Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001336-TA|BGIBMGA001336-PA|IPR014001|DEAD-like
helicases, N-terminal, IPR000629|ATP-dependent helicase, DEAD-box,
IPR014021|Helicase superfamily 1 and 2 ATP-binding, IPR014014|DEAD-box
RNA helicase Q motif, IPR013957|Protein of unknown function DUF1777,
IPR011545|DEAD/DEAH box helicase, N-terminal
(379 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 356 1e-98
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 214 1e-55
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 208 8e-54
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 3e-47
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 172 5e-43
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 163 2e-40
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 151 9e-37
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 150 2e-36
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 141 7e-34
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 140 2e-33
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 137 2e-32
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 137 2e-32
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 129 3e-30
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 126 4e-29
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 126 4e-29
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 124 1e-28
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 99 5e-21
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 97 2e-20
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 95 1e-19
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 1e-18
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 87 2e-17
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 87 2e-17
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 86 4e-17
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 75 1e-13
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 1e-13
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 73 4e-13
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 73 4e-13
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 71 2e-12
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 1e-11
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 66 6e-11
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 6e-11
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 64 2e-10
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 61 1e-09
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 53 3e-07
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 51 2e-06
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 44 2e-04
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 40 0.004
SB_51385| Best HMM Match : DEAD (HMM E-Value=0.00031) 38 0.010
SB_34740| Best HMM Match : DEAD (HMM E-Value=0.00031) 38 0.010
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 36 0.041
SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.22
SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.22
SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.22
SB_51441| Best HMM Match : DEAD (HMM E-Value=4.9e-19) 33 0.51
SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8) 32 0.67
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_50927| Best HMM Match : DEAD (HMM E-Value=3.2e-06) 29 4.7
SB_47730| Best HMM Match : Ion_trans (HMM E-Value=1e-14) 29 4.7
SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32) 29 4.7
SB_8488| Best HMM Match : Kelch_1 (HMM E-Value=3.3e-13) 29 4.7
SB_55048| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 356 bits (876), Expect = 1e-98
Identities = 172/303 (56%), Positives = 215/303 (70%), Gaps = 24/303 (7%)
Query: 77 LDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQA 136
+D E R + +V+A+R ++T+ GRN+PKP TF+E+ FPDY+ + GF +PT IQA
Sbjct: 52 MDCEARGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQA 111
Query: 137 QGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLAPTRELAQQ 196
Q +ILP IVHIN+QP GDGPI LVL PTRELAQQ
Sbjct: 112 Q------------------------FILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQ 147
Query: 197 IQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRC 256
+QEV K+ +TC++GGAPKGPQ R+L+ GVEI IATPGRL+D LES +TNL+RC
Sbjct: 148 VQEVAYSVGKHCKLRSTCIYGGAPKGPQIRELERGVEICIATPGRLIDMLESRKTNLRRC 207
Query: 257 TYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDYLQINV 316
TYLVLDEADRMLDMGFEPQIR II+QIRPDRQTLMWSATWP+EVQ LA +FL DY+ I V
Sbjct: 208 TYLVLDEADRMLDMGFEPQIRTIIDQIRPDRQTLMWSATWPKEVQGLAHDFLSDYVHITV 267
Query: 317 GSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMK 376
GSL L ANH ILQI+DVC ++EKE + + + I+ +T+IF ETKRR D++TRK++
Sbjct: 268 GSLGLTANHKILQIVDVCEDHEKEHNVGSFIGGIVILSSLQTLIFTETKRRADELTRKLR 327
Query: 377 RDG 379
DG
Sbjct: 328 SDG 330
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 214 bits (522), Expect = 1e-55
Identities = 109/254 (42%), Positives = 156/254 (61%), Gaps = 16/254 (6%)
Query: 66 KPFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDK 125
KPF K+FY H ++ K+ + +++ R + I + G +P ++F GF + +M I K
Sbjct: 475 KPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDEQMMASIRK 534
Query: 126 MGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIAL 185
+ + +PT IQ Q PIALSG D++GIA TGSGKT +++ PA+VHI +QP+ GDGPI L
Sbjct: 535 LEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALVHIMDQPELQVGDGPIVL 594
Query: 186 VLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDF 245
+ APTREL QQI +F IH +FGG K Q++ L G EIV+ATPGRL+D
Sbjct: 595 ICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKALQEGAEIVVATPGRLIDH 654
Query: 246 LESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLAS 305
+++ TNL R TYLV DEADRM DMGF L++SAT+ ++V+ L
Sbjct: 655 VKAKATNLHRVTYLVFDEADRMFDMGF----------------ALLFSATFKKKVEHLCR 698
Query: 306 EFLKDYLQINVGSL 319
+ L D +++ +G L
Sbjct: 699 DILVDPVRVVIGEL 712
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 208 bits (507), Expect = 8e-54
Identities = 110/293 (37%), Positives = 173/293 (59%), Gaps = 12/293 (4%)
Query: 95 EITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIAST 154
E+ + G N + +F+EA + ++ + K + KPTP+Q PI ++G D++ A T
Sbjct: 698 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQT 757
Query: 155 GSGKTLSYILPAIVHINNQPKSSRG----DGPIALVLAPTRELAQQIQEVCDKFANTSKI 210
GSGKT +++LP + + N +S P A+ +APTRELA QI KFA+ + +
Sbjct: 758 GSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKFAHGTML 817
Query: 211 HNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDM 270
+GG Q R L +G +++ TPGRL DF+E G+ +LK +L+LDEADRMLDM
Sbjct: 818 RPVVCYGGVSVSHQLRQLQSGCNLLVGTPGRLTDFIEKGKVSLKGLQFLILDEADRMLDM 877
Query: 271 GFEPQIRKIIEQI----RPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHN 326
GFEP IR+I+E + + +RQTLM+SAT+P E+Q LA +FL DYL + VG + +
Sbjct: 878 GFEPAIRRIVESMGMPDKSERQTLMFSATFPEEIQRLAGDFLNDYLFLTVGRVG-GTTSD 936
Query: 327 ILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
I Q + + EK +L+ +L + + +T++F+E+KR D + + +G
Sbjct: 937 IEQTVIEVTDNEKRDRLTQILGDAGTD---RTLVFVESKRSADFLAIFLSGEG 986
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 186 bits (453), Expect = 3e-47
Identities = 103/255 (40%), Positives = 148/255 (58%), Gaps = 6/255 (2%)
Query: 98 LKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSG 157
+ G N P +F+E F + +M I + G+ +PTP+Q PI ++G D++ A TGSG
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSG 528
Query: 158 KTLSYILPAIVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFG 217
KT +Y+LP + + Q ++ P+AL +APTRELA+QI KF++ + I +G
Sbjct: 529 KTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPIKVCVCYG 588
Query: 218 GAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIR 277
G QA L+ G ++ TPGRL DF+ + L +L+LDEADRMLD+GF P I
Sbjct: 589 GVSVPYQASQLERGCHFLVGTPGRLQDFVSREKIYLGSIQHLILDEADRMLDLGFGPDIH 648
Query: 278 KIIEQ----IRPDRQTLMWSATWPREVQSLASEFLK-DYLQINVGSLQLAANHNILQIID 332
K+IE+ + RQTLM+SAT+P E+Q LA FLK DYL + VG + N +I Q +
Sbjct: 649 KLIEESNMTAKESRQTLMFSATFPDEIQHLAGSFLKPDYLFLAVGRVG-GTNLDITQHVI 707
Query: 333 VCMEYEKETKLSTLL 347
EK KL +L
Sbjct: 708 TVNGSEKRDKLHEIL 722
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 172 bits (418), Expect = 5e-43
Identities = 118/336 (35%), Positives = 173/336 (51%), Gaps = 37/336 (11%)
Query: 68 FKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMG 127
F +Y + V + + V+ R +N I ++G + PKP +F + P + + K
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 128 FAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVL 187
F PTPIQ Q +SG D++G+A TGSGKTL+Y LP + + + S+ GD P+AL+L
Sbjct: 92 FQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALIL 151
Query: 188 APTRELAQQ----IQEVCDKF--------ANTSKIHNTCLF----------GGAPKGPQA 225
PTREL QQ + E+ D +N S I++T F GG P Q
Sbjct: 152 TPTRELMQQVFMNVSEMLDVIRCPGNPGPSNQSVIYDTQQFTARYKAVAVCGGVPVSTQT 211
Query: 226 RDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKII---EQ 282
L G ++V+ATPGRLLD L + TYLV+DE DRML MG E Q+RKI+
Sbjct: 212 IALREGADVVVATPGRLLD--------LYKITYLVMDEPDRMLGMGMEEQLRKIVGLATG 263
Query: 283 IRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETK 342
RQTL+WSAT P ++ LA + + + I VG L A ++ Q + Y+K K
Sbjct: 264 TSRARQTLLWSATLPESLERLARSAVLNPITIQVGPGGLIA-PSVQQNVVFLYHYQKPQK 322
Query: 343 LSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRD 378
LL+ + I+F + + VD +T +K++
Sbjct: 323 ---LLETLRTTPYPPVIVFTSSIQNVDYVTELLKQE 355
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 163 bits (396), Expect = 2e-40
Identities = 100/276 (36%), Positives = 155/276 (56%), Gaps = 30/276 (10%)
Query: 108 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAI 167
L F++ + ++ + G+ KPTP+Q PI D++ A TGSGKT ++++P +
Sbjct: 875 LQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMACAQTGSGKTAAFLIPIL 934
Query: 168 VHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARD 227
I + GP A P F+ S ++GGA G Q R+
Sbjct: 935 SRIYME-------GPPA----PP------------DFSYRSLCRPCVVYGGADIGSQLRE 971
Query: 228 LDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQ-IRPD 286
LD +++ATPGRL+D ++ GR L +LVLDEADRMLDMGFEPQIR+I++Q P
Sbjct: 972 LDRNCHLLVATPGRLVDMMDRGRVGLDSIRFLVLDEADRMLDMGFEPQIRRIVDQDSMPK 1031
Query: 287 ---RQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKL 343
RQTLM+SAT+P+E+Q LA +FL++Y+ + VG + + + NI Q + E++K + L
Sbjct: 1032 TGIRQTLMFSATFPKEIQMLARDFLENYIFLAVGKVG-STSENITQKVVWVDEFDKRSFL 1090
Query: 344 STLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
LL + + T++F+ETK+ D + + +DG
Sbjct: 1091 LDLLN--ASGPQQLTLVFVETKKGADALEMFLAKDG 1124
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 151 bits (366), Expect = 9e-37
Identities = 93/228 (40%), Positives = 126/228 (55%), Gaps = 24/228 (10%)
Query: 158 KTLSYILPAIVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFG 217
K SY P + P G IA+V+ PTRELA QI C KF + + C++G
Sbjct: 121 KKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYG 180
Query: 218 GAPKGPQARDLDAGVEIVIATPGRLLDFL--ESGR-TNLKRCTYLVLDEADRMLDMGFEP 274
G Q +L G EI++ TPGR++D L +GR TN +RCTYLVLDEADRM DMGFEP
Sbjct: 181 GTGISEQIAELKRGAEIIVCTPGRMIDMLTANNGRVTNCQRCTYLVLDEADRMFDMGFEP 240
Query: 275 QIRK--------IIEQIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHN 326
QI K II+ IRPDRQT+M+SAT+PR++++LA + L ++I VG +
Sbjct: 241 QITKIRYPKVMRIIDCIRPDRQTVMFSATFPRQMEALARKILDKPIEIQVGGRSV----- 295
Query: 327 ILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRK 374
VC + E+ L + AE E K + E +R+D + K
Sbjct: 296 ------VCSDVEQNVALGLQDSDDEAEAEEKAV--EEIDKRLDAVFSK 335
Score = 74.9 bits (176), Expect = 1e-13
Identities = 35/90 (38%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 66 KPFKKDFYVPHLDVEKRPESDVEAWR-SENEITLKGRNIPKPTLTFDEAGFPDYVMDEID 124
+PF+KDFYV ++ K + + +R S I ++G+N PKP T+ + G ++D +
Sbjct: 62 QPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKILDVLK 121
Query: 125 KMGFAKPTPIQAQGWPIALSGHDMVGIAST 154
K + KPTPIQAQ P+ +SG DM+ I T
Sbjct: 122 KNSYEKPTPIQAQAIPVIMSGRDMIAIVMT 151
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 150 bits (364), Expect = 2e-36
Identities = 89/195 (45%), Positives = 118/195 (60%), Gaps = 5/195 (2%)
Query: 120 MDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRG 179
+D + K GF PT IQ QG P+ALSG D++G A TGSGKTL++++P I + Q +S
Sbjct: 62 LDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPIIETLWRQKWTSM- 120
Query: 180 DGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAP-KGPQARDLDAGVEIVIAT 238
DG ALV++PTRELA Q EV K N + + GG K Q R + IV+ T
Sbjct: 121 DGLGALVISPTRELAYQTFEVLVKIGNKHDLSAGLIIGGKDLKNEQKRIMK--TNIVVCT 178
Query: 239 PGRLLDFL-ESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 297
PGRLL + E+ + LVLDEADR+LDMGF P + IIE + +RQTL++SAT
Sbjct: 179 PGRLLQHMDETPNFDCTSLQILVLDEADRILDMGFAPTLNAIIENLPSERQTLLYSATQT 238
Query: 298 REVQSLASEFLKDYL 312
R V+ LA L+ Y+
Sbjct: 239 RSVKDLARLSLQSYV 253
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 141 bits (342), Expect = 7e-34
Identities = 72/196 (36%), Positives = 119/196 (60%), Gaps = 8/196 (4%)
Query: 120 MDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSS-R 178
+D ++ G PIQA + G D++G A TG+GKTLS+ LP + + + S R
Sbjct: 85 IDNLEDRGITYLFPIQASTFNYIYDGEDVIGQARTGTGKTLSFALPLVEKLQDGKLSQKR 144
Query: 179 GDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIAT 238
G P LV+APTRELA+Q+ + + +++ C++GG P PQ +++G+++++ T
Sbjct: 145 GRAPKVLVMAPTRELAKQVGNEFENLKSNLEVY--CIYGGMPYEPQENAINSGLDVLVGT 202
Query: 239 PGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKII----EQIRPDR-QTLMWS 293
PGR+LDF+ G +L + ++VLDE DRMLDMGF + +++ + R D+ QTL++S
Sbjct: 203 PGRILDFMRQGTLDLSKLKHVVLDEVDRMLDMGFAESVEEVLAASYAEDREDKPQTLLFS 262
Query: 294 ATWPREVQSLASEFLK 309
AT P + A +++K
Sbjct: 263 ATLPPWAVNTAKKYMK 278
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 140 bits (339), Expect = 2e-33
Identities = 93/258 (36%), Positives = 132/258 (51%), Gaps = 10/258 (3%)
Query: 119 VMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSR 178
V DE + GF KP+ IQ + L G D++ A +G+GKT ++ + + I+ Q +
Sbjct: 10 VTDETE--GFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQLRE-- 65
Query: 179 GDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIAT 238
P ALVL+PTRELA QIQ+V + + GG G R LD G IV T
Sbjct: 66 ---PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGT 122
Query: 239 PGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPR 298
PGR+ D + + LVLDEAD ML+ GF+ QI + + P Q ++ SAT P
Sbjct: 123 PGRVFDMIRRRNLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLLSATLPH 182
Query: 299 EVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKT 358
E+ + S+F+ D ++I V +L I Q V +E E E K TL +
Sbjct: 183 EILEMTSKFMTDPIRILVKRDELTL-EGIKQFF-VAVERE-EWKFDTLCDLYDTLTITQA 239
Query: 359 IIFIETKRRVDDITRKMK 376
+IF TKR+VD +T KM+
Sbjct: 240 VIFCNTKRKVDWLTEKMR 257
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 137 bits (331), Expect = 2e-32
Identities = 88/301 (29%), Positives = 155/301 (51%), Gaps = 23/301 (7%)
Query: 88 EAWRSENEITLKGRNIPKPTLTFDEAG-FPDYVMDE-----IDKMGFAKPTPIQAQGWPI 141
E+W++ ++ K +T + F DY + I + GF KP+PIQ + P+
Sbjct: 21 ESWKANLKLPPKDNRFKTSDVTATKGNEFEDYCLKRELLMGIFEKGFDKPSPIQEESIPV 80
Query: 142 ALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVC 201
AL+G D++ A G+GKT +Y++P + + + ALVL PTRELA Q ++C
Sbjct: 81 ALAGRDILARAKNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQIC 135
Query: 202 DKFANTSKIHNTCLFGGAPKGPQA-----RDL--DAGVEIVIATPGRLLDFLESGRTNLK 254
+ GG +D+ V +++ATPGR+LD ++ ++
Sbjct: 136 IELGKHMGAQVMVTTGGTSLKDDILRLYNKDIFVHVVVHVIVATPGRVLDLMKKKLADMS 195
Query: 255 RCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDYLQI 314
+C LV+DEAD++L M F+ + +II+ + +RQ L++SAT+P V+ + L+ +I
Sbjct: 196 KCQMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILLFSATFPISVRDFKEKHLRKPYEI 255
Query: 315 NVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRK 374
N+ + H + Q E +K L+TL +++ N++IIF + +RV+ + RK
Sbjct: 256 NL--MDELTLHGVTQYYAFVEEKQKVHCLNTLFQKLQI---NQSIIFCNSVQRVELLARK 310
Query: 375 M 375
+
Sbjct: 311 I 311
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 137 bits (331), Expect = 2e-32
Identities = 88/301 (29%), Positives = 155/301 (51%), Gaps = 23/301 (7%)
Query: 88 EAWRSENEITLKGRNIPKPTLTFDEAG-FPDYVMDE-----IDKMGFAKPTPIQAQGWPI 141
E+W++ ++ K +T + F DY + I + GF KP+PIQ + P+
Sbjct: 21 ESWKANLKLPPKDNRFKTSDVTATKGNEFEDYCLKRELLMGIFEKGFDKPSPIQEESIPV 80
Query: 142 ALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVC 201
AL+G D++ A G+GKT +Y++P + + + ALVL PTRELA Q ++C
Sbjct: 81 ALAGRDILARAKNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQIC 135
Query: 202 DKFANTSKIHNTCLFGGAPKGPQA-----RDL--DAGVEIVIATPGRLLDFLESGRTNLK 254
+ GG +D+ V +++ATPGR+LD ++ ++
Sbjct: 136 IELGKHMGAQVMVTTGGTSLKDDILRLYNKDIFVHVVVHVIVATPGRVLDLMKKKLADMS 195
Query: 255 RCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDYLQI 314
+C LV+DEAD++L M F+ + +II+ + +RQ L++SAT+P V+ + L+ +I
Sbjct: 196 KCQMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILLFSATFPISVRDFKEKHLRKPYEI 255
Query: 315 NVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRK 374
N+ + H + Q E +K L+TL +++ N++IIF + +RV+ + RK
Sbjct: 256 NL--MDELTLHGVTQYYAFVEEKQKVHCLNTLFQKLQI---NQSIIFCNSVQRVELLARK 310
Query: 375 M 375
+
Sbjct: 311 I 311
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 129 bits (312), Expect = 3e-30
Identities = 86/239 (35%), Positives = 127/239 (53%), Gaps = 25/239 (10%)
Query: 78 DVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQ 137
++E+ E D +R + I+ KG IP P + EA PD +++ +DK+G+ PTPIQ Q
Sbjct: 71 NLEEMTERDWRIFREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQ 130
Query: 138 GWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGD----GPIALVLAPTREL 193
PI L D++G+A TGSGKT ++ +P +V I PK R + GP AL+LAPTREL
Sbjct: 131 AIPIGLQNRDIIGVAETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTREL 190
Query: 194 AQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNL 253
AQQI+E KF I + GGA R +D G E + ++L+ L +N+
Sbjct: 191 AQQIEEEILKFGRPLGIRTVSVIGGAD-----RMIDMGFEPEVQ---KILEHLPV--SNV 240
Query: 254 KRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDYL 312
K + D + MG + RQT+M++AT P +V+ LA +L+ L
Sbjct: 241 KPDSEDSEDPEHLLTHMGKDKY-----------RQTVMFTATMPPQVERLAKNYLRKKL 288
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 126 bits (303), Expect = 4e-29
Identities = 75/189 (39%), Positives = 110/189 (58%), Gaps = 4/189 (2%)
Query: 123 IDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINN-QPKSSRGDG 181
I MGF T IQ + L G D++G A TGSGKTL++++P + + Q K+ G G
Sbjct: 587 IKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVVELLYKLQFKTRNGTG 646
Query: 182 PIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGR 241
I +++PTREL+ Q V + GG + +A L GV ++IATPGR
Sbjct: 647 VI--IISPTRELSLQTYGVARDLLKHHNFTYGIIMGGVNRKAEAERLQKGVNLLIATPGR 704
Query: 242 LLDFLESGRTNL-KRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREV 300
LLD L++ + L K LV+DEADR+L++GFE ++R+II + RQT+++SAT + V
Sbjct: 705 LLDHLQNTQGFLYKNLQCLVIDEADRILEIGFEEEMRQIIRILPSKRQTVLFSATQTKNV 764
Query: 301 QSLASEFLK 309
+ LA LK
Sbjct: 765 EDLAKLSLK 773
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 126 bits (303), Expect = 4e-29
Identities = 80/234 (34%), Positives = 121/234 (51%), Gaps = 4/234 (1%)
Query: 143 LSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRG-DGPIALVLAPTRELAQQIQEVC 201
LS D++ A +G+GKT ++ + + I+ K G D ALVLAPTRELAQQIQ+V
Sbjct: 120 LSARDVIAQAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVV 179
Query: 202 DKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVL 261
+ + GG L+ GV +V+ TPGR+ D + G N + VL
Sbjct: 180 LALGDYMHVKCHACIGGTNVREDRMKLEEGVHVVVGTPGRVFDMINRGVLNTRDIKLFVL 239
Query: 262 DEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQL 321
DEAD ML GF+ QI + ++ Q ++ SAT P +V + ++F++D ++I V ++
Sbjct: 240 DEADEMLSRGFKDQIYDVFTRLPTSVQVVLLSATMPTDVLEVTNKFMRDVVRILVKREEV 299
Query: 322 AANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKM 375
I Q V +E E + KL TL + +IF T+R+VD + KM
Sbjct: 300 TL-EGIKQFF-VLVEKE-DWKLDTLCDLYETLTITQAVIFANTRRKVDWLAAKM 350
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 124 bits (299), Expect = 1e-28
Identities = 75/190 (39%), Positives = 102/190 (53%), Gaps = 6/190 (3%)
Query: 107 TLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPA 166
T +F G +++ + MG KPT IQ P L G D +G A TGSGKT ++ LP
Sbjct: 6 TCSFAGLGLNKWLVSQCVAMGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPI 65
Query: 167 IVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQAR 226
+ + + P G A+VL PTRELA QI + + + GG QA
Sbjct: 66 LQKLCDDPY-----GIFAVVLTPTRELAFQIADQFKVLGRPIGLKEAVIVGGLDMMKQAL 120
Query: 227 DLDAGVEIVIATPGRLLDFLESGRT-NLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP 285
L +VIATPGRL D ++S T NLK+ +LVLDEADR+LD F ++ I + +
Sbjct: 121 SLANKPHVVIATPGRLADHIKSTDTLNLKKIQFLVLDEADRLLDPSFGDDLKVIFDAVPE 180
Query: 286 DRQTLMWSAT 295
RQTL++SAT
Sbjct: 181 KRQTLLFSAT 190
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 99.1 bits (236), Expect = 5e-21
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 4/179 (2%)
Query: 109 TFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIV 168
+F G D V+ +D + +PT IQ P + H ++ A TGSGKTL+Y+ P +
Sbjct: 379 SFAGLGLRDDVLKALDALNIHQPTVIQMVTIPKIIHRHHVICAAQTGSGKTLAYLAPLVH 438
Query: 169 HINNQPKS----SRGDGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQ 224
+ + +R P A ++ P RELA QI + + ++ + L GG +
Sbjct: 439 RLREDEERHGILARLKRPRACIVVPARELATQILKTAKSLCHHARFRSVGLIGGRKQKWM 498
Query: 225 ARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQI 283
DL++ V++++ATPG LL + + R T+LV+DEAD M D F+ +I+ I
Sbjct: 499 RDDLESPVDLLVATPGTLLKYRQKDRLFFSDLTHLVIDEADTMFDASFKSLTMEILHTI 557
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 97.5 bits (232), Expect = 2e-20
Identities = 59/189 (31%), Positives = 97/189 (51%), Gaps = 9/189 (4%)
Query: 93 ENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIA 152
++E+ ++G + P+P LT + + F +Y ++G PT +Q WP L G D+ G+A
Sbjct: 176 QDEVLIQGESAPRPFLTMNNSTFYEYG----PRLGVTVPTSLQKHMWPSLLRGRDVAGVA 231
Query: 153 STGSGKTLSYILPAIVHINNQ---PKSSRGDGPIALVLAPTRELAQQIQEVC-DKFANTS 208
GSGK L+Y+LP I I + +GP+ L+L + ++ VC D N
Sbjct: 232 IEGSGKRLAYLLPIIHQITESSVYQELPLANGPLVLILCTNWQNTARVYGVCEDLIRNRR 291
Query: 209 KIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRML 268
+ +FGG + + L G E+++ATP L L+ T+L R ++V D+AD ML
Sbjct: 292 RTRVQMIFGGGAEEDRIVPLINGCEVLVATPPCFLRMLKRCYTSLDRLCHVVFDDAD-ML 350
Query: 269 DMGFEPQIR 277
F +I+
Sbjct: 351 AEYFTAEIK 359
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 94.7 bits (225), Expect = 1e-19
Identities = 54/130 (41%), Positives = 78/130 (60%), Gaps = 6/130 (4%)
Query: 147 DMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVCDKFAN 206
D++G+A TGSGKT ++ LP + + + P+ AL+L PTRELA QI E C+ +
Sbjct: 3 DVIGLAETGSGKTGAFALPILQALLDNPQRL-----FALILTPTRELAFQISEQCEALGS 57
Query: 207 TSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGR-TNLKRCTYLVLDEAD 265
+ + GG QA L I+IATPGRL+D LE+ + +L+ YLV+DEAD
Sbjct: 58 GIGVKCAVIVGGIDMMSQALMLAKKPHIIIATPGRLIDHLENTKGFSLRTLKYLVMDEAD 117
Query: 266 RMLDMGFEPQ 275
R+L+M FE +
Sbjct: 118 RILNMDFEKE 127
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 91.1 bits (216), Expect = 1e-18
Identities = 66/194 (34%), Positives = 94/194 (48%), Gaps = 20/194 (10%)
Query: 80 EKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGW 139
EK D E ++ +KG I P ++ G ++ + GF+KPTPIQ+
Sbjct: 107 EKEKGGDAEGLSNQK---VKGSLIDMPE--WEGLGVAPDILRALGDQGFSKPTPIQSLSI 161
Query: 140 PIALSGH-DMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGP--------------IA 184
P AL H D++G A TGSGKTL++ +P I HI K P +A
Sbjct: 162 PPALLYHRDIIGAAETGSGKTLAFGIPIIQHIEAYKKRKAEQSPSDKESDLESQGYPLLA 221
Query: 185 LVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLD 244
L++APTRELA Q+++ K A + + + GG Q R L EIV+ATPGRL +
Sbjct: 222 LIMAPTRELALQVKDHLVKAAKYTSVKVAAIVGGMAAPKQQRLLKQRPEIVVATPGRLWE 281
Query: 245 FLESGRTNLKRCTY 258
+ T+ K Y
Sbjct: 282 LISQVFTHGKPLLY 295
Score = 35.5 bits (78), Expect = 0.072
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 230 AGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQT 289
A V +V+ + E +N++ YLV+DEADRM++ G ++ I+E I +
Sbjct: 314 AVVVVVVVVVDTSVTNQEKHVSNIQLLRYLVIDEADRMVEQGHYEELSSILELIHLKKSG 373
Query: 290 LMWSATWPREVQSLASEFLKDYLQINV 316
M E S +S K Y+Q N+
Sbjct: 374 NMEVDQEDAERPSNSSS-EKRYIQRNI 399
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 87.4 bits (207), Expect = 2e-17
Identities = 73/278 (26%), Positives = 130/278 (46%), Gaps = 20/278 (7%)
Query: 109 TFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGH--DMVGIASTGSGKTLSYILPA 166
+F+E + + MGF KP+ IQ P+ L+ +M+ + +G+GKT +++L
Sbjct: 104 SFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVNMIAQSQSGTGKTAAFVLTM 163
Query: 167 IVHINNQPKSSRGDGPIALVLAPTRELAQQ---IQEVCDKFANTSKIHNTCLFGGAPKGP 223
+ ++ + P + L+PT ELA+Q + E K KI+ P+G
Sbjct: 164 LSRVD-----ATKPYPQVICLSPTYELARQTGKVAEAMGKHCPHIKINYAVRGNQFPRGQ 218
Query: 224 QARDLDAGVEIVIATPGRLLDFLESGRT-NLKRCTYLVLDEADRMLDM-GFEPQIRKIIE 281
+ D I+I TPG LLD++ + ++ + VLDEAD M+ + G + Q +I +
Sbjct: 219 KCTD-----HIIIGTPGTLLDWIRKSKCFEPRKVSVFVLDEADIMIALQGHQDQSIRIHK 273
Query: 282 QIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKET 341
+ D Q L++SAT+ +V A + + + I + + + + NI Q VC E
Sbjct: 274 SLHKDCQVLLFSATYDEDVMKFAETVVPNPIIIRLRREEESLD-NIKQYYVVCK--NSED 330
Query: 342 KLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDG 379
K L + ++F T+R + KM ++G
Sbjct: 331 KFEALCNMYGVLSIGQCVVFCHTRRNAAWLAEKMVKEG 368
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 87.0 bits (206), Expect = 2e-17
Identities = 52/202 (25%), Positives = 103/202 (50%), Gaps = 9/202 (4%)
Query: 123 IDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGP 182
+++ GF KP+PIQ + P+ G D++ A +G+GKT + + A+ ++ + +
Sbjct: 28 LNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTGKTCVFSVIALENVITESNCIQ---- 83
Query: 183 IALVLAPTRELAQQIQEV-CDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGR 241
++L PTRE+A Q+++V C + + GG + L + I + TPGR
Sbjct: 84 -IIILTPTREIAVQVKDVICAIGCHYDGLACKVFIGGISLEEDKKALKS-CHIAVGTPGR 141
Query: 242 LLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQ 301
+ +E + +LDEAD++LD F+ QI I + ++Q + +SAT+P +
Sbjct: 142 VKYLIEQKYLKTESVRMFILDEADKLLDESFQQQINWIFSALPENKQMMAFSATYPEVLA 201
Query: 302 SLASEFLKD--YLQINVGSLQL 321
+ +++ + ++++N L
Sbjct: 202 NHLKKYMTEPTFVRLNAADPSL 223
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 86.2 bits (204), Expect = 4e-17
Identities = 45/149 (30%), Positives = 86/149 (57%), Gaps = 2/149 (1%)
Query: 229 DAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 288
+ GV++++ATPGR+++ + +L V+DE D ML +GFE Q+++I+E++ RQ
Sbjct: 253 EMGVQVIVATPGRMVEIISRQAVDLTHVIGCVVDEVDTMLQLGFEQQVQQILERLSNRRQ 312
Query: 289 TLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLK 348
T+++SAT P ++++AS L + I+ GS L + Q+I E K+ +L ++LK
Sbjct: 313 TMLFSATIPPSIEAMASRLLNAPVFISAGSPSLPTK-AVKQLILWVEEKSKKKQLFSILK 371
Query: 349 EIMAEKENKTIIFIETKRRVDDITRKMKR 377
+ ++F+E+K D + + +
Sbjct: 372 D-SRHFNPPAVVFVESKLGADMLAEAVSK 399
Score = 63.3 bits (147), Expect = 3e-10
Identities = 32/88 (36%), Positives = 45/88 (51%)
Query: 73 YVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPT 132
Y H + V+ R + EI +KG ++ P L F F + + + G+ PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 133 PIQAQGWPIALSGHDMVGIASTGSGKTL 160
PIQ Q P+ LSG D++ ASTGSGK L
Sbjct: 221 PIQMQVLPVLLSGRDVMVCASTGSGKLL 248
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 74.5 bits (175), Expect = 1e-13
Identities = 55/190 (28%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 83 PESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIA 142
P +A + + + +KG + + F + ++ I GF P+ +Q + P A
Sbjct: 22 PAEGAQAIKDQAKKDVKGTYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQA 81
Query: 143 LSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIA-LVLAPTRELAQQIQEVC 201
+ G D++ A +G GKT ++L + + +P DG ++ LV+ TRELA QI +
Sbjct: 82 ILGMDIICQAKSGMGKTAVFVLATLQQL--EPV----DGQVSVLVMCHTRELAFQIHKEY 135
Query: 202 DKFAN-TSKIHNTCLFGGAPKGPQARDLDAGV-EIVIATPGRLLDFLESGRTNLKRCTYL 259
++F S I FGG + L IV+ TPGR+L NLK +
Sbjct: 136 ERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCPHIVVGTPGRILALTREKTLNLKHAKHF 195
Query: 260 VLDEADRMLD 269
+LDE D+ML+
Sbjct: 196 ILDECDKMLE 205
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 74.5 bits (175), Expect = 1e-13
Identities = 55/190 (28%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 83 PESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIA 142
P +A + + + +KG + + F + ++ I GF P+ +Q + P A
Sbjct: 22 PAEGAQAIKDQAKKDVKGTYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQA 81
Query: 143 LSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIA-LVLAPTRELAQQIQEVC 201
+ G D++ A +G GKT ++L + + +P DG ++ LV+ TRELA QI +
Sbjct: 82 ILGMDIICQAKSGMGKTAVFVLATLQQL--EPV----DGQVSVLVMCHTRELAFQIHKEY 135
Query: 202 DKFAN-TSKIHNTCLFGGAPKGPQARDLDAGV-EIVIATPGRLLDFLESGRTNLKRCTYL 259
++F S I FGG + L IV+ TPGR+L NLK +
Sbjct: 136 ERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCPHIVVGTPGRILALTREKTLNLKHAKHF 195
Query: 260 VLDEADRMLD 269
+LDE D+ML+
Sbjct: 196 ILDECDKMLE 205
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 72.9 bits (171), Expect = 4e-13
Identities = 35/80 (43%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 252 NLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDY 311
N+ YLVLDEADRM+DMGFE +R I + RQTL++SAT P+++Q+ A L
Sbjct: 13 NVSPYRYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKP 72
Query: 312 LQINVGSLQLAANHNILQII 331
+ +NVG AA+ +++Q++
Sbjct: 73 VTVNVGRAG-AASLDVIQVL 91
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 72.9 bits (171), Expect = 4e-13
Identities = 35/80 (43%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 252 NLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDY 311
N+ YLVLDEADRM+DMGFE +R I + RQTL++SAT P+++Q+ A L
Sbjct: 13 NVSPYRYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKP 72
Query: 312 LQINVGSLQLAANHNILQII 331
+ +NVG AA+ +++Q++
Sbjct: 73 VTVNVGRAG-AASLDVIQVL 91
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 70.9 bits (166), Expect = 2e-12
Identities = 80/311 (25%), Positives = 137/311 (44%), Gaps = 46/311 (14%)
Query: 80 EKRPESDVEAWRSENEITLKGRNIPKPTLTFDEA----GFPDYVMDEIDKMGFAKPTPIQ 135
EK E + +R E I +KG ++P P TF + GFPDY++ + + G+ TP
Sbjct: 132 EKHQEK-INLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYT--TPT- 187
Query: 136 AQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLAPTRELAQ 195
PI + P + H PK S G A+V++PTRELAQ
Sbjct: 188 ----PIQMQA------------------TPLMAH---GPKKS---GFRAVVVSPTRELAQ 219
Query: 196 QI-QEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFL--ESGRTN 252
QI +E C + + A +I++ TP RL+ L E
Sbjct: 220 QIYREFCHLAKGCAFRIHVLTKANASTNTFGAKSSKRFDILVTTPNRLVHLLTQEPPGIE 279
Query: 253 LKRCTYLVLDEADRMLDM---GFEPQIRKIIEQI-RPDRQTLMWSATWPREVQSLASEFL 308
L +L+LDEAD++ + GF QI I + +PD ++SAT ++ A L
Sbjct: 280 LHNVEWLILDEADKLFEEGKDGFREQIATIYQACNKPDIHRGLFSATLSNGIEEWAGLHL 339
Query: 309 KDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRV 368
+++++ VG ++ +A + Q ++ ++ KL + + +IF+++K R
Sbjct: 340 DNHVRVTVG-IRNSATATVDQ--ELLFVGQESGKLLAVRDIVQKGFTPPVLIFVQSKDRA 396
Query: 369 DDITRKMKRDG 379
++ ++ DG
Sbjct: 397 KELFHELIYDG 407
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 67.7 bits (158), Expect = 1e-11
Identities = 33/70 (47%), Positives = 48/70 (68%), Gaps = 4/70 (5%)
Query: 270 MGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNILQ 329
MGFEP+I+KI+ IRPDRQT+M SATWP VQ +A +++ D +++ VG L L N+++
Sbjct: 1 MGFEPEIKKILLDIRPDRQTVMTSATWPPGVQRMADQYMTDPVRVFVGCLDL----NVIE 56
Query: 330 IIDVCMEYEK 339
I+ EK
Sbjct: 57 FIEGMAPGEK 66
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 65.7 bits (153), Expect = 6e-11
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 14/163 (8%)
Query: 110 FDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVH 169
F G +++++ KMG KP PIQ + P S ++ + TG+GK+L ++LP++
Sbjct: 162 FSNFGVHPKLVEKLKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVFLLPSV-- 219
Query: 170 INNQPKSSRGDGPIALVLAPTRELA-QQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDL 228
P RG G I ++ PTRELA Q + EV + S + G Q + L
Sbjct: 220 --QDP--GRGYGTI--IVVPTRELASQMLYEVSRLLGDKSIV--ASFVSGVDLSRQEKLL 271
Query: 229 DAGV---EIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRML 268
+ IVI TP RL + ++ +R +V+DE D+ L
Sbjct: 272 KDSLHPPRIVIGTPKRLWEIVQEHEHLFQRTKRIVIDEVDKTL 314
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 65.7 bits (153), Expect = 6e-11
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 17/127 (13%)
Query: 140 PIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLAPTRELAQQIQE 199
P+ + G D+V +A TGSGKT ++++P + G AL+L+PTRELA Q Q+
Sbjct: 313 PLVMDGKDVVAMARTGSGKTAAFLIPMFEKLQTHTAKV---GIRALILSPTRELALQTQK 369
Query: 200 VCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYL 259
+ + + ++ + GG + V+ATPGR L + L Y+
Sbjct: 370 FIKELGRFTGLKSSVILGG--------------DSVVATPGRFLHVVMEMELKLSSVEYV 415
Query: 260 VLDEADR 266
V DEADR
Sbjct: 416 VFDEADR 422
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 63.7 bits (148), Expect = 2e-10
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 123 IDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGP 182
++++GF PTPIQA P+AL G D+ A+TG+GKT +++LP + + +P S
Sbjct: 25 VNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFMLPILERLLYRPTQS--PAI 82
Query: 183 IALVLAPTRELAQQ 196
LV+ PTRELA Q
Sbjct: 83 RVLVITPTRELAIQ 96
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 61.3 bits (142), Expect = 1e-09
Identities = 30/71 (42%), Positives = 48/71 (67%)
Query: 259 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGS 318
LVLDEADRMLDMGF IR+++ ++ RQ L++SAT+ ++++LA + L + L+I V
Sbjct: 7 LVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVAR 66
Query: 319 LQLAANHNILQ 329
A++ + Q
Sbjct: 67 RNTASDQVLQQ 77
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 53.2 bits (122), Expect = 3e-07
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 95 EITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIAST 154
E+ + G N + +F+EA + ++ + K + KPTP+Q PI ++G D++ A T
Sbjct: 121 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQT 180
Query: 155 GSGKT 159
GSGKT
Sbjct: 181 GSGKT 185
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 50.8 bits (116), Expect = 2e-06
Identities = 28/61 (45%), Positives = 33/61 (54%)
Query: 182 PIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGR 241
P ALVL+PTRELA QIQ+V + + GG G R LD G IV TPGR
Sbjct: 4 PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGR 63
Query: 242 L 242
+
Sbjct: 64 V 64
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 44.4 bits (100), Expect = 2e-04
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 232 VEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQI 283
V+IV TPG+L DF+ + + +L + + +LDEAD +L G I KI +I
Sbjct: 136 VDIVTGTPGKLNDFITTDKISLHQVKFFILDEADGLLAQGNNDLIMKIYNKI 187
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 39.5 bits (88), Expect = 0.004
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 11/102 (10%)
Query: 270 MGFEPQIRKIIEQIRPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHNI-- 327
MGFE I I+ + R+T ++SAT EV++L L++ +++ V +L N+
Sbjct: 1 MGFEASINTILGYLPKQRRTGLFSATQTDEVEALVRAGLRNPVRVTVRE-KLTKTKNVQR 59
Query: 328 ----LQ-IIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIET 364
LQ +C +EK ++L LK A K+ K ++F T
Sbjct: 60 TPSTLQNFYLICRSHEKFSQLVAFLK---ARKDKKNMVFFST 98
>SB_51385| Best HMM Match : DEAD (HMM E-Value=0.00031)
Length = 127
Score = 38.3 bits (85), Expect = 0.010
Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 147 DMVGIASTGSGKTLSY-ILPAIVHINNQPKSSRGDGPIALVLAPTRELAQ-QIQEVCDKF 204
D++ + TG GK+L + +LPA++H ++ G+ P+ ++++P L + QI + +
Sbjct: 18 DVLAVLPTGYGKSLVFHLLPALLHKQRLLRNVSGNPPVVIIISPLSSLIRDQISRLPSER 77
Query: 205 ANTSKIHNTCLFGGAPKGPQARDLD-AGVEIVIATPGRLLDFLESGRTN 252
A + T G + + L+ G E + PG F +TN
Sbjct: 78 ATQLRRSETSEVGDEFRDCEKSKLENGGYEFLFCPPGGSDFFAIRTKTN 126
>SB_34740| Best HMM Match : DEAD (HMM E-Value=0.00031)
Length = 233
Score = 38.3 bits (85), Expect = 0.010
Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 147 DMVGIASTGSGKTLSY-ILPAIVHINNQPKSSRGDGPIALVLAPTRELAQ-QIQEVCDKF 204
D++ + TG GK+L + +LPA++H ++ G+ P+ ++++P L + QI + +
Sbjct: 124 DVLAVLPTGYGKSLVFHLLPALLHKQRLLRNVSGNPPVVIIISPLSSLIRDQISRLPSER 183
Query: 205 ANTSKIHNTCLFGGAPKGPQARDLD-AGVEIVIATPGRLLDFLESGRTN 252
A + T G + + L+ G E + PG F +TN
Sbjct: 184 ATQLRRSETSEVGDEFRDCEKSKLENGGYEFLFCPPGGSDFFAIRTKTN 232
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 36.3 bits (80), Expect = 0.041
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 112 EAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHIN 171
E P V + ++GF+ Q Q LSG + + STG+GK+L Y LPA ++
Sbjct: 506 ETETPPEVYKALGQLGFSSFRAGQEQAVMRILSGMSSLVVLSTGAGKSLCYQLPAYMYHK 565
Query: 172 NQP 174
P
Sbjct: 566 RSP 568
>SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 51
Score = 33.9 bits (74), Expect = 0.22
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 251 TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQI 283
+N++ YLV+DEADRM++ G ++ I+E I
Sbjct: 6 SNVQLLRYLVIDEADRMVEQGHYEELSSILELI 38
>SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 33.9 bits (74), Expect = 0.22
Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 3/122 (2%)
Query: 142 ALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLAPTRELAQQIQEVC 201
AL GH+ V A T SGKT + A H++ + K +G + L + T L QQ E
Sbjct: 300 ALEGHNTVICAPTNSGKTYVALNIARNHLDKK-KEQEQEGKV-LFIVSTVNLVQQQTERF 357
Query: 202 DKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVL 261
+ I P + L + +V+ T L++ L+ G L + LV
Sbjct: 358 KLYLQDKYIVKDISGSNGCDIPLSGLLGSS-HVVVLTAQILVNALKDGSLQLSSVSLLVF 416
Query: 262 DE 263
DE
Sbjct: 417 DE 418
>SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 33.9 bits (74), Expect = 0.22
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 116 PDYVMDEIDKMGFAKPTPIQAQGWPIALSGH-DMVGIAST 154
PD ++ + GF+KPTPIQ+ P AL H D++G A T
Sbjct: 81 PD-ILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAET 119
>SB_51441| Best HMM Match : DEAD (HMM E-Value=4.9e-19)
Length = 304
Score = 32.7 bits (71), Expect = 0.51
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 104 PKPTLTFDEAGFPDYVMDEIDKM-GFAKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSY 162
P T + G D + + + G+ P+Q Q L+ D + + TG+GKT+ Y
Sbjct: 112 PINTANIETDGSDDRALHALQHVFGYIDFRPMQRQAIDTLLAEKDSLILLPTGAGKTICY 171
Query: 163 ILPAIV 168
+PA++
Sbjct: 172 AIPALL 177
>SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8)
Length = 210
Score = 32.3 bits (70), Expect = 0.67
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 259 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 288
LVLDEAD ML+ GF+ QI + + P Q
Sbjct: 39 LVLDEADEMLNKGFKEQIYDVYRYLPPATQ 68
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 30.3 bits (65), Expect = 2.7
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 212 NTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESG 249
+ C+ GG L+ GV +V+ TPGR+ D + G
Sbjct: 6 HACI-GGTNVREDRMKLEEGVHVVVGTPGRVFDMINRG 42
>SB_50927| Best HMM Match : DEAD (HMM E-Value=3.2e-06)
Length = 368
Score = 29.5 bits (63), Expect = 4.7
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 230 AGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEA-DRMLDMGFEPQIRKIIEQIRPDRQ 288
+ ++ T G LL + ES T L +++V+DE +R + F + + + RPD +
Sbjct: 68 SSTRLLYCTTGILLRYFESDST-LAGVSHVVVDEVHERTEESDFLMMVLRDLIMERPDLR 126
Query: 289 TLMWSATWPREVQSLASEFLKDYLQINV 316
++ SAT L SE+ D I++
Sbjct: 127 VILMSATLD---SKLFSEYFYDAPVIHI 151
>SB_47730| Best HMM Match : Ion_trans (HMM E-Value=1e-14)
Length = 904
Score = 29.5 bits (63), Expect = 4.7
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 8/75 (10%)
Query: 136 AQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGDGPIALVLAPTRELAQ 195
+Q WP H + +G S LP ++H + + +SS L PT +A
Sbjct: 608 SQQWP-----HTCTPTSDATNGLPASLSLPTVIHTSARSRSSSSSSASLLTPIPTSSIAL 662
Query: 196 QIQEVCDKFANTSKI 210
Q E ANT +I
Sbjct: 663 QYHE---SRANTPRI 674
>SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32)
Length = 651
Score = 29.5 bits (63), Expect = 4.7
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 143 LSGHDMVGIASTGSGKTLSYILPAIV 168
+SG D + I TG GK+L + LPA+V
Sbjct: 102 MSGVDCILIMPTGGGKSLCFQLPAVV 127
>SB_8488| Best HMM Match : Kelch_1 (HMM E-Value=3.3e-13)
Length = 485
Score = 29.5 bits (63), Expect = 4.7
Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 53 ASLRKPKWDLSRLKPFKKDFYVPHLDVEKR-PESDVEAWRSENEITLKGRNIPKPTLTFD 111
ASL P+W L + KK F V D + R P VE + N+ + + + + F
Sbjct: 225 ASLTTPRWGLGAVVLNKKIFAVGGFDTDNRAPIGTVEVYSPRNDTWTQIKPLNRARRRFG 284
Query: 112 EAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIAST 154
A D+ + +I K + + GH+ IAS+
Sbjct: 285 IAEVDDHKLRKIFNRNTIKISYSCMSNTKQIIDGHNKRIIASS 327
>SB_55048| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 27
Score = 29.1 bits (62), Expect = 6.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Query: 227 DLDAGVEIVIATPGRLLDFL 246
+L G EI++ TPGR++D L
Sbjct: 3 ELKRGAEIIVCTPGRMIDML 22
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.136 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,239,410
Number of Sequences: 59808
Number of extensions: 466450
Number of successful extensions: 1086
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 979
Number of HSP's gapped (non-prelim): 63
length of query: 379
length of database: 16,821,457
effective HSP length: 83
effective length of query: 296
effective length of database: 11,857,393
effective search space: 3509788328
effective search space used: 3509788328
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
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