Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001334-TA|BGIBMGA001334-PA|IPR001478|PDZ/DHR/GLGF,
IPR008145|Guanylate kinase/L-type calcium channel region,
IPR008144|Guanylate kinase
(567 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0529 - 20067974-20068588,20069982-20070048,20070156-200702... 99 5e-21
03_02_0825 + 11565701-11565862,11565963-11566154,11567674-115677... 48 2e-05
08_02_0648 - 19694538-19696569,19697151-19697998 34 0.26
12_02_0726 - 22552005-22552035,22552507-22552598,22552970-225530... 33 0.46
03_02_0838 + 11641484-11642030,11643614-11643650,11643784-116438... 31 1.9
10_08_0168 - 15379897-15380819,15381306-15381894 31 3.2
04_03_0111 - 11361954-11363510 31 3.2
11_02_0006 + 7274148-7274986,7275636-7277586 30 4.3
03_01_0603 + 4445977-4446882 30 4.3
08_02_1448 - 27168389-27172021 30 5.7
02_01_0641 + 4800371-4800703,4801703-4801863,4802013-4802379 30 5.7
07_03_1589 + 27948546-27948548,27948890-27948958,27949235-279493... 29 7.5
01_06_0071 + 26177698-26177796,26178449-26178553,26178636-261787... 29 7.5
12_02_0280 - 16729000-16729678,16729948-16730039,16730072-167307... 29 9.9
08_02_0650 - 19708479-19710507,19711033-19711889 29 9.9
03_05_0655 + 26491238-26491696 29 9.9
>12_02_0529 -
20067974-20068588,20069982-20070048,20070156-20070264,
20070357-20070402,20070501-20070636,20070745-20070866,
20070944-20071306,20071914-20072043,20072129-20072202,
20072620-20072709,20072836-20072875,20073047-20073117,
20074248-20074277
Length = 630
Score = 99 bits (238), Expect = 5e-21
Identities = 53/159 (33%), Positives = 86/159 (54%), Gaps = 3/159 (1%)
Query: 345 RRVLALVGTRGVGRRTLKNRLIQDYPDRFGAVVPHTSRPPRPMEENGQSYWFVSREEMER 404
++ + + G GVG+ TL +L+++YP +FG V HT+R PR E +G Y F R ++E
Sbjct: 174 QKPIVISGPSGVGKGTLIAKLMKEYPSKFGFSVSHTTRAPREKEIDGVHYHFTERSKIEE 233
Query: 405 DAHAGRFLEYGEHNGNLYGTHLDSIRAVIKEGKMCILDCAPQSLKLLHNSSEFLPYVVMI 464
+ G+FLE+ +GN+YGT ++++ +V EGK CILD Q + + SS + +
Sbjct: 234 EISEGKFLEFAHVHGNVYGTSVEAVESVTDEGKRCILDIDVQGARSVRASS-LEAIFIFV 292
Query: 465 TAPGIEQLKNLTHASNRNLTFDRQSSIRYSSRRARTLES 503
P E+L+ A R + Q R + RA +S
Sbjct: 293 CPPSFEELEKRLRA--RGTETEEQIQKRLRNARAELDQS 329
>03_02_0825 +
11565701-11565862,11565963-11566154,11567674-11567718,
11568224-11568535,11569036-11569092
Length = 255
Score = 48.0 bits (109), Expect = 2e-05
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 326 LEGAELALYEEVARTPPFLRRVLALVGTRGVGRRTLKNRLIQDYPDRFGAVVPHTSRPPR 385
LE A + PP +L + G GVG+ + RL Q+ + VV TSR R
Sbjct: 17 LEAALGTTFSSEPLAPPPQPMILVISGPSGVGKDAVIQRL-QEEREGMHFVVTATSRAKR 75
Query: 386 PMEENGQSYWFVSREE----MERDAHAGRFLEYGEHNG 419
P E +G+ Y+FV++EE +ER L YGE+ G
Sbjct: 76 PGEVDGKDYYFVTKEEFLTMIERKELLEYALVYGEYKG 113
>08_02_0648 - 19694538-19696569,19697151-19697998
Length = 959
Score = 34.3 bits (75), Expect = 0.26
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 345 RRVLALVGTRGVGRRTLKNRLIQDYPDRFG-AVVPHTSRPP 384
RRV+++VG+ G+G+ TL N++ Q RF V SR P
Sbjct: 186 RRVISIVGSGGIGKTTLANQVYQKVRSRFSWTVFVSVSRSP 226
>12_02_0726 -
22552005-22552035,22552507-22552598,22552970-22553094,
22553221-22553311,22553475-22553755,22554211-22554394,
22554499-22554583,22554692-22554782,22554909-22555293,
22555457-22555669,22555873-22556418,22556572-22556788,
22556907-22557058,22557519-22557663,22557846-22557907,
22559130-22559291,22559393-22559482,22560055-22560215,
22560907-22560997,22561125-22561308,22561556-22561737,
22561857-22562086,22562622-22562685
Length = 1287
Score = 33.5 bits (73), Expect = 0.46
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 189 VARILAGSAAAKQALVSVGDVLLEVDGVHIESEEQLKEAVAKPNDRVTLKVGPNLKEKSS 248
+AR ++G A ++ +L D + + +H+ +E LK+ V+ PN +L +++
Sbjct: 527 MARTMSGPATSETSLPV--DRPMRLSEIHVAAEHALKQTVSDPNFMTSLSSLEEFEKRYM 584
Query: 249 QLTNKLTISDRKDPNWWQ 266
+LT +D +WW+
Sbjct: 585 ELTK--GAADNYHHSWWK 600
>03_02_0838 +
11641484-11642030,11643614-11643650,11643784-11643841,
11646176-11646265,11646796-11646913,11648093-11648277,
11648330-11648455,11648578-11648634,11648741-11648821,
11649068-11649102,11649265-11649354,11649443-11649599,
11649785-11649901
Length = 565
Score = 31.5 bits (68), Expect = 1.9
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Query: 128 GSGIDDKLIPNEFPDLIEFSKESPEGNGDM-PIETVKVVGLRKVPGQPLGLTVTTDEHGQ 186
GS + DK+I E P + F E D+ P +V + KV GL+ + H +
Sbjct: 192 GSQVFDKIIKKEIPSTVVFDDEKVLAFRDINPQAPTHIVIIPKVKDGLTGLSKAEERHVE 251
Query: 187 LIVARILAGSAAAKQALVSVGDVLLEVDG 215
++ + AKQ + G ++ DG
Sbjct: 252 ILGYLLYVAKVVAKQEGLEDGYRIVINDG 280
>10_08_0168 - 15379897-15380819,15381306-15381894
Length = 503
Score = 30.7 bits (66), Expect = 3.2
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 186 QLIVARILAGSAAAKQALVSVGDVLLEVDGV-HIESEEQLKEAVAKPNDRVTLKVGP 241
+L+V AG A + V G+V ++GV H E E L+E V K + V P
Sbjct: 421 RLVVREWRAGVAVGDRGAVDAGEVRARIEGVMHGEEGEVLREQVGKMRATLHAAVAP 477
>04_03_0111 - 11361954-11363510
Length = 518
Score = 30.7 bits (66), Expect = 3.2
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 227 AVAKPNDRVTLKVGPNLKEKSSQLTNKLTISDRKD 261
A A P+D L P+++ + SQLTN L +D KD
Sbjct: 180 ATASPDDGFPLPRFPDVRVQRSQLTNHLAAADGKD 214
>11_02_0006 + 7274148-7274986,7275636-7277586
Length = 929
Score = 30.3 bits (65), Expect = 4.3
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 319 ESRSSVQLEGAELALYEE-VARTPPFLRRVLALVGTRGVGRRTLKNRLIQDYPDRF 373
E + V +EG + E+ + P + RRV+++VG+ G G+ TL ++ + +F
Sbjct: 170 EVQKLVGIEGPSKEIIEQLIGEEPTWHRRVVSVVGSGGSGKTTLAKQVYERIRGQF 225
>03_01_0603 + 4445977-4446882
Length = 301
Score = 30.3 bits (65), Expect = 4.3
Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Query: 370 PDRFGAVVPH---TSRPPRPME----ENGQSYWFVSREEMERDAHAGRFLEYGEHNGNLY 422
PD+F +P T RP P +G W R E + DA L H+ L
Sbjct: 17 PDKFYCALPDCTTTDRPVAPAPAASGSSGDYVWDALRAEAQDDADDEPLLRKFYHDLVLS 76
Query: 423 GTHLDSIRAVIKEGKMCILDCAPQ 446
L+S A + K+CI PQ
Sbjct: 77 RPSLESALASLLAAKLCIPGALPQ 100
>08_02_1448 - 27168389-27172021
Length = 1210
Score = 29.9 bits (64), Expect = 5.7
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 445 PQSLKLLHNSSEFLPYVVMITAP-GIEQLKNLTHASNRNLTFDRQSSIRYSSRRARTLES 503
P + LL+N +V+ A GI++LKNL H +NR + ++R + R +E
Sbjct: 679 PPNFGLLNNLRTLTTFVLDTKAGCGIDELKNLRHIANRLELY----NLRKINCRNNGIE- 733
Query: 504 LASLYEEEDLKQTL 517
A+L+++E+L + L
Sbjct: 734 -ANLHQKENLSELL 746
>02_01_0641 + 4800371-4800703,4801703-4801863,4802013-4802379
Length = 286
Score = 29.9 bits (64), Expect = 5.7
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 232 NDRVTLKVGPNLKEK--SSQLTNKLTISDRKDPNWWQASHVERPE 274
N RV KV L++K + +SD KDPN+W + V R E
Sbjct: 135 NPRVMRKVQAELRDKLAGKPRVTEDDLSDLKDPNYWDDAEVFRLE 179
>07_03_1589 +
27948546-27948548,27948890-27948958,27949235-27949335,
27949460-27950173,27951172-27951333,27951669-27952458
Length = 612
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 372 RFGAVVPHTSRPPRPMEENGQSYWFVSREEMERDAHA 408
R A+ PH +R P M Q Y VS++++E+ A A
Sbjct: 234 RVNAISPHGTRTPMAMHVLSQMYPGVSKDDLEKMADA 270
>01_06_0071 +
26177698-26177796,26178449-26178553,26178636-26178742,
26179466-26179620,26180140-26180228,26180353-26180875,
26181568-26181642,26181802-26182022,26182657-26182739,
26182826-26182937,26183206-26183280,26183346-26183525
Length = 607
Score = 29.5 bits (63), Expect = 7.5
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 203 LVSVGDVLLEVDGVHIESEEQLKEAVAKPNDRVTLKVGPNLKEKSSQL--TNKLTISDRK 260
LV+ D L + D V + +EA A D ++ G K SS L TN T
Sbjct: 334 LVAEYDELAKQDMVSPQERNLEQEAKANSKDAEPVQ-GKAKKRTSSVLDSTNDTTKEVNP 392
Query: 261 DPNWWQASHVERPEIVGLIPSPEL-EERRKAYVPPEADFVH 300
+ N + + E+ + L+ E+ EE+ + PP AD VH
Sbjct: 393 EYNLDEPTMEEKLASLNLLNKSEITEEQPPSLAPPSADSVH 433
>12_02_0280 -
16729000-16729678,16729948-16730039,16730072-16730772,
16731033-16731144,16731961-16731970,16732954-16733663
Length = 767
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 333 LYEEVARTPPFLRRVLALVGTRGVGRRTLKNRLIQDYPDRF 373
L EE P +V+++VG G+G+ TL N++ + D+F
Sbjct: 134 LTEEGQSGPTQQLKVVSIVGFGGLGKTTLANQVYKQVKDKF 174
>08_02_0650 - 19708479-19710507,19711033-19711889
Length = 961
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 345 RRVLALVGTRGVGRRTLKNRLIQDYPDRF 373
RRV+++VG G+G+ TL N++ Q +F
Sbjct: 190 RRVVSIVGFGGLGKTTLANQVYQHIKSQF 218
>03_05_0655 + 26491238-26491696
Length = 152
Score = 29.1 bits (62), Expect = 9.9
Identities = 22/77 (28%), Positives = 32/77 (41%)
Query: 127 RGSGIDDKLIPNEFPDLIEFSKESPEGNGDMPIETVKVVGLRKVPGQPLGLTVTTDEHGQ 186
RG G + P E P L F + GN P K++GL G LGL ++ G
Sbjct: 73 RGGGAAAAVRPEEDPFLAAFLACTERGNRGTPKGGSKLLGLGLGLGSGLGLGLSCKGPGG 132
Query: 187 LIVARILAGSAAAKQAL 203
++ + + QAL
Sbjct: 133 VVQSVVRLAKTMPPQAL 149
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.134 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,277,237
Number of Sequences: 37544
Number of extensions: 691345
Number of successful extensions: 1984
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1975
Number of HSP's gapped (non-prelim): 16
length of query: 567
length of database: 14,793,348
effective HSP length: 86
effective length of query: 481
effective length of database: 11,564,564
effective search space: 5562555284
effective search space used: 5562555284
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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