Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001335-TA|BGIBMGA001335-PA|IPR001269|Dihydrouridine
synthase, DuS
(591 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 25 1.5
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 4.5
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 4.5
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 4.5
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 4.5
AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 23 4.5
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 23 4.5
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 23 5.9
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 23 7.8
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 23 7.8
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 23 7.8
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 25.0 bits (52), Expect = 1.5
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 458 GVMIGRGALIKP---WIFNEIKEQKIWDISSKDRFEILKKYSNYGLE--HWGSDTQGVES 512
GV+ G + P W K+ KI +S+ LKKY+NY +E + S GV +
Sbjct: 1131 GVIKGYKVIYGPSDTWFDENTKDTKI-TAASETILHGLKKYTNYSMEVLAYTSGGDGVRT 1189
Query: 513 T 513
T
Sbjct: 1190 T 1190
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.4 bits (48), Expect = 4.5
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 41 SFDDNNLEFKKTKIEITEDKNDS-KTKKRGQNKSRPKIFKDGKES 84
S+ + KKTK E+ E+K + + K++ + KS + G S
Sbjct: 1058 SWGTREVAVKKTKKELEEEKKQAEEAKRKAKQKSLLGFLQSGGTS 1102
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.4 bits (48), Expect = 4.5
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 41 SFDDNNLEFKKTKIEITEDKNDS-KTKKRGQNKSRPKIFKDGKES 84
S+ + KKTK E+ E+K + + K++ + KS + G S
Sbjct: 1058 SWGTREVAVKKTKKELEEEKKQAEEAKRKAKQKSLLGFLQSGGTS 1102
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 23.4 bits (48), Expect = 4.5
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 41 SFDDNNLEFKKTKIEITEDKNDS-KTKKRGQNKSRPKIFKDGKES 84
S+ + KKTK E+ E+K + + K++ + KS + G S
Sbjct: 1058 SWGTREVAVKKTKKELEEEKKQAEEAKRKAKQKSLLGFLQSGGTS 1102
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 23.4 bits (48), Expect = 4.5
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 41 SFDDNNLEFKKTKIEITEDKNDS-KTKKRGQNKSRPKIFKDGKES 84
S+ + KKTK E+ E+K + + K++ + KS + G S
Sbjct: 1058 SWGTREVAVKKTKKELEEEKKQAEEAKRKAKQKSLLGFLQSGGTS 1102
>AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain
transcription factor Fushitarazu protein.
Length = 290
Score = 23.4 bits (48), Expect = 4.5
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 229 DLIKLLPRERKTIDWNNKLYLSPLTTVGNLP 259
D + L P E D N PLT + N+P
Sbjct: 254 DFLSLHPAETSMNDANRNDCAKPLTQIRNIP 284
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 23.4 bits (48), Expect = 4.5
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 229 DLIKLLPRERKTIDWNNKLYLSPLTTVGNLP 259
D + L P E D N PLT + N+P
Sbjct: 254 DFLSLHPAETSMNDVNRNDCAKPLTQIRNIP 284
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 23.0 bits (47), Expect = 5.9
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 442 SYEDYVEMRKIAPTVKGVMIGRG 464
SY+D E+R+ + VK + +G G
Sbjct: 2636 SYDDIAEIRRKSRLVKALKLGGG 2658
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 22.6 bits (46), Expect = 7.8
Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 3 NSNAGVCAIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKND 62
N++ G ++ K +IEE S + E L S N K+E + +
Sbjct: 143 NNSNGASSVGSSSPFDK--LIEEDSRSNEDTSLHPSPRITKKANSV--SVKVENRRNSPN 198
Query: 63 SKTKKRGQNKSRPKIFKDGKESKPCP 88
S KK G +K PK +D K P
Sbjct: 199 SCEKKIGLSKISPKESQDAANVKLSP 224
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 22.6 bits (46), Expect = 7.8
Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 3 NSNAGVCAIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKND 62
N++ G ++ K +IEE S + E L S N K+E + +
Sbjct: 91 NNSNGASSVGSSSPFDK--LIEEDSRSNEDTSLHPSPRITKKANSV--SVKVENRRNSPN 146
Query: 63 SKTKKRGQNKSRPKIFKDGKESKPCP 88
S KK G +K PK +D K P
Sbjct: 147 SCEKKIGLSKISPKESQDAANVKLSP 172
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 22.6 bits (46), Expect = 7.8
Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 3 NSNAGVCAIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKND 62
N++ G ++ K +IEE S + E L S N K+E + +
Sbjct: 274 NNSNGASSVGSSSPFDK--LIEEDSRSNEDTSLHPSPRITKKANSV--SVKVENRRNSPN 329
Query: 63 SKTKKRGQNKSRPKIFKDGKESKPCP 88
S KK G +K PK +D K P
Sbjct: 330 SCEKKIGLSKISPKESQDAANVKLSP 355
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.317 0.135 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,525
Number of Sequences: 317
Number of extensions: 6675
Number of successful extensions: 18
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 11
length of query: 591
length of database: 114,650
effective HSP length: 61
effective length of query: 530
effective length of database: 95,313
effective search space: 50515890
effective search space used: 50515890
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 46 (22.6 bits)
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