GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001336-TA|BGIBMGA001336-PA|IPR014001|DEAD-like
helicases, N-terminal, IPR000629|ATP-dependent helicase, DEAD-box,
IPR014021|Helicase superfamily 1 and 2 ATP-binding, IPR014014|DEAD-box
RNA helicase Q motif, IPR013957|Protein of unknown function DUF1777,
IPR011545|DEAD/DEAH box helicase, N-terminal
         (379 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...   199   9e-53
AJ278310-1|CAB93496.1|  219|Anopheles gambiae serine protease-li...    27   1.1  
AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding pr...    25   2.6  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   4.6  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score =  199 bits (486), Expect = 9e-53
 Identities = 110/289 (38%), Positives = 168/289 (58%), Gaps = 10/289 (3%)

Query: 93  ENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIA 152
           E ++ + G N P    +F+ +G  + VM  + K  + KPTPIQ    PI L+G D++  A
Sbjct: 159 EIQVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACA 218

Query: 153 STGSGKTLSYILPAIVHINNQPKSS--RGDGPIALVLAPTRELAQQIQEVCDKFANTSKI 210
            TGSGKT +++LP I H+ ++  S   R   P  +++APTRELA QI +   KFA+ +K+
Sbjct: 219 QTGSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKL 278

Query: 211 HNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDM 270
                +GG     Q + +  G  +++ATPGRLLDF++ G    +   ++VLDEADRMLDM
Sbjct: 279 KVCVSYGGTAVQHQLQLMRGGCHVLVATPGRLLDFIDRGYVTFENVNFVVLDEADRMLDM 338

Query: 271 GFEPQIRKIIEQI----RPDRQTLMWSATWPREVQSLASEFLKDYLQINVGSLQLAANHN 326
           GF P I K++       +  RQTLM+SAT+P E+Q LA +FL +Y+ + VG +   A  +
Sbjct: 339 GFLPSIEKVMGHATMPEKQQRQTLMFSATFPAEIQELAGKFLHNYICVFVGIVG-GACAD 397

Query: 327 ILQIIDVCMEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKM 375
           + Q I +  +++K  KL  +L          T++F+ETKR  D +   M
Sbjct: 398 VEQTIHLVEKFKKRKKLEEILN---GGNPKGTLVFVETKRNADYLASLM 443


>AJ278310-1|CAB93496.1|  219|Anopheles gambiae serine protease-like
           protein protein.
          Length = 219

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 14/67 (20%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 183 IALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRL 242
           I L + P  E  + ++    +     K+H++ +  G  KG      D G  ++   PG +
Sbjct: 111 IELPIMPNEECQKALRTT--RLGRRFKLHSSFICAGGEKGRDTCKGDGGSPLICPIPGSV 168

Query: 243 LDFLESG 249
             + ++G
Sbjct: 169 NHYYQAG 175


>AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding
           protein AgamOBP44 protein.
          Length = 327

 Score = 25.4 bits (53), Expect = 2.6
 Identities = 15/60 (25%), Positives = 22/60 (36%)

Query: 198 QEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPGRLLDFLESGRTNLKRCT 257
           Q  CDK +     H  CL G   KG  +  + A  +I +      +     GR     C+
Sbjct: 237 QSGCDKCSEVYNTHTECLSGLGEKGYTSGIITAAAKIALTNLCPAVALSYGGRKPSSTCS 296


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.6 bits (51), Expect = 4.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)

Query: 194  AQQIQEVCDKFANTSKIHNT 213
            A Q QE+C KF    K+H T
Sbjct: 2119 ALQRQELCKKFVEIGKVHLT 2138


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.136    0.402 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 338,535
Number of Sequences: 2123
Number of extensions: 14772
Number of successful extensions: 41
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 33
Number of HSP's gapped (non-prelim): 5
length of query: 379
length of database: 516,269
effective HSP length: 65
effective length of query: 314
effective length of database: 378,274
effective search space: 118778036
effective search space used: 118778036
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 49 (23.8 bits)