++ F +PT IQ WPIALSG D++G+A TGSGKTL++ LPA++
Sbjct: 279 SFSEVNFHEAVVNHLNAK-FKEPTAIQKVTWPIALSGKDLIGVAETGSGKTLAFALPALM 337
Query: 169 HINNQPKSSRGDG 181
HI Q + R G
Sbjct: 338 HILKQREGERKSG 350
>UniRef50_Q9GV07 Cluster: Vasa-related protein PlVAS1; n=1; Dugesia
dorotocephala|Rep: Vasa-related protein PlVAS1 - Dugesia
dorotocephala
Length = 573
Score = 164 bits (399), Expect = 3e-39
Identities = 105/288 (36%), Positives = 157/288 (54%), Gaps = 18/288 (6%)
Query: 96 ITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTG 155
+ + G N P P +F E P+++M+ I M + K TP+Q PI G D++ A TG
Sbjct: 101 VDVTGENTPGPIASFGELELPEFLMENIRDMKYVKLTPVQKYAVPIIDRGRDLMACAQTG 160
Query: 156 SGKTLSYILPAIVHIN------NQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSK 209
SGKT ++++P I ++ + +S P AL++ PTREL +QI S
Sbjct: 161 SGKTAAFLIPIIKGLHGTVLETDSSNTSSTAFPRALIMTPTRELCRQIFTAARLLCRGSN 220
Query: 210 IHNTCLFGGAPKGPQARDLDA-GVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRML 268
I ++GG R++ A G +I++ATPGRL+ FLE +L+ Y VLDEADRML
Sbjct: 221 IRCAYMYGGIEMNKSRRNIQATGCDILVATPGRLIHFLELVWVSLRYIKYFVLDEADRML 280
Query: 269 D-MGFEPQIRKIIEQIR----PDR--QTLMWSATWPREVQSLASEFLKDYLQINVGSLQL 321
D GF + KI ++ DR M+SAT+P E+Q+LAS L +YL + VG +
Sbjct: 281 DEEGFYEVVNKIYKEAHQSGDADRSIHLSMFSATFPNEIQTLASRLLSNYLFLAVGVVG- 339
Query: 322 AANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVD 369
+AN ++ Q I + +K T L+K I + KT+IF+E+KR D
Sbjct: 340 SANCDVKQEIIRAEQRDKVTSAIELIKTI---PDEKTLIFVESKRMAD 384
>UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep:
Vasa-like protein - Macrobrachium rosenbergii (Giant
fresh water prawn)
Length = 710
Score = 164 bits (399), Expect = 3e-39
Identities = 99/248 (39%), Positives = 147/248 (59%), Gaps = 15/248 (6%)
Query: 133 PIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRG----DGPIALVLA 188
P+Q G P G D++ A TGSGKT +++LP + + ++ P A+++A
Sbjct: 305 PVQKCGIP--RGGGDLMACAQTGSGKTAAFLLPILQQLMADGVAASSFVELQEPEAIIVA 362
Query: 189 PTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLES 248
PTREL QI KFA + + ++GG G Q R++ G IV TPGRLLD ++
Sbjct: 363 PTRELINQIFLEARKFAYGTCVRPVVVYGGVNTGFQLREISKGCNIVCGTPGRLLDVIQR 422
Query: 249 GRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQ----IRPDRQTLMWSATWPREVQSLA 304
G L + YLVLDEADRMLDMGFEP +R+++ + +RQTL++SAT+P+++Q LA
Sbjct: 423 GWIGLTKLRYLVLDEADRMLDMGFEPDMRRLVASPGMPPKENRQTLLFSATYPQDIQKLA 482
Query: 305 SEFLK-DYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIE 363
++FLK DYL + VG + A + ++ Q +Y K +L LK I E +T++F+E
Sbjct: 483 ADFLKTDYLFLAVGIVGGACS-DVEQTFVQVTKYSKREQLLDFLKTIGNE---RTMVFVE 538
Query: 364 TKRRVDDI 371
TKR+ D I
Sbjct: 539 TKRQADFI 546
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 164 bits (398), Expect = 4e-39
Identities = 100/283 (35%), Positives = 150/283 (53%), Gaps = 11/283 (3%)
Query: 99 KGRNIPKP-TLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSG 157
K + +P + F G P+ ++ + +GF T IQA P L+G D++G A TG+G
Sbjct: 5 KTETVTEPEAVAFASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTG 64
Query: 158 KTLSYILPAIVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSK-IHNTCLF 216
KT ++ LPA+ I+ K P +VLAPTRELA Q+ E + F K + L+
Sbjct: 65 KTAAFGLPALAKIDTSIKK-----PQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLY 119
Query: 217 GGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQI 276
GG GPQ + L+ G ++V+ TPGRL+D L L VLDEAD ML+MGF I
Sbjct: 120 GGQSYGPQFQQLERGAQVVVGTPGRLMDHLRRKSLKLDELRVCVLDEADEMLNMGFLEDI 179
Query: 277 RKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCME 336
+ I++ I Q ++SAT P ++ +A+ FLKD I V +++ A NI Q +
Sbjct: 180 QWILDHIPKTAQMCLFSATMPPAIRKIANRFLKDPEHIKVAAVK-KAKANITQ---YAWK 235
Query: 337 YEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
TK++ L + + + IIF+ T+ DI K++R G
Sbjct: 236 VSGITKMTALERIAEVVEYDAMIIFVRTRNDTVDIAEKLERAG 278
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 164 bits (398), Expect = 4e-39
Identities = 90/271 (33%), Positives = 145/271 (53%), Gaps = 3/271 (1%)
Query: 109 TFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIV 168
TF+ G +++ + +G+ +PTPIQ P L G D++GIA+TG+GKT ++ LP +
Sbjct: 37 TFESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEGKDLLGIAATGTGKTAAFSLPLLQ 96
Query: 169 HINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDL 228
I P + ALVL PTRELA Q+ E ++ I L+GG Q R L
Sbjct: 97 RIT--PGAHAPFTASALVLVPTRELAMQVAEAIHRYGQKLGISVVPLYGGQVISQQLRVL 154
Query: 229 DAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 288
GV++V+ATPGR LD L+ L++ +VLDEAD MLDMGF + I+ RQ
Sbjct: 155 KRGVDVVVATPGRALDHLQRKTLKLEQVRVVVLDEADEMLDMGFAEDLEAILSSTPEKRQ 214
Query: 289 TLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLK 348
T ++SAT P + S+A L++ +++ + ++ + + ++ + K++TL +
Sbjct: 215 TALFSATLPPRIASIAERHLREPVRVRIAREKVESG-ELPRVRQTAYIVPRAFKVATLSR 273
Query: 349 EIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
+ E I+F T+ VD++T + G
Sbjct: 274 VLDVEAPTAAIVFCRTRTEVDELTLSLNGHG 304
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 164 bits (398), Expect = 4e-39
Identities = 87/262 (33%), Positives = 142/262 (54%), Gaps = 4/262 (1%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
+ F + +++ + ++ + PT IQ P + G D++ A TG+GKT ++ LP +
Sbjct: 1 MLFSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQGKDILAGARTGTGKTAAFALPIL 60
Query: 168 VHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARD 227
++++ ++ + LVL PTRELA Q+ + +A +FGG PQ +
Sbjct: 61 EKLSSKERNKKRPQTRVLVLVPTRELANQVTQNIKSYAKKLPFKTLPVFGGVSSYPQIQA 120
Query: 228 LDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 287
L +G++IV+ATPGRLLD +L+ LV DEADRM DMGF I++I++ + R
Sbjct: 121 LKSGIDIVVATPGRLLDLALQNALSLEHIDTLVFDEADRMFDMGFIHDIKQIVKMLPEKR 180
Query: 288 QTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLL 347
Q L++SAT+P EV SL + LKD L+I + N L II + +++ K+ L
Sbjct: 181 QNLLFSATYPSEVMSLCNSMLKDPLRIQIEE----QNSTALNIIQRVILVDRDKKMELLN 236
Query: 348 KEIMAEKENKTIIFIETKRRVD 369
+ E ++ ++F TKR D
Sbjct: 237 EVFGVESIDQALVFTRTKRSAD 258
>UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Candida glabrata|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 582
Score = 164 bits (398), Expect = 4e-39
Identities = 115/312 (36%), Positives = 170/312 (54%), Gaps = 23/312 (7%)
Query: 84 ESDVEAWRSENEITLKGRNIPK-PTLTFDEAGF--PDYVMDEIDKMGFAKPTPIQAQGWP 140
E D R E IT KG+ K P + E D V + MGF +PT IQ P
Sbjct: 144 ERDWRIMREEFNITSKGKGAVKHPLRNWSETNVIPTDLVRALTEGMGFDEPTAIQRITIP 203
Query: 141 IALSGH-----DMVGIASTGSGKTLSYILPAIVHINNQPKSSRG----DGPIALVLAPTR 191
A+S + D++GIASTGSGKTL++ +P + ++ P DGP+ALVL PTR
Sbjct: 204 NAISSNKSVPRDILGIASTGSGKTLAFSIPILARLDALPARPVNLKTLDGPLALVLVPTR 263
Query: 192 ELAQQIQEVCDK----FANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLE 247
ELAQQI + ++ + N ++ + GG + L G +I+IATPGRLLD L+
Sbjct: 264 ELAQQISQEINRLLSAWENKKNLNAVSIVGGHSMSDISHTLRNGCDILIATPGRLLDVLD 323
Query: 248 SGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD----RQTLMWSATWPREVQSL 303
+ L + LVLDEADRM+D+GFE Q++ I+ + D RQT++++AT V+S+
Sbjct: 324 NHLVVLNKIQSLVLDEADRMIDLGFEDQMKSILSHLMADELAARQTMLFTATLSSSVESI 383
Query: 304 ASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIE 363
A +LK+ L ++VGS + I Q++ + +K KLS LK+ + + IIFI
Sbjct: 384 AKGYLKNPLHVSVGSRWDSDKPLITQVVRHTGDDDK--KLS-FLKDDLIKNGLPAIIFIN 440
Query: 364 TKRRVDDITRKM 375
K D +T ++
Sbjct: 441 YKETADWLTLRL 452
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 164 bits (398), Expect = 4e-39
Identities = 95/272 (34%), Positives = 153/272 (56%), Gaps = 10/272 (3%)
Query: 109 TFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIV 168
TF + G +++ ++ +G+ KP+PIQA+ P L+G D++G+A TGSGKT ++ LP +
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66
Query: 169 HINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSK-IHNTCLFGGAPKGPQARD 227
+++ + K+ P LVLAPTRELA Q+ E F+ + ++ L+GG Q R
Sbjct: 67 NLDPELKA-----PQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRA 121
Query: 228 LDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 287
L G +IV+ TPGRLLD L+ G +L + + LVLDEAD ML MGF + I+ QI
Sbjct: 122 LRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGH 181
Query: 288 QTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLL 347
QT ++SAT P ++ + F+K+ ++ + S + +I Q K L+
Sbjct: 182 QTALFSATMPEAIRRITRRFMKEPQEVRIQS-SVTTRPDISQSYWTVWGMRKN---EALV 237
Query: 348 KEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
+ + AE + IIF+ TK ++ ++R+G
Sbjct: 238 RFLEAEDFDAAIIFVRTKNATLEVAEALERNG 269
>UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Deinococcus|Rep: DEAD/DEAH box helicase-like protein -
Deinococcus geothermalis (strain DSM 11300)
Length = 591
Score = 163 bits (397), Expect = 5e-39
Identities = 98/276 (35%), Positives = 157/276 (56%), Gaps = 11/276 (3%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
+ FD+ P+ + + G + +PIQA+ P L+G D++G A TG+GKTL++ LP I
Sbjct: 1 MNFDQLIAPELAA-RLAERGITEASPIQAESLPHTLAGKDLIGRARTGTGKTLAFALPII 59
Query: 168 VHI---NNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQ 224
++ + + RG P A+V+APTRELA+Q+ E K + ++ ++GGA GPQ
Sbjct: 60 QNLTAPDGRGSRERGRLPRAIVIAPTRELAKQVAEEFSK--SGPQLSTVTVYGGAAYGPQ 117
Query: 225 ARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIR 284
L GV++V+ TPGRL+D LE G +L Y VLDEAD ML +GF I I++Q
Sbjct: 118 ENALRRGVDVVVGTPGRLIDHLERGNLDLSAIQYAVLDEADEMLSVGFADAIETILQQTP 177
Query: 285 PDRQTLMWSATWPREVQSLASEFLKDYLQIN-VGSLQLAANHNILQIIDVCMEYEKETKL 343
RQT+++SAT E+ LA ++L++ + ++ VG + A ++ + + V + + L
Sbjct: 178 AARQTMLFSATLNDEIHRLARKYLREPVVVDLVGEGKSQAAQSV-EHLKVKVGRTRTRVL 236
Query: 344 STLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
+ LL E K I+F TKR D++ ++ G
Sbjct: 237 ADLLTVYNPE---KAIVFTRTKREADELANELIHRG 269
>UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein;
n=37; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 427
Score = 163 bits (397), Expect = 5e-39
Identities = 94/274 (34%), Positives = 158/274 (57%), Gaps = 9/274 (3%)
Query: 109 TFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIV 168
+F E G + + + ++ +A PTPIQA P LSG D++ A+TGSGKT ++ +P +
Sbjct: 10 SFAELGIIAPLCNRLTELTYAAPTPIQAATIPAVLSGRDVLAGANTGSGKTAAFAVPLLQ 69
Query: 169 HINNQPKSSRGDGPI-ALVLAPTRELAQQIQEVCDKFAN--TSKIHNTCLFGGAPKGPQA 225
+ + + G + LVL PTRELAQQ+ + +A+ ++ FGG Q
Sbjct: 70 RLFEAKTAEKSAGQVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNLQM 129
Query: 226 RDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP 285
+ L AG ++++ATPGRLLD L S L R LVLDEADRML +GF ++ +++E +
Sbjct: 130 QSLRAGADVLVATPGRLLDLLASNALKLNRVLALVLDEADRMLSLGFTDELNQVLEALPA 189
Query: 286 DRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLST 345
+QTL++SAT+P EV++L ++ L L+ ++ S Q + ++I V E +K L+
Sbjct: 190 KKQTLLYSATFPEEVRALTAKLLHQPLEYHLQSEQESTIEQ--RVITVNRE-QKTALLAH 246
Query: 346 LLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
L+K+ + ++ +IF+ K + + +K+ + G
Sbjct: 247 LIKQ---HQWSQALIFVSAKNTCNHLAQKLSKRG 277
>UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 1130
Score = 163 bits (397), Expect = 5e-39
Identities = 95/251 (37%), Positives = 138/251 (54%), Gaps = 5/251 (1%)
Query: 119 VMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSR 178
V I GF PTPIQ + P+ L G D+V + TGSGKT ++I+P I + N SR
Sbjct: 310 VYKAIKTRGFNMPTPIQRKAIPLILEGRDVVACSRTGSGKTAAFIIPLINKLQNH---SR 366
Query: 179 GDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIAT 238
G AL++ PTRELA QI V F + + T + GG Q L + +I+IAT
Sbjct: 367 IVGARALIVVPTRELALQIASVLKTFIKFTDLTYTLIVGGHGLEGQFESLASNPDIIIAT 426
Query: 239 PGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPR 298
PGRL ++ +L + +L+ DE D + +MGF Q++ I++++ RQTLM+SAT P
Sbjct: 427 PGRLSQLIDETDLSLNKVEFLIFDECDYLFEMGFADQMKTILKKVSQQRQTLMFSATIPE 486
Query: 299 EVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKT 358
E+ S A LK+Y+ + + S + N NI + EK L LLK ++ +EN +
Sbjct: 487 ELSSFARAGLKEYVFVKLDS-EFTINENITLNFILTRNNEKIASLVYLLKSVIPSEEN-S 544
Query: 359 IIFIETKRRVD 369
I+F TK VD
Sbjct: 545 IVFASTKYHVD 555
>UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10;
Streptomyces|Rep: Probable DEAD-box RNA helicase -
Streptomyces coelicolor
Length = 498
Score = 163 bits (396), Expect = 7e-39
Identities = 96/270 (35%), Positives = 147/270 (54%), Gaps = 8/270 (2%)
Query: 110 FDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVH 169
F + P ++ + + G P PIQA P +L+G D++G TGSGKTL++ L +
Sbjct: 71 FADLDMPGELLAALGQQGVTVPFPIQAATLPNSLAGRDIMGRGRTGSGKTLAFGLALLAR 130
Query: 170 INNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLD 229
+ R P+ LVL PTRELAQQ+ + +A + K+ + GG G QA L
Sbjct: 131 TAGRRAEPRQ--PLGLVLVPTRELAQQVTDALTPYARSVKLRLATVVGGMSIGRQASALR 188
Query: 230 AGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQT 289
G E+V+ATPGRL D ++ G L + + VLDEAD+M DMGF PQ+ +++Q+RP+ Q
Sbjct: 189 GGAEVVVATPGRLKDLIDRGDCRLNQVSVTVLDEADQMADMGFMPQVTALLDQVRPEGQR 248
Query: 290 LMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKE 349
+++SAT R V L +L D + V S+ +A V + + +T E
Sbjct: 249 MLFSATLDRNVDLLVRRYLSDPV---VHSVDPSAGAVTTMEHHVLHVHGADKHAAT--TE 303
Query: 350 IMAEKENKTIIFIETKRRVDDITRKMKRDG 379
I A ++ + I+F++TK VD +TR + G
Sbjct: 304 I-AARDGRVIMFLDTKHAVDRLTRDLLNSG 332
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 163 bits (396), Expect = 7e-39
Identities = 96/272 (35%), Positives = 148/272 (54%), Gaps = 12/272 (4%)
Query: 110 FDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVH 169
F+ G PD++ + + +G+ TPIQA P+ L G D+VG+A TG+GKT ++ LP + +
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALPILAN 70
Query: 170 INNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFAN-TSKIHNTCLFGGAPKGPQARDL 228
I+ + +S P ALVL PTRELAQQ+ E + + +FGGA Q + L
Sbjct: 71 IDVKVRS-----PQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQLKSL 125
Query: 229 DAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 288
G IV+ATPGRLLD +E +L +VLDEAD ML MGF + I+ + +R+
Sbjct: 126 REGTHIVVATPGRLLDHIERRSIDLTGINAVVLDEADEMLRMGFIDDVDTILAKTPKERK 185
Query: 289 TLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEK-ETKLSTLL 347
++SAT P+ V+ +A++ L + +I+V + N NI Q C K +KL L
Sbjct: 186 VALFSATMPKRVRDIANKHLSNPAEISVAA-AATTNENIEQ----CYWLAKGASKLEALK 240
Query: 348 KEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
+ + E I+F T+ I ++++ G
Sbjct: 241 RLLAFEDTEGVIVFTRTRESTTVIAEQLRQTG 272
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 163 bits (395), Expect = 9e-39
Identities = 96/274 (35%), Positives = 149/274 (54%), Gaps = 12/274 (4%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
L F + G D VM + K+G+ P+PIQA P L+G D++G A TG+GKT ++ LP +
Sbjct: 15 LLFADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLL 74
Query: 168 VH-INNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFA-NTSKIHNTCLFGGAPKGPQA 225
+ NQ K P LVLAPTRELA Q+ E ++A + S ++GG G Q
Sbjct: 75 TRTVLNQVK------PQVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSYGQQL 128
Query: 226 RDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP 285
L GV +++ TPGR++D LE G +L LVLDEAD ML MGF + +++ ++
Sbjct: 129 AALKRGVHVIVGTPGRVIDHLERGTLDLSELKTLVLDEADEMLRMGFIEDVEEVLRKLPA 188
Query: 286 DRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLST 345
RQ ++SAT P +++ +A +L+D +++ + + A NI Q KL
Sbjct: 189 SRQVALFSATMPPQIRRIAQTYLQDPIEVTIATKTTTA-ANIRQRY---WWVSGLHKLDA 244
Query: 346 LLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
L + + E + IIF+ TK +++ K++ G
Sbjct: 245 LTRILEVETFDAMIIFVRTKAATEELAEKLQARG 278
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 163 bits (395), Expect = 9e-39
Identities = 93/271 (34%), Positives = 142/271 (52%), Gaps = 5/271 (1%)
Query: 110 FDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVH 169
F E ++ + +G+ +PTPIQ + P ++G D++G A+TG+GKT ++ LP +
Sbjct: 59 FAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGKTAAFALPLLHR 118
Query: 170 INNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLD 229
+ + G P ALVL PTRELA Q+ E ++ ++GGAP G Q R L
Sbjct: 119 LTDDRTGDHG--PQALVLVPTRELAVQVSEAIHRYGRDLGARVLPVYGGAPIGRQVRALV 176
Query: 230 AGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQT 289
GV++V+ATPGR LD + G L +VLDEAD MLDMGF I I+EQ RQT
Sbjct: 177 QGVDVVVATPGRALDHMGRGTLRLDGLHTVVLDEADEMLDMGFAEDIDAILEQAPQKRQT 236
Query: 290 LMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQII-DVCMEYEKETKLSTLLK 348
+++SAT P + +A L+D ++I +G + A ++ V + K + L +
Sbjct: 237 VLFSATLPPRMDQIARRHLRDPVRIQIG--RAAPEPGAAPLVRQVSYVVPRAYKTAALGR 294
Query: 349 EIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
+ E I+F T+ VD + + G
Sbjct: 295 ILDVESPRSAIVFCRTREEVDQLADSLNGRG 325
>UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein
precursor; n=2; Actinomycetales|Rep: DEAD/DEAH box
helicase domain protein precursor - Nocardioides sp.
(strain BAA-499 / JS614)
Length = 507
Score = 163 bits (395), Expect = 9e-39
Identities = 90/273 (32%), Positives = 146/273 (53%), Gaps = 12/273 (4%)
Query: 110 FDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVH 169
F + G P + + G +PTPIQA P +L+G D++G TGSGKT +++LP +
Sbjct: 10 FADLGVPASLAAVLADRGIVQPTPIQAATLPDSLAGRDVLGRGRTGSGKTYAFLLPLVAR 69
Query: 170 INNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLD 229
+ + ++ P ALVLAPTREL QI+E A T+ + +FGG + PQ + L
Sbjct: 70 LTASGRPAQARKPRALVLAPTRELVNQIEEALKPLARTAGLTTQTVFGGVGQNPQVQGLR 129
Query: 230 AGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQT 289
G +IV+A PGRL D + G +L + VLDEAD M D+GF P +R+I+++ D Q
Sbjct: 130 RGADIVLACPGRLEDLIGQGHCDLSQVEITVLDEADHMADLGFLPGVRRIMDRTPRDGQR 189
Query: 290 LMWSATWPREVQSLASEFLKDYLQINVGSLQ---LAANHNILQIIDVCMEYEKETKLSTL 346
L++SAT + + L FL++ + S Q +H++L + +E ++ L
Sbjct: 190 LLFSATLDKAIDVLVKRFLRNPVTHQADSAQSPVATMDHHVLHV-------AREHRVPVL 242
Query: 347 LKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
+ + +T++F TK + R++ + G
Sbjct: 243 VD--LTSAPGRTVVFTRTKYGAKALARQLNKSG 273
>UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Marinomonas|Rep: DEAD/DEAH box helicase domain
protein - Marinomonas sp. MWYL1
Length = 417
Score = 162 bits (394), Expect = 1e-38
Identities = 99/275 (36%), Positives = 151/275 (54%), Gaps = 7/275 (2%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
++F E + I +GF PT IQ Q PIAL G D++ A TG+GKT+++ PA+
Sbjct: 17 MSFAELDLDFTIEQAISDLGFEAPTEIQEQAIPIALDGSDLLATAPTGTGKTIAFCAPAV 76
Query: 168 VHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARD 227
HI ++ + S P L+LAP+RELA+QI V ++ ++I + + GG P G Q +
Sbjct: 77 QHILDRDEQST-TAPKVLILAPSRELARQIFNVVEQLTKHTRIQSHLIIGGTPYGMQQQQ 135
Query: 228 LDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 287
L +I++ATPGRL++ E +L +Y V+DEADRMLDMGF I I +++ +
Sbjct: 136 LSEPCDILVATPGRLVELDEKQWLDLTDVSYFVIDEADRMLDMGFVSAINCIAKELPKEH 195
Query: 288 QTLMWSATWPRE-VQSLASEFL-KDYLQINVGSLQLAANHNILQI-IDVCMEYEKETKLS 344
QTLM+SAT E + AS L + QI +G I QI V E KE L
Sbjct: 196 QTLMFSATLEGEKMGRFASALLNSETQQIRLGESSRTVPSQIRQIAYRVDSEEHKEAVLK 255
Query: 345 TLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
LL + E+ + ++F+ + VD +++++ G
Sbjct: 256 HLLTQ---ERVQQAVLFVSNREHVDIWVQRIRKMG 287
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 162 bits (394), Expect = 1e-38
Identities = 89/275 (32%), Positives = 153/275 (55%), Gaps = 5/275 (1%)
Query: 105 KPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYIL 164
+ +++F++ G ++ I+ G+ +P+ IQAQ P L G D++ A TG+GKT + L
Sbjct: 2 RTSMSFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTL 61
Query: 165 PAIVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQ 224
P ++ I ++ ++++ + ALVL PTRELA Q+ E + + +T +FGG PQ
Sbjct: 62 P-LLEILSKGENAQSNQVRALVLTPTRELAAQVAESVKNYGQHLSLKSTVVFGGVKINPQ 120
Query: 225 ARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIR 284
L G +I+IATPGR++D + LVLDEADRMLDMGF I+KI+ +
Sbjct: 121 MMALRRGADILIATPGRMMDLYNQKAVRFDKLEVLVLDEADRMLDMGFIHDIKKILAILP 180
Query: 285 PDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLS 344
RQ L++SAT+ E++ LA + + ++I+V N + + +K+ K
Sbjct: 181 KKRQNLLFSATFSPEIRQLAKGLVNNPIEISV----TPRNATAVSVEQWLHPVDKKRKTE 236
Query: 345 TLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
L++ I + ++ ++F TK + IT++++ G
Sbjct: 237 LLIQLIADGRWDQALVFSRTKHGANKITKQLEDAG 271
>UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia
girellae|Rep: RNA helicase - Neobenedenia girellae
Length = 634
Score = 162 bits (394), Expect = 1e-38
Identities = 109/310 (35%), Positives = 159/310 (51%), Gaps = 21/310 (6%)
Query: 85 SDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALS 144
+DV+ R+ N N+P D PD V ID+ +A PTP+Q P+ L+
Sbjct: 187 TDVDVKRTGNN----AENVPVIEHFMDATDLPDTVKTNIDRANYAVPTPVQRFLLPVLLA 242
Query: 145 GHDMVGIASTGSGKTLSYILPAIVHINNQPKSS----RGDG---PIALVLAPTRELAQQI 197
G D + A TGSGKT +++LP + + + K DG P A+V+ PT ELAQQI
Sbjct: 243 GRDALATAQTGSGKTAAFMLPILKTVLDPSKGPVLGVAADGKPAPRAIVVVPTHELAQQI 302
Query: 198 QEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCT 257
KFA + + GG L +GV +++ATPGRLL F+ SG +L C
Sbjct: 303 LFEGMKFATGTSVRVHLTHGGVNVRHDLMQLRSGVSVLVATPGRLLHFIRSGLISLSMCN 362
Query: 258 YLVLDEADRMLDMGFEPQIRKIIEQ----IRPDRQTLMWSATWPREVQSLASEFLKDYLQ 313
++VLDEADR+LD GFE ++R+ +E R RQ +M SAT+ EV+ L L D +
Sbjct: 363 FIVLDEADRLLDEGFEGEMREFLEHEDLPPRETRQVVMLSATFEDEVRDLGMSLLADPIT 422
Query: 314 INVGSLQLAANHNILQIIDVCMEYEKETKLSTLLK-EIMAEKEN----KTIIFIETKRRV 368
+ VG + + +I Q I +K KL LLK +I K+N K I+F+E +R
Sbjct: 423 VTVGVVGVPPG-SINQEIIAVPNGDKHDKLLELLKTDIDNYKQNNVLKKIIVFVERRRTA 481
Query: 369 DDITRKMKRD 378
+ + +
Sbjct: 482 QQVASALSME 491
>UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helicase
protein; n=1; Methylophilales bacterium HTCC2181|Rep:
putative ATP-dependent RNA helicase protein -
Methylophilales bacterium HTCC2181
Length = 427
Score = 162 bits (393), Expect = 2e-38
Identities = 91/269 (33%), Positives = 149/269 (55%), Gaps = 7/269 (2%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
++F ++ I + G+ +PTPIQ + P + ++ A TG+GKT +++LP +
Sbjct: 1 MSFQTFNLDASILKAIQEAGYDQPTPIQTKSIPEIMLNKHVLASAQTGTGKTAAFVLPIL 60
Query: 168 VHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARD 227
+ S G GP L+++PTRELA QI + K++ +I++ + GG G Q R
Sbjct: 61 DKLTKN--RSEGRGPRVLIVSPTRELATQITDSIKKYSRYLRINSITITGGISYGLQNRM 118
Query: 228 LDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 287
++I++ATPGRLLD + + N K ++LDEADRMLDMGF P IRKI +
Sbjct: 119 FSKPIDILVATPGRLLDLYQQKKINFKGLEVMILDEADRMLDMGFVPDIRKIYNATSKKQ 178
Query: 288 QTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVC-MEYEKETKLSTL 346
Q LM+SAT+ +Q +A EFL + + I++ ++ + NI Q+I + K+ L
Sbjct: 179 QMLMFSATFDPPIQKIAQEFLTNPVTISI-KPDVSGHKNIKQLIYFADNQSHKQQMLDHF 237
Query: 347 LKEIMAEKENKTIIFIETKRRVDDITRKM 375
+K ++ + IIF TKR D ++ ++
Sbjct: 238 IKN---DEVTQAIIFTATKRMADQLSDQL 263
>UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 585
Score = 162 bits (393), Expect = 2e-38
Identities = 106/320 (33%), Positives = 163/320 (50%), Gaps = 31/320 (9%)
Query: 84 ESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIAL 143
E+D R I + + KP +D+ D ++ I + + PTPIQ PIAL
Sbjct: 153 ENDWRIIRENLNIFVNNNEVIKPLRKWDDMNVCDDLLLLIKNI-YENPTPIQCASIPIAL 211
Query: 144 SGHDMVGIASTGSGKTLSYILPAIVHINNQPK---SSRGDGPIALVLAPTRELAQQIQEV 200
D++ +A TG+GKT +Y++P I + PK + GP ALVLAPTRELA QIQ+
Sbjct: 212 KMRDLIALAETGTGKTFAYLIPLIQFVLKLPKLTEETSASGPYALVLAPTRELALQIQKE 271
Query: 201 CDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLV 260
K A + C GG P PQ +L G EIV+A PGRL D L L +C ++V
Sbjct: 272 TLKLATPFGLRVCCCIGGEPMQPQIEELSNGAEIVVAAPGRLKDLLNQSYLVLGQCYFVV 331
Query: 261 LDEADRMLDMGFEPQIRKIIEQI---------------------RPD-RQTLMWSATWPR 298
LDEAD+M+D+G + Q+R I ++ P R TLM+SAT P
Sbjct: 332 LDEADKMIDLGLDVQVRYIFSELPSVKDGSTEEIISMEKENASGNPSTRTTLMYSATMPS 391
Query: 299 EVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKT 358
++ + +E+L+ + I++G A N+ Q I + K+ KL ++K T
Sbjct: 392 TLEKITNEYLRRPITISIGKTGNVA-ENVKQNILWVEDNMKKRKLIQVIK----SSSPPT 446
Query: 359 IIFIETKRRVDDITRKMKRD 378
I+F+ ++ V++I ++++
Sbjct: 447 IVFVNQQKTVEEICLLLEKE 466
>UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2;
Gammaproteobacteria|Rep: ATP-dependent rna helicase Rhl
- Dichelobacter nodosus (strain VCS1703A)
Length = 432
Score = 162 bits (393), Expect = 2e-38
Identities = 97/281 (34%), Positives = 158/281 (56%), Gaps = 7/281 (2%)
Query: 102 NIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLS 161
N K T F + +++ ++ + F K TPIQAQ P+ L+G+D++GIA TG+GKT +
Sbjct: 3 NENKNTAHFTDFPIHSALLEALEDIHFTKTTPIQAQTLPLTLAGYDVMGIAQTGTGKTAA 62
Query: 162 YILPAIVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPK 221
++L + ++ P + GP A+VLAPTRELA QI++ D + + + ++GG
Sbjct: 63 FLLSLMHYLMTNPVHPKAKGPWAIVLAPTRELAIQIKKEMDLLGAYTGLVSLAIYGGTSI 122
Query: 222 GPQARDLDA-GVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKII 280
Q + A V+++I TPGR++D + LK VLDEADRM D+GF +R ++
Sbjct: 123 EHQKKLFQACNVDVIIGTPGRIIDLFKQKVFRLKNIEVCVLDEADRMFDLGFIDDVRYLL 182
Query: 281 EQIRP--DRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYE 338
Q+ P +R L++SAT P++VQ LA E + + S Q AN NI + ++E
Sbjct: 183 RQMPPAYERLNLLFSATMPQKVQELAYEHFNAPKVVAIESQQTTAN-NITHYLYHTAKHE 241
Query: 339 KETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
K T L LL E+ +++IF+ TK ++ ++ + +G
Sbjct: 242 K-TPL--LLGLFARERPERSMIFLNTKHDLERLSLVLTANG 279
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.136 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 383,194,348
Number of Sequences: 1657284
Number of extensions: 16601159
Number of successful extensions: 46326
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 266
Number of HSP's that attempted gapping in prelim test: 42629
Number of HSP's gapped (non-prelim): 1711
length of query: 379
length of database: 575,637,011
effective HSP length: 102
effective length of query: 277
effective length of database: 406,594,043
effective search space: 112626549911
effective search space used: 112626549911
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 73 (33.5 bits)
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