GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001335-TA|BGIBMGA001335-PA|IPR001269|Dihydrouridine
synthase, DuS
         (591 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       29   0.26 
AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transpor...    28   0.61 
AF533894-1|AAM97679.1|  156|Anopheles gambiae ascorbate transpor...    27   1.1  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    26   3.2  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    26   3.2  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        26   3.2  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    26   3.2  
DQ974167-1|ABJ52807.1|  434|Anopheles gambiae serpin 8 protein.        25   4.3  
U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         24   9.9  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   9.9  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     24   9.9  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     24   9.9  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     24   9.9  

>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 29.5 bits (63), Expect = 0.26
 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 6/75 (8%)

Query: 12  KDEYVLQKSNIIEEKSYNLEKRKLDESSASFDD--NNLEFKKTKIEITEDKN----DSKT 65
           K+  VLQ    + E++Y +E R ++ +  +FD+   +L+    + EI E+ N    D+  
Sbjct: 57  KNNSVLQAYKDVLEQNYAVEVRDIERNDYNFDEPKTSLDPVVVEEEIIEESNGPDGDNLV 116

Query: 66  KKRGQNKSRPKIFKD 80
            ++G N S  K   D
Sbjct: 117 LEQGSNNSNSKDIVD 131


>AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transporter
           protein.
          Length = 570

 Score = 28.3 bits (60), Expect = 0.61
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 5/64 (7%)

Query: 199 LDTRNKSVDKNLNTSADVGEDIKIGAVTD---EDLIKLLPRERKTIDWNNKLYLSPLTTV 255
           + T N++VD  L  S  +G  I +G V     ++LI   P ER  + W+ ++ L  +   
Sbjct: 470 IQTGNQTVDSTL--SVLLGMTILVGGVLGCVLDNLIPGTPEERGLVAWSKEMALETVQAN 527

Query: 256 GNLP 259
            +LP
Sbjct: 528 DDLP 531


>AF533894-1|AAM97679.1|  156|Anopheles gambiae ascorbate transporter
           protein.
          Length = 156

 Score = 27.5 bits (58), Expect = 1.1
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 5/64 (7%)

Query: 199 LDTRNKSVDKNLNTSADVGEDIKIGAVTD---EDLIKLLPRERKTIDWNNKLYLSPLTTV 255
           + T N++VD  L  S  +G  I +G V     ++LI   P ER  + W+ ++ L      
Sbjct: 56  IQTGNQTVDSTL--SVLLGTTILVGGVLGCVLDNLIPGTPEERGLVAWSKEMALETAQDN 113

Query: 256 GNLP 259
            +LP
Sbjct: 114 DDLP 117


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 25.8 bits (54), Expect = 3.2
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 90  ILDVESSEQLKICQYNNCKFIHDSKQFLNSKPKDIGDQCHVYK 132
           I D ES+   +I  YN  KF+ +S   L+ + +D+G Q  V++
Sbjct: 44  IFDGESAGT-RIVGYNRMKFLLESLADLDRQFRDLGGQLLVFR 85


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.8 bits (54), Expect = 3.2
 Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 5/68 (7%)

Query: 158 VNRE-KFDQWKDDTKNTLQPSLQTQLQK----KKYNFDLAEKLVKHLDTRNKSVDKNLNT 212
           VNRE K DQ + D++   +  ++   +K    K       EKL+ H+ T    +++    
Sbjct: 406 VNREQKSDQDRLDSEINKKAQIEENYKKIESEKNEALKRQEKLIDHIKTSRLGLEEQKRI 465

Query: 213 SADVGEDI 220
            A++ +D+
Sbjct: 466 KAELSQDV 473


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 25.8 bits (54), Expect = 3.2
 Identities = 10/28 (35%), Positives = 19/28 (67%)

Query: 159 NREKFDQWKDDTKNTLQPSLQTQLQKKK 186
           +R++FD +K + K T+  + Q Q Q+K+
Sbjct: 241 DRQRFDNYKRELKETMIRNQQLQRQRKQ 268


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 25.8 bits (54), Expect = 3.2
 Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 4/93 (4%)

Query: 11   IKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQ 70
            +K +Y     N+I E+    ++           D++     +  + ++D N S +++R  
Sbjct: 1891 VKPQYYF--GNVISEQEAGRQRYNYYYKDFDLSDSSSSESSSSSDESDDSNSSSSEERKP 1948

Query: 71   NKSRPKIFKDGKESKPCPTILDVESSEQ-LKIC 102
            N+      K     K CP     +  EQ  KIC
Sbjct: 1949 NREH-FFEKQQYTEKECPVKYQAQYVEQGDKIC 1980


>DQ974167-1|ABJ52807.1|  434|Anopheles gambiae serpin 8 protein.
          Length = 434

 Score = 25.4 bits (53), Expect = 4.3
 Identities = 11/28 (39%), Positives = 14/28 (50%)

Query: 34  KLDESSASFDDNNLEFKKTKIEITEDKN 61
           +LD S   FDD+ +E    K E   D N
Sbjct: 310 ELDRSLVDFDDDEVEVHLPKFEFNSDYN 337


>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 24.2 bits (50), Expect = 9.9
 Identities = 13/29 (44%), Positives = 15/29 (51%)

Query: 322 QENTELDFIDLNIGCPIDLIYKKGGGSGM 350
           QE   LD  + + G P  LI  KG  SGM
Sbjct: 585 QEKFALDMSEAHCGFPDRLILPKGWTSGM 613


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 24.2 bits (50), Expect = 9.9
 Identities = 14/53 (26%), Positives = 25/53 (47%)

Query: 25  EKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPKI 77
           E+     K+K +ES  ++  +  +F+  K+EI E +    T K    K   +I
Sbjct: 793 EEDLKRSKKKSEESRKNWKKHEQDFETLKLEIEELQKGIVTAKEQAVKLEEQI 845


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 24.2 bits (50), Expect = 9.9
 Identities = 13/29 (44%), Positives = 15/29 (51%)

Query: 322 QENTELDFIDLNIGCPIDLIYKKGGGSGM 350
           QE   LD  + + G P  LI  KG  SGM
Sbjct: 585 QEKFALDMSEAHCGFPDRLILPKGWTSGM 613


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 24.2 bits (50), Expect = 9.9
 Identities = 13/29 (44%), Positives = 15/29 (51%)

Query: 322 QENTELDFIDLNIGCPIDLIYKKGGGSGM 350
           QE   LD  + + G P  LI  KG  SGM
Sbjct: 585 QEKFALDMSEAHCGFPDRLILPKGWTSGM 613


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 24.2 bits (50), Expect = 9.9
 Identities = 13/29 (44%), Positives = 15/29 (51%)

Query: 322 QENTELDFIDLNIGCPIDLIYKKGGGSGM 350
           QE   LD  + + G P  LI  KG  SGM
Sbjct: 585 QEKFALDMSEAHCGFPDRLILPKGWTSGM 613


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.135    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 643,093
Number of Sequences: 2123
Number of extensions: 27968
Number of successful extensions: 47
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 38
Number of HSP's gapped (non-prelim): 13
length of query: 591
length of database: 516,269
effective HSP length: 68
effective length of query: 523
effective length of database: 371,905
effective search space: 194506315
effective search space used: 194506315
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 50 (24.2 bits)