Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001335-TA|BGIBMGA001335-PA|IPR001269|Dihydrouridine
synthase, DuS
(591 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 322 4e-88
SB_34561| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 1e-05
SB_8162| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.003
SB_41483| Best HMM Match : Dus (HMM E-Value=1.9) 38 0.023
SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07) 36 0.069
SB_28346| Best HMM Match : BOP1NT (HMM E-Value=8.2e-14) 34 0.28
SB_54268| Best HMM Match : Vicilin_N (HMM E-Value=0.077) 33 0.49
SB_45935| Best HMM Match : Aldolase_II (HMM E-Value=1.1e-27) 33 0.49
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 33 0.49
SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.49
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 33 0.65
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 33 0.85
SB_28852| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.1
SB_4521| Best HMM Match : TPR_2 (HMM E-Value=1.7e-13) 32 1.1
SB_31796| Best HMM Match : SAP (HMM E-Value=3.5e-10) 32 1.1
SB_22046| Best HMM Match : PPV_E1_N (HMM E-Value=0.61) 32 1.1
SB_56890| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.5
SB_16296| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.5
SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29) 31 2.0
SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.0
SB_12740| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.0
SB_1789| Best HMM Match : RICH (HMM E-Value=1.6) 31 2.6
SB_39473| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.6
SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.6
SB_58037| Best HMM Match : DUF750 (HMM E-Value=1.8) 31 3.4
SB_38444| Best HMM Match : TMS_TDE (HMM E-Value=0) 31 3.4
SB_25946| Best HMM Match : Pterin_bind (HMM E-Value=2) 31 3.4
SB_23567| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00019) 31 3.4
SB_21874| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.4
SB_4416| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.4
SB_52452| Best HMM Match : Borrelia_orfA (HMM E-Value=1.3) 31 3.4
SB_41880| Best HMM Match : TolA (HMM E-Value=2.2) 31 3.4
SB_38348| Best HMM Match : Ank (HMM E-Value=8.7) 31 3.4
SB_55587| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.13) 30 4.6
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.6
SB_57515| Best HMM Match : CBFNT (HMM E-Value=3.3) 30 4.6
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.6
SB_15549| Best HMM Match : ADH_zinc_N (HMM E-Value=9.4e-13) 30 4.6
SB_56950| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.0
SB_2521| Best HMM Match : Ank (HMM E-Value=8.7) 30 6.0
SB_58746| Best HMM Match : RA (HMM E-Value=0.85) 30 6.0
SB_56456| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.0
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032) 30 6.0
SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.0
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.0
SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.0
SB_35674| Best HMM Match : SH2 (HMM E-Value=0) 29 8.0
SB_33949| Best HMM Match : TFIIB (HMM E-Value=0.0018) 29 8.0
SB_27034| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.0
SB_12099| Best HMM Match : DUF1220 (HMM E-Value=4.3) 29 8.0
SB_6206| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.0
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 322 bits (792), Expect = 4e-88
Identities = 164/290 (56%), Positives = 202/290 (69%), Gaps = 43/290 (14%)
Query: 305 QICGNNPYIITKVAQLLQENTELDFIDLNIGCPIDLIYKKGGGSGMMHRLPALETSVRCA 364
++CG P +TK A+LLQ+ T++DFID+N GCPIDL++
Sbjct: 208 RLCGAFPDTMTKCAELLQKETDVDFIDINTGCPIDLVF---------------------- 245
Query: 365 SKLLSIPFTVKMRTGVYQDKKIT---HTIVPKMSNWGASLITVHGRSREARYTKSSDWEY 421
+K++ IP TVK+R G++ DKK T H +V + +WG ++T+HGRSRE RYTKS+DW+Y
Sbjct: 246 NKVIDIPLTVKIRAGIH-DKKYTWNAHKLVGNLRDWGTDMVTIHGRSREQRYTKSADWDY 304
Query: 422 IETCAQAATPCPVYGNGDIFSYEDYVEMRKIAPTVKGVMIGRGALIKPWIFNEIKEQKIW 481
I A+ A+P PV+GNGDI S+ED ++ RK A V GVMI R W
Sbjct: 305 ISEVAKLASPMPVFGNGDILSFEDAMQHRKQAG-VAGVMIARH----------------W 347
Query: 482 DISSKDRFEILKKYSNYGLEHWGSDTQGVESTRRFLLEWLSFLYRYVPVGLLERPPQRIN 541
DISS +R +IL+++ N GLEHWGSDTQGVE TRRFLLEWLSF RYVPVGLLER PQRIN
Sbjct: 348 DISSSERLDILRQFVNAGLEHWGSDTQGVEKTRRFLLEWLSFTCRYVPVGLLERLPQRIN 407
Query: 542 ERPPTYFGRDDLETLMASSNCTDWIKISEMLLGPVPDGFQFLPKHKANSY 591
+RPP YFGR+DLETLMAS NC DW+KISEMLLGPVP F FLPKHKANSY
Sbjct: 408 DRPPAYFGRNDLETLMASPNCEDWVKISEMLLGPVPTTFAFLPKHKANSY 457
Score = 113 bits (273), Expect = 3e-25
Identities = 70/187 (37%), Positives = 96/187 (51%), Gaps = 12/187 (6%)
Query: 55 EITEDKNDSKTKKRGQNKSRPKIFKDGKESKPCPTILDVESSEQLKICQYNNCKFIHDSK 114
E T+ K K RG N+ RP+ + SK C E + C Y HD +
Sbjct: 35 EHTDGPPRKKKKNRGMNRQRPRDQRPDNSSKLCSFAARGEECTRGDSCFYG-----HDPQ 89
Query: 115 QFLNSKPKDIGDQCHVYKVRGKCPRGIACRYGSDHITADGFNIVNREKFDQWKDDTKNTL 174
+FL +K DIG +C + GKCP GI+CRY H TAD +I+N E F +K+DT N L
Sbjct: 90 KFLETKEPDIGKECVNFLKSGKCPYGISCRYWKHHTTADLKSIINEEFFSHYKEDTSNNL 149
Query: 175 QPSLQTQLQKKKYNFDLAEKLVKHLDTRNKSVDKNLNTSADVGEDIKIGAVTDEDLIKLL 234
+Q L+KKKY F + ++ L S +N+NT V G VT+EDLIKL
Sbjct: 150 AKDVQISLRKKKYMFPRSNAYLELL-----SNAQNVNTQTGVVR--THGCVTNEDLIKLR 202
Query: 235 PRERKTI 241
+E+K +
Sbjct: 203 TQEKKRL 209
>SB_34561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 448
Score = 48.8 bits (111), Expect = 1e-05
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 307 CGNNPYIITKVAQLLQENTELDFIDLNIGCPIDLIYKKGGGSGMMHRLPALETSVRCASK 366
C N+P + + A L++ +E D +DLN+GCP + + G+ + LE V+ A +
Sbjct: 248 CANDPEVFVQAALLVE--SECDGVDLNLGCPQHIAKRGHYGAFLQDEWELLEKMVKLAHE 305
Query: 367 LLSIPFTVKMRTGVYQDKKIT 387
LS+P T K+R V+ D + T
Sbjct: 306 KLSVPITCKIR--VFDDVQKT 324
>SB_8162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 40.7 bits (91), Expect = 0.003
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 223 GAVTDEDLIKLLPR-ERKTID-WNNKLYLSPLTTVGNLPFRRICKEFGADVTCGEMALCE 280
G+V D D + R E +TID + NK +L+P+ +G LP R + +GAD+ E +
Sbjct: 42 GSVLDIDCVTFAMRSEAQTIDMYQNKYFLAPMVRIGTLPARLLALRYGADLVYTEEIIDF 101
Query: 281 SLLK 284
+L+
Sbjct: 102 KMLR 105
>SB_41483| Best HMM Match : Dus (HMM E-Value=1.9)
Length = 169
Score = 37.9 bits (84), Expect = 0.023
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 384 KKITHTI--VPKMSNWGASLITVHGRSREARYTKSSDWEYIETCAQAATPCPVYGNG--- 438
KKI T+ + + G + + VHGR + R + EYI+ A AA PV NG
Sbjct: 13 KKIAETVQLCKLIESTGVTALAVHGREKHERSRQPVHTEYIQAVA-AAVAIPVIANGGSL 71
Query: 439 DIFSYEDYVEMRKIAPTVKGVMIGRGA 465
DI ++ D +E ++ +M+ R A
Sbjct: 72 DIKTFSD-MEQFRLQAGCASIMVARAA 97
>SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07)
Length = 844
Score = 36.3 bits (80), Expect = 0.069
Identities = 19/72 (26%), Positives = 33/72 (45%)
Query: 17 LQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPK 76
+QK EE+S + E++K + SS K+ K + +DK D K ++ P+
Sbjct: 463 IQKERTEEEESSSKEEKKQESSSKEEKKQESSSKEEKKQEKDDKKDDKEGRKASKSPAPR 522
Query: 77 IFKDGKESKPCP 88
++ KP P
Sbjct: 523 SDSRKEKEKPAP 534
>SB_28346| Best HMM Match : BOP1NT (HMM E-Value=8.2e-14)
Length = 258
Score = 34.3 bits (75), Expect = 0.28
Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 13 DEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNK 72
D + + + +EE N+E+ D+++ +NN+E K + K +++ K+
Sbjct: 52 DSHGEEDDDDVEEDEDNIEEDDDDDANKDSKENNIEHDKN----DDQKKNTERGKKPSKV 107
Query: 73 SRPKIFKDGKESKPCPTILDVESSEQ 98
+ P I KD K + + D E+S++
Sbjct: 108 NTPNIIKDNKLREAEKDVDDTETSDE 133
>SB_54268| Best HMM Match : Vicilin_N (HMM E-Value=0.077)
Length = 371
Score = 33.5 bits (73), Expect = 0.49
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 11 IKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQ 70
IK+E +L + ++E++ + E+R L E F LEF + + D + ++ GQ
Sbjct: 280 IKEEQLLHEKELLEQEMQHKEQR-LQEWEREFQQKELEFSSSLERLRVDMDSDYRQQMGQ 338
Query: 71 NKSR 74
+SR
Sbjct: 339 LESR 342
>SB_45935| Best HMM Match : Aldolase_II (HMM E-Value=1.1e-27)
Length = 468
Score = 33.5 bits (73), Expect = 0.49
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 13 DEYVLQKSNI-IEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITE-DKNDSKTKKRGQ 70
D+ ++Q ++ ++E S + EK DE + E K+T + +T D + K+ +
Sbjct: 314 DDVIIQTKHVTVQESSPDFEKGAFDEEDREGVVHKKEVKQTTVVVTRVTDKDGERKEETK 373
Query: 71 NKSRPKIFKDGKE 83
++F DGKE
Sbjct: 374 VTENKQVFIDGKE 386
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 33.5 bits (73), Expect = 0.49
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 7/98 (7%)
Query: 14 EYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKS 73
EY +EKS +KRK ++ + DD E KT+ + ED D + + +
Sbjct: 1518 EYEAMMKAAADEKSKEKKKRKKEDEATRSDDGTDE--KTEDSMQEDAKDLDSSNTASDTT 1575
Query: 74 RPKIFKDGKESKPCPTILDVESSEQLKICQYNNCKFIH 111
+ K GK + T+L+ E L C + F+H
Sbjct: 1576 KEK----GKNKEKDKTVLE-RWEESLMACTSLSQVFVH 1608
>SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 942
Score = 33.5 bits (73), Expect = 0.49
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 2 KNSNAGVCAIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKN 61
K+SN G I ++ +K + + K ++ +K+K + + K + E ++DK
Sbjct: 138 KDSNEGSLTISNDLNSEKKDKKKHKKHSKDKKKKKHKKEKKREKDKHKHKQEKESSDDKP 197
Query: 62 DS-KTKKRGQNKSRPKIFKDGKESK 85
D T K+ K PK DG+E K
Sbjct: 198 DELSTPKKISEKGSPK--GDGRERK 220
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 33.1 bits (72), Expect = 0.65
Identities = 34/144 (23%), Positives = 57/144 (39%), Gaps = 2/144 (1%)
Query: 157 IVNREKFDQWKDDTKNTLQPSLQTQLQKKKYNFDLAEKLVKHLDTRNKSVDKNLNTSADV 216
+V+RE QW + + L+ + QK + E + N + + + AD+
Sbjct: 1831 VVDRENQIQWHKNNEKQLEDEISVLKQKISNLRESNENYADQVAKLNSQIQERESRIADL 1890
Query: 217 GEDIKIGAVTDEDLIK-LLPRERKTIDWNNKLYLSPLTTVGNLPFRRICKEFGADVTCGE 275
+ + +E L K + K D+ NK YL+ L V L K G
Sbjct: 1891 EHFMNLLRDENEKLRKDVAAANAKATDFKNK-YLNALKDVERLQAELTAKNQKIFYLEGR 1949
Query: 276 MALCESLLKGLKQEWALVKRHETE 299
+ E+ LKQE A +K+ +E
Sbjct: 1950 IKALEADKNRLKQEIATMKKTISE 1973
>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
Length = 2155
Score = 32.7 bits (71), Expect = 0.85
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Query: 14 EYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKS 73
E V+Q+ + E S+ EK KLD S E + ++E + S + G+ KS
Sbjct: 202 EKVIQEKEDLAE-SFREEKAKLDSSLMDMTAKYAELE-AQLETISHERTSSLGEMGEIKS 259
Query: 74 RPKIFKDGKESKPCPTILDVESSEQLKICQYNNCKFIHDSKQFLNSKPKDIGDQCH 129
KES ++ E++KI NN K + K+ + ++ + I + H
Sbjct: 260 EFDEATTTKESLSLELDKAKKNFEKIKIRLKNNIKSTREEKEKMKAEIEKISSEKH 315
Score = 31.9 bits (69), Expect = 1.5
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 13 DEYVLQKSNIIEEKSYNLEKRKLD-ESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQN 71
D+ V +K +IEE L++++LD +S D N+E K K++ E +S +
Sbjct: 81 DDNVQEKERMIEELEAKLQEKELDVQSVRDAKDRNIEELKAKLQEREAMLESANEGEELL 140
Query: 72 KSRPKIFKDGKES 84
KS+ + K ES
Sbjct: 141 KSQLEAAKQFYES 153
>SB_28852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3172
Score = 32.3 bits (70), Expect = 1.1
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 191 LAEKLVKHLDTRNKSVDKNLNTSADVGEDIKIGAVTDEDLIKLLPRERK 239
+ +K+ HLD R+K D +LN + D E TDE + +L+ +K
Sbjct: 648 VTQKVCVHLDPRSKHPDPSLNVNKDSEEGKTQAQTTDEIIAQLISDHKK 696
>SB_4521| Best HMM Match : TPR_2 (HMM E-Value=1.7e-13)
Length = 829
Score = 32.3 bits (70), Expect = 1.1
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 294 KRHETEDLFG--AQICGNNPYIITKVAQLLQENTE 326
K +E D+ G A++C NN Y++ AQ+++E TE
Sbjct: 281 KANEENDVLGEIAKLCENNTYLLQGFAQIIREGTE 315
>SB_31796| Best HMM Match : SAP (HMM E-Value=3.5e-10)
Length = 1029
Score = 32.3 bits (70), Expect = 1.1
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 168 DDTKNTLQPSL---QTQLQKKKYNFDLAEKLVKHLDTRNKSVDKNLNTSADVGEDIKIGA 224
DDT + PSL Q QL++KK DL +KL+ + L VG+ +K G
Sbjct: 133 DDTSVGVDPSLIAKQIQLKRKKLEDDLNDKLLARPGPLELVKENILEAGTAVGQAVKEGE 192
Query: 225 VTDEDLIK 232
V D K
Sbjct: 193 VDFTDTTK 200
>SB_22046| Best HMM Match : PPV_E1_N (HMM E-Value=0.61)
Length = 362
Score = 32.3 bits (70), Expect = 1.1
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 20 SNIIEEKSYNLEKRKLDESSASFDDNN-LEFKKTKIEITEDKNDSKTKKRGQNKSRPKIF 78
+N+ EK Y + +L + + DD + +E K ++ I++ + +++ G+N P+I
Sbjct: 240 NNVAVEKKYTINAEELHGTGGTIDDRDAMEGGKGEVYISQIEEENENGNEGENAIPPEIP 299
Query: 79 KDGKESK 85
D +K
Sbjct: 300 PDQDNTK 306
>SB_56890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1665
Score = 31.9 bits (69), Expect = 1.5
Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 5/104 (4%)
Query: 31 EKRKLDESSASFDDNNLEFKKTKIEITED--KNDSKTKKRGQNKSRPKIFKDGKESKPCP 88
EK D+ D+++L++ E +D K DS T GQ K +PK ++ +E K
Sbjct: 1206 EKGDKDKKEDDDDEDSLDWWSRYYETLKDQEKGDSGTHTSGQGKKKPKKEEESEEEKRKK 1265
Query: 89 TI--LDVESSEQLKICQYNNCK-FIHDSKQFLNSKPKDIGDQCH 129
I L++ E + +N ++H F K + D H
Sbjct: 1266 AIPRLNIFKLELECMHDFNGFNDWLHSFPLFRGKKTSEDDDDDH 1309
>SB_16296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1152
Score = 31.9 bits (69), Expect = 1.5
Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 2 KNSNAGVCAIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKN 61
KNS+ E + +K+N +EE + ++ + + + +++ K+TK + TE +
Sbjct: 1013 KNSDQQNGKQTKENIHKKNNPVEESYPGKPRVNNNDYNNTTTEQSVKTKQTKQQETEGRR 1072
Query: 62 DSKTKKRGQNKSRPKIFKDGKESKPCPTILDVESSEQ 98
+SK G+ K+ P + C L + S+Q
Sbjct: 1073 ESKKNSSGKQKNVPTALAESMHCS-CSLPLKTQVSDQ 1108
>SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29)
Length = 462
Score = 31.5 bits (68), Expect = 2.0
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 24 EEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPK 76
E K +R+L++ + N KK + + T + + KT K G+NK+ K
Sbjct: 280 EGKKKKNTRRRLEQKTPEEGKNRKPQKKARTKNTRKRQEQKTPKEGKNKNHQK 332
>SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2480
Score = 31.5 bits (68), Expect = 2.0
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 25 EKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDK---NDSKTKKRGQNKSRPKIFKDG 81
+K K+++DE+ D+ E ++TK ++ E K ++KTK NK + K+
Sbjct: 1304 KKDVQETKKEVDETKTKVDETKKEVQETKKDVQETKKEVQETKTKVDETNKEVQETKKEI 1363
Query: 82 KESK 85
+E+K
Sbjct: 1364 QETK 1367
Score = 30.7 bits (66), Expect = 3.4
Identities = 14/59 (23%), Positives = 29/59 (49%)
Query: 25 EKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPKIFKDGKE 83
+K K+ + E+ D+ + +TK E+ E K D + K+ +++ K+ + KE
Sbjct: 1297 KKEVQETKKDVQETKKEVDETKTKVDETKKEVQETKKDVQETKKEVQETKTKVDETNKE 1355
Score = 30.3 bits (65), Expect = 4.6
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 44 DNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPKIFKDGKESKPCPTILDVESSEQLKICQ 103
D + E +TK E+ E K D + K+ ++++ K+ + KE + T DV+ E K Q
Sbjct: 1288 DLSKEVNETKKEVQETKKDVQETKKEVDETKTKVDETKKEVQ--ETKKDVQ--ETKKEVQ 1343
Query: 104 YNNCKFIHDSKQFLNSKPKDIGDQCHVYKVRGK 136
K +K+ +K + + V++V+GK
Sbjct: 1344 ETKTKVDETNKEVQETKKEIQETKKDVHEVKGK 1376
Score = 29.5 bits (63), Expect = 8.0
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 25 EKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKND 62
+K K+++ E+ D+ N E ++TK EI E K D
Sbjct: 1332 KKDVQETKKEVQETKTKVDETNKEVQETKKEIQETKKD 1369
>SB_12740| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 31.5 bits (68), Expect = 2.0
Identities = 23/109 (21%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
Query: 10 AIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRG 69
++ DEY +++ +E+ + + E+++SF DN++ + KI +++N +
Sbjct: 388 SLADEY--KQALYVEDNTQTIGVEGRVENNSSFIDNSVCIEFLKISQQDNQNLDSSHSMH 445
Query: 70 QNKSRPKIFKDGKESKPCPTILDVESSEQLKICQYNNCKFIHDSKQFLN 118
+ K+ FKD S +D+ + Q +F ++FLN
Sbjct: 446 ETKN----FKDSVTSSHSIASIDITPGNAYMLAQTKPDEFASQDQEFLN 490
>SB_1789| Best HMM Match : RICH (HMM E-Value=1.6)
Length = 254
Score = 31.1 bits (67), Expect = 2.6
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 31 EKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPKIFKDGKE-SKPCPT 89
E+ L+E+S + D KIE+ E K ++ +R N+ R + KE K
Sbjct: 46 ERAALEEASHAATDVTNAMMAVKIELEEKKRTNELLQRALNQQREFTLRQAKEMEKDAKQ 105
Query: 90 ILDVESSEQLKICQYNNCKFIHDSKQFLNSKPKDIGDQC 128
L ++ E Q + FI Q ++ K K +G++C
Sbjct: 106 RLTIQKQEYEAAIQ-RHLSFI---DQLIDDK-KTLGERC 139
>SB_39473| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 31.1 bits (67), Expect = 2.6
Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 161 EKFDQWKDDTKNTLQPSLQTQLQKKKYNFDLAEKLVKHLDT-----RNKSVDKNLNTSAD 215
E +Q KD + + L+ QL+ YN+ +L+ L + R + +N++ S
Sbjct: 23 EGMEQDKDPSADAEIHQLEVQLETNPYNYQSHIQLINLLSSSGDLERLRQARENMSKSFP 82
Query: 216 VGEDIKIGAVTDEDLIKLLPRERKTI 241
+ E++ + + DE + +P R+T+
Sbjct: 83 LTEELWLSWIEDELPLACIPDHRETV 108
>SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1938
Score = 31.1 bits (67), Expect = 2.6
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 473 NEIKEQKIWDISSKD-RFEILKKYSNYGLEHWGSDTQ--GVESTRRFLLEW 520
N IK +K+ +I+++D LKK++NY L S+TQ G S R + W
Sbjct: 764 NIIKSEKVTNINTQDLSLTPLKKFTNYTLTLRSSNTQYTGATSDARIVQTW 814
>SB_58037| Best HMM Match : DUF750 (HMM E-Value=1.8)
Length = 281
Score = 30.7 bits (66), Expect = 3.4
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 13/78 (16%)
Query: 462 GRGALIKPWIF----NEIKEQKI---WDISSKDRFEI----LKKYSNYGLEHWGSDTQGV 510
GR KP++F NEIK +++ + I+ + + + L +S+ LE W S T GV
Sbjct: 56 GRAKPYKPYVFEPSDNEIKRKRMRIRYSIAIDNYYRLTDDNLPSHSSPALEDWKSGTNGV 115
Query: 511 EST-RRFLLEW-LSFLYR 526
ES R+ +W +++L R
Sbjct: 116 ESIFRKVEHDWKMAYLAR 133
>SB_38444| Best HMM Match : TMS_TDE (HMM E-Value=0)
Length = 1031
Score = 30.7 bits (66), Expect = 3.4
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 12 KDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQN 71
K+E+ QK N E + N +K K + + DDN E + T+ +T S ++G++
Sbjct: 894 KNEHT-QKEN---ELNKNNKKEKTNAAEC-VDDNKKENRVTQPSVTNHVTQSNVTRKGES 948
Query: 72 KSRPKIFKDGKESKPCPTILDVES 95
K PK +S P + E+
Sbjct: 949 KKSPKSSVTPPKSFTPPCVTGTEA 972
>SB_25946| Best HMM Match : Pterin_bind (HMM E-Value=2)
Length = 303
Score = 30.7 bits (66), Expect = 3.4
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 9/62 (14%)
Query: 215 DVGEDIKIGAVTDE-------DLIKLLPRERKTIDWNNKLYLSPLTTVGNLPFRRICKEF 267
D+G D+ +G T E +++KLL RE + +++ ++P T GNL R+C E+
Sbjct: 102 DLGADVDVGWATAEAAYNGHVEVLKLL-RENFS-EFDPDYAITPATESGNLEIVRLCLEW 159
Query: 268 GA 269
GA
Sbjct: 160 GA 161
>SB_23567| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00019)
Length = 653
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 78 FKDGKESKPCPTILDVESSEQLKICQYNNCKFIHDSKQFLNSKPKDIGDQCH 129
+K K SK PT+++V +S Q I N+ ++Q + KP D G H
Sbjct: 486 YKPLKRSKITPTVINVATSSQTNITDVNSISKKQYTEQVNDLKPDDSGLCAH 537
>SB_21874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 30.7 bits (66), Expect = 3.4
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 10 AIKDEYVLQKSNIIEEKSYNL-EKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKR 68
A+K+E + +N ++ K+ N +K K ++ + + + K K + +DK K
Sbjct: 377 AMKEELHSKGTNTVKNKTKNKKDKTKNNKDKTKENKDKTKENKDKTKNNKDKTKENKDKT 436
Query: 69 GQNKSRPKIFKD-GKESK 85
+NK + K KD KE+K
Sbjct: 437 KENKDKTKENKDKTKENK 454
>SB_4416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 503
Score = 30.7 bits (66), Expect = 3.4
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 31 EKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQ----NKSRPKIFKDGKESKP 86
EKRK+ E+ + +D ++ ++ ED SK KK + +++PK KD E P
Sbjct: 359 EKRKVPENVKTQEDFKIQEPNYAVQPVEDNQSSKPKKEPRLIRPKRNKPK-GKDLSEGPP 417
Query: 87 CPT 89
PT
Sbjct: 418 RPT 420
>SB_52452| Best HMM Match : Borrelia_orfA (HMM E-Value=1.3)
Length = 471
Score = 30.7 bits (66), Expect = 3.4
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 3 NSNAGVCAIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLE-FKKTKIEITEDKN 61
N N + + D L+KS E K +E D+ + +NNL+ +K + E + ++
Sbjct: 113 NENGSIQDV-DRKQLKKSKKGENKRCGIEVSNDDDLESKKKENNLKKSRKRRCEDQDSES 171
Query: 62 DSKTKK-RGQNKSRPKIFKDGK-ESKPC 87
D K K R Q K K K GK E K C
Sbjct: 172 DDKDKDIRKQEKKLKK--KGGKREDKDC 197
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 26 KSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPKIFKDG--KE 83
K N +++K E + DN KK E +ED+ +K++ + + + K +G K+
Sbjct: 259 KPKNKKRKKKKEKKTNETDNESSIKKKSCEDSEDEEHLPSKEKKKKRKKSKDSSEGYIKQ 318
Query: 84 SK 85
SK
Sbjct: 319 SK 320
>SB_41880| Best HMM Match : TolA (HMM E-Value=2.2)
Length = 374
Score = 30.7 bits (66), Expect = 3.4
Identities = 18/84 (21%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 12 KDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKN-----DSKTK 66
++ +L++ ++ + + ++++E D+ ++ K+ ++EI EDK + T+
Sbjct: 203 EENRILEEEERVKREEEEKKAKEVEEKRMGEDEEQIKLKEEEVEIKEDKTAELELEETTE 262
Query: 67 K----RGQNKSRPKIFKDGKESKP 86
K + +N S KI K +E P
Sbjct: 263 KSNHAKRENLSPSKIHKKDREKTP 286
>SB_38348| Best HMM Match : Ank (HMM E-Value=8.7)
Length = 188
Score = 30.7 bits (66), Expect = 3.4
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 9/62 (14%)
Query: 215 DVGEDIKIGAVTDE-------DLIKLLPRERKTIDWNNKLYLSPLTTVGNLPFRRICKEF 267
D+G D+ +G T E +++KLL RE + +++ ++P T GNL R+C E+
Sbjct: 102 DLGADVDVGWATAEAAYNGHVEVLKLL-RENFS-EFDPDYAITPATESGNLEIVRLCLEW 159
Query: 268 GA 269
GA
Sbjct: 160 GA 161
>SB_55587| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.13)
Length = 359
Score = 30.3 bits (65), Expect = 4.6
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 57 TEDKNDSKTKKRGQNKSRPKIFKDGKESKPCPTILDVESSEQLK 100
+E + + KK+GQNK + +GKESK L+ + +++K
Sbjct: 187 SEWEKERVAKKKGQNKIDDPVETNGKESKDIERFLEWDQEQKVK 230
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 30.3 bits (65), Expect = 4.6
Identities = 28/119 (23%), Positives = 48/119 (40%), Gaps = 4/119 (3%)
Query: 19 KSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPKIF 78
K+ + + N K+ + SS S ++ E K K E K + K+KK + +S +
Sbjct: 102 KAPVAKTSGKNSAKKAAESSSESESESEEEAPKKK-EAPVAKQNGKSKKAKKEESSSESD 160
Query: 79 KDGKESKPCPTILDVESSEQLKICQYNNCKFIHDSKQFLN-SKPKDIGDQCHVYKVRGK 136
D E P P V + E++ + N F D + + K + C V G+
Sbjct: 161 SDSDEETPTPK-KTVPAKEEMSVF-LGNLSFDADEETLAAFFEEKGLSATCRVITQEGR 217
>SB_57515| Best HMM Match : CBFNT (HMM E-Value=3.3)
Length = 213
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 24 EEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPKIFKDGKE 83
++K + +K + S + DD + +KT+I + E+K + K+ + P DGKE
Sbjct: 138 KDKESDKDKAGSETSLNAADDEETK-EKTEIAVEEEKEGEEFKREEAAEETPAEVADGKE 196
Query: 84 SK 85
K
Sbjct: 197 KK 198
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/65 (26%), Positives = 30/65 (46%)
Query: 1 MKNSNAGVCAIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDK 60
+KN AGV KDE + K I + EK+ + DDN E + ++ +++
Sbjct: 2772 IKNLEAGVRTAKDETRMDKKRIATLEVEYAEKQGMARDLEKMDDNLTELRLKYDDLVKER 2831
Query: 61 NDSKT 65
+ K+
Sbjct: 2832 EEVKS 2836
>SB_15549| Best HMM Match : ADH_zinc_N (HMM E-Value=9.4e-13)
Length = 562
Score = 30.3 bits (65), Expect = 4.6
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 12 KDEYVLQKSNIIEEKSYNLEKR-----KLDESSASFDDNNLEFKKTKIEITEDKNDSKTK 66
K L+K + +EK + +R K DE +D+ E K + E ED+ +
Sbjct: 464 KKSRTLRKLTVAKEKGASERRRRGRSPKSDEQKKKDEDSKPEEAKPE-EPKEDEKSKPEE 522
Query: 67 KRGQNKSRPKIFKDGKESKPCPTILDVES 95
+ + +++P+ K +E+KP T ++ E+
Sbjct: 523 TKAEEEAKPEAPKAEEEAKPGETKVEEEA 551
>SB_56950| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 237
Score = 29.9 bits (64), Expect = 6.0
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 190 DLAEKLVKHLDTRNKSVDKNLNTSADVGEDIKIGAVTDEDLIKLLPRERK 239
DL K+ KH DT S K + S V + ++ G ++DE+ +L + K
Sbjct: 112 DLTSKVAKHEDTMVLSESKKNSISELVSKALQNGHISDEEFQLILREQEK 161
>SB_2521| Best HMM Match : Ank (HMM E-Value=8.7)
Length = 243
Score = 29.9 bits (64), Expect = 6.0
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 9/62 (14%)
Query: 215 DVGEDIKIGAVTDE-------DLIKLLPRERKTIDWNNKLYLSPLTTVGNLPFRRICKEF 267
D+G D+ +G T E +++KLL RE + +++ ++P T GNL R+C E+
Sbjct: 102 DLGVDVDVGWATAEAAYNGHVEVLKLL-RENFS-EFDPDYAITPATESGNLEIVRMCLEW 159
Query: 268 GA 269
GA
Sbjct: 160 GA 161
>SB_58746| Best HMM Match : RA (HMM E-Value=0.85)
Length = 820
Score = 29.9 bits (64), Expect = 6.0
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 190 DLAEKLVKHLDTRNKSVDKNLNTSADVGEDIKIGAVTDEDLIKLLPRERK 239
DL K+ KH DT + K + S V + ++ G ++DE+ +L+ RER+
Sbjct: 732 DLTSKVAKHEDTMVLAESKTNSISELVSKALQNGHISDEE-FQLILRERE 780
>SB_56456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1266
Score = 29.9 bits (64), Expect = 6.0
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 13 DEYVLQKS----NIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKR 68
DE ++ K NI E + +L ++++ +D+ N T + + K+D KT ++
Sbjct: 824 DEMIMDKPPPQINITETQDNSLGDLQIEDVEERYDEENTTIGPTATTVEQPKDDKKT-RQ 882
Query: 69 GQNKSRPK 76
G+ PK
Sbjct: 883 GRKTPAPK 890
>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
Length = 521
Score = 29.9 bits (64), Expect = 6.0
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 20 SNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPKIFK 79
+N E+ + ++KLD+ S ++N + K + EDK + KT+ R ++K K+
Sbjct: 243 TNKPEDNADEKPEKKLDDKSEDKPEDNADEKPE--DNPEDKPEDKTEDRPEDKPEDKLED 300
Query: 80 DGKESK 85
KE++
Sbjct: 301 KPKENQ 306
>SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 932
Score = 29.5 bits (63), Expect = 8.0
Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 19 KSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPKIF 78
K + I E ++ K +++ D + +K K+E DK T + + ++ K
Sbjct: 436 KEHTITELGQEIKSMKQEKNRMLVDLDREMMEKKKLE---DKLMVATNEIQRKEAAVKSV 492
Query: 79 KDGKESKPCPTILDVESSEQLKICQYNNCKFIHDSKQ 115
++ +S+ IL+ E S + +C N + +HD K+
Sbjct: 493 EEKAKSQ----ILETEKSRKQVLCDLQNLRTVHDKKE 525
>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2848
Score = 29.5 bits (63), Expect = 8.0
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 44 DNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPKIFKDGKESKPCPTILDVESSEQLK 100
D++ E +T+ E ++K KK+G NK + +GKESK L+ + +++K
Sbjct: 1363 DSDSEATETESEWEKEK---VAKKKGHNKIDDPVETNGKESKDIERFLEWDQEQKVK 1416
>SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1789
Score = 29.5 bits (63), Expect = 8.0
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 12 KDEYVLQKSNIIEEK-SYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQ 70
KD+ +K EEK + E++K+++S S D ++T +E E K D + G+
Sbjct: 1599 KDDTASEKKESSEEKMEVDGEEQKVEKSPESVDKTE-GHERTDVEDDEKKADDSNEDIGK 1657
Query: 71 NKSRPKIFKDGK--ESKPCPTILDVESSEQ 98
+D K ESK D ES ++
Sbjct: 1658 KDESRDQAEDAKKEESKTEEMETDAESKQE 1687
>SB_35674| Best HMM Match : SH2 (HMM E-Value=0)
Length = 871
Score = 29.5 bits (63), Expect = 8.0
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 12 KDEYVLQKSNIIEEK-SYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQ 70
KD+ +K EEK + E++K+++S S D ++T +E E K D + G+
Sbjct: 178 KDDTASEKKESSEEKMEVDGEEQKVEKSPESVDKTE-GHERTDVEDDEKKADDSNEDIGK 236
Query: 71 NKSRPKIFKDGK--ESKPCPTILDVESSEQ 98
+D K ESK D ES ++
Sbjct: 237 KDESRDQAEDAKKEESKTEEMETDAESKQE 266
>SB_33949| Best HMM Match : TFIIB (HMM E-Value=0.0018)
Length = 720
Score = 29.5 bits (63), Expect = 8.0
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 9/62 (14%)
Query: 215 DVGEDIKIGAVTDE-------DLIKLLPRERKTIDWNNKLYLSPLTTVGNLPFRRICKEF 267
D+G D+ +G T E +++KLL RE + +++ ++P T GNL R+C E+
Sbjct: 580 DLGADVDVGWATAEAAYNGHVEVLKLL-RENFS-EFDPDCAITPATESGNLEIVRLCLEW 637
Query: 268 GA 269
G+
Sbjct: 638 GS 639
>SB_27034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 629
Score = 29.5 bits (63), Expect = 8.0
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 18 QKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSR 74
Q+ N E SY++EK D+ + DD+N ++ + + E + N+SK K K R
Sbjct: 168 QQRNRPAEVSYDIEKSDYDDDNG--DDDNYDYDEEE-ESNINNNESKKKASSNLKER 221
>SB_12099| Best HMM Match : DUF1220 (HMM E-Value=4.3)
Length = 713
Score = 29.5 bits (63), Expect = 8.0
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 43 DDNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPKIFKDGKESKPCPTILDVESSEQLKIC 102
++ + + KK ++E E D + KK G N+S P++ + E + P + + ES E L+
Sbjct: 483 EEGDKDEKKPEVEGPEAAQDGE-KKEG-NESAPEVEEVKPEPEKEPVLKERESRESLR-- 538
Query: 103 QYNNCKFIHDSKQFLNSKPKDIGDQ 127
+ + K K + S D GD+
Sbjct: 539 ERSGTKDCKSPKDRVKSAKSDRGDK 563
>SB_6206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 29.5 bits (63), Expect = 8.0
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 24 EEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKT--KKRGQ 70
+ K+ +K+K +ES D+ + K +E ED N+ T KK+G+
Sbjct: 67 KSKTIKKKKKKTEESDDDAKDSGNDLKDDNVEDIEDDNEKDTPEKKKGK 115
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.135 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,400,579
Number of Sequences: 59808
Number of extensions: 957717
Number of successful extensions: 3078
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 3010
Number of HSP's gapped (non-prelim): 105
length of query: 591
length of database: 16,821,457
effective HSP length: 86
effective length of query: 505
effective length of database: 11,677,969
effective search space: 5897374345
effective search space used: 5897374345
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)
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