Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001334-TA|BGIBMGA001334-PA|IPR001478|PDZ/DHR/GLGF,
IPR008145|Guanylate kinase/L-type calcium channel region,
IPR008144|Guanylate kinase
(567 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g57550.1 68416.m06408 guanylate kinase 2 (GK-2) identical to ... 103 2e-22
At2g41880.1 68415.m05179 guanylate kinase 1 (GK-1) identical to ... 103 2e-22
At3g06200.1 68416.m00713 guanylate kinase, putative similar to g... 52 8e-07
At5g26570.1 68418.m03152 glycoside hydrolase starch-binding doma... 35 0.17
At5g58940.1 68418.m07383 protein kinase family protein contains ... 32 0.89
At3g53270.4 68416.m05874 expressed protein endopeptidase Clp ATP... 31 1.5
At3g53270.3 68416.m05873 expressed protein endopeptidase Clp ATP... 31 1.5
At3g53270.2 68416.m05872 expressed protein endopeptidase Clp ATP... 31 1.5
At3g53270.1 68416.m05871 expressed protein endopeptidase Clp ATP... 31 1.5
At5g44080.1 68418.m05393 bZIP transcription factor family protei... 31 2.7
At1g76290.1 68414.m08860 AMP-dependent synthetase and ligase fam... 31 2.7
At5g19340.1 68418.m02305 expressed protein 30 3.6
At3g50950.2 68416.m05579 disease resistance protein (CC-NBS-LRR ... 30 3.6
At3g50950.1 68416.m05578 disease resistance protein (CC-NBS-LRR ... 30 3.6
At5g67570.1 68418.m08520 pentatricopeptide (PPR) repeat-containi... 30 4.7
At5g24050.1 68418.m02825 hypothetical protein contains Pfam prof... 30 4.7
At3g01510.1 68416.m00077 5'-AMP-activated protein kinase beta-1 ... 30 4.7
At5g23080.1 68418.m02698 SWAP (Suppressor-of-White-APricot)/surp... 29 6.2
At2g22010.1 68415.m02614 zinc finger (C3HC4-type RING finger) fa... 29 6.2
At1g49820.1 68414.m05586 5-methylthioribose kinase family contai... 29 6.2
At1g10390.1 68414.m01171 nucleoporin family protein contains Pfa... 29 6.2
At1g07380.1 68414.m00787 ceramidase family protein contains simi... 29 6.2
At2g47670.1 68415.m05953 invertase/pectin methylesterase inhibit... 29 8.3
At2g26650.1 68415.m03197 potassium channel protein 1 (AKT1) iden... 29 8.3
At1g61950.1 68414.m06988 calcium-dependent protein kinase, putat... 29 8.3
>At3g57550.1 68416.m06408 guanylate kinase 2 (GK-2) identical to
guanylate kinase (GK-2) [Arabidopsis thaliana]
gi|7861798|gb|AAF70409
Length = 389
Score = 103 bits (248), Expect = 2e-22
Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 4/199 (2%)
Query: 321 RSSVQLEGAELALYEEVARTPPFLRRVLALVGTRGVGRRTLKNRLIQDYPDRFGAVVPHT 380
R +L G E+ + + R + + + G GVG+ TL + L++++P FG V HT
Sbjct: 115 REQKKLLGREVVAWSKGVRGNA--EKPIVISGPSGVGKGTLISMLMKEFPSMFGFSVSHT 172
Query: 381 SRPPRPMEENGQSYWFVSREEMERDAHAGRFLEYGEHNGNLYGTHLDSIRAVIKEGKMCI 440
+R PR ME+NG Y F + ME++ G+FLE+ +GNLYGT ++S+ V GK CI
Sbjct: 173 TRAPRCMEKNGVHYHFTDKTVMEKEIKDGKFLEFASVHGNLYGTSIESVEVVTDSGKRCI 232
Query: 441 LDCAPQSLKLLHNSSEFLPYVVMITAPGIEQLKNLTHASNRNLTFDRQSSIRYSSRRART 500
LD Q + + +S + + P +++L++ A Q +R + +
Sbjct: 233 LDIDVQGARSV-KASSLDAIFIFVCPPSMKELEDRLRARGTETEEQIQKRLRNADAEIKA 291
Query: 501 LESLASLYEEEDLKQTLEE 519
+S + ++E + LEE
Sbjct: 292 GKS-SGIFEHKLYNDNLEE 309
>At2g41880.1 68415.m05179 guanylate kinase 1 (GK-1) identical to
guanylate kinase (GK-1) [Arabidopsis thaliana]
gi|7861795|gb|AAF70408
Length = 387
Score = 103 bits (248), Expect = 2e-22
Identities = 82/296 (27%), Positives = 138/296 (46%), Gaps = 21/296 (7%)
Query: 214 DGVHIESEEQLKEAVAKPNDRVTLKVGPNLKEKSSQLTNKLTISDRKDPNWWQASHVERP 273
+GV ++SE + E DR+ L G + + + + + I D+ NW+ P
Sbjct: 18 NGVCVKSEPENTEITVDVGDRIFLIGGTH---ERNNFSIGVQIYDKISNNWFS------P 68
Query: 274 EIVGLIPSPELEERRKAYVPPEADFVHKISICGARISRKKKKFVYESRSSVQLEGAELAL 333
++G P P + A+V + +I + R + E S E +L
Sbjct: 69 IVLGTGPKPS--KGYSAFVLEQG----RILVIKKGSPRNDSIWFLEVDSPYVREQKKLLR 122
Query: 334 YEEVARTPPF---LRRVLALVGTRGVGRRTLKNRLIQDYPDRFGAVVPHTSRPPRPMEEN 390
E VA + + + + G GVG+ TL + L++++P FG V HT+R PR ME +
Sbjct: 123 KEVVAWSKGVRGNAEKPIVISGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRSPRSMEMD 182
Query: 391 GQSYWFVSREEMERDAHAGRFLEYGEHNGNLYGTHLDSIRAVIKEGKMCILDCAPQSLKL 450
G Y F ++ ME++ G+FLE+ +GNLYGT ++S+ AV GK CILD Q +
Sbjct: 183 GVHYHFADKKVMEKEIKDGKFLEFASVHGNLYGTSIESVEAVTDSGKRCILDIDVQGARS 242
Query: 451 LHNSSEFLPYVVMITAPGIEQLKNLTHASNRNLTFDRQSSIRYSSRRARTLESLAS 506
+ SS + + P +++L++ A R + Q R + A E ++S
Sbjct: 243 VRASS-LDAIFIFVCPPSMKELEDRLRA--RGTETEEQIQKRLRNAEAEIKEGISS 295
>At3g06200.1 68416.m00713 guanylate kinase, putative similar to
guanylate kinase (GMP kinase) [Bacillus halodurans]
Swiss-Prot:Q9K9Y2; contains Pfam profile: PF00625
guanylate kinase
Length = 282
Score = 52.4 bits (120), Expect = 8e-07
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 341 PPFLRRVLALVGTRGVGRRTLKNRLIQDYPDRFGAVVPHTSRPPRPMEENGQSYWFVSRE 400
PP + V+ + G GVG+ + N+L ++ + VV TSRP RP E +G+ Y+FVSR+
Sbjct: 84 PPPNQIVIVISGPSGVGKDAVINKL-REVREGLHFVVTATSRPMRPGEVDGKDYFFVSRD 142
Query: 401 EMERDAHAGRFLEYGEHNGNLYGTHLDSIRAVIKEGKMCILDC---APQSL-KLLHNSSE 456
+ LEY G G I+ + +G+ +L Q+L ++L NS+
Sbjct: 143 QFLSMVENEELLEYALVYGEYKGIPKKQIQEFMAKGEDIVLRVDIQGAQTLRRILGNSAV 202
Query: 457 FLPYVVMITAPGIEQL 472
F+ V +E+L
Sbjct: 203 FIFLVAESELAMVERL 218
>At5g26570.1 68418.m03152 glycoside hydrolase starch-binding
domain-containing protein similar to SEX1 (starch
excess) [Arabidopsis thaliana] GI:12044358; contains
Pfam profile PF00686: Starch binding domain
Length = 1191
Score = 34.7 bits (76), Expect = 0.17
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Query: 230 KPNDRVTLKVGPNLKEKSSQLTN-KLTISDRKDPNWWQASHVERPEIVGLIPSPELEERR 288
+ ND +VG N + T K+ DR NWW+ + R IVG S E EER
Sbjct: 227 RSNDHGNREVGRNWDTSGLEGTALKMVEGDRNSKNWWRKLEMVREVIVG---SVEREERL 283
Query: 289 KAYV 292
KA +
Sbjct: 284 KALI 287
>At5g58940.1 68418.m07383 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 466
Score = 32.3 bits (70), Expect = 0.89
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 45 IFLKSIVESPDFARKYGCADSEEDLLVKPVSLGNVNIIRSLSEYRGNNIRTIEQAELAII 104
I+ S +E + + YG + ++ ++ + N N+ L RGN + E+ E+AI
Sbjct: 190 IYTLSKIEHMNLVKLYGFLEHGDEKVIVVEYVANGNLREHLDGLRGNRLEMAERLEIAID 249
Query: 105 VSRA 108
V+ A
Sbjct: 250 VAHA 253
>At3g53270.4 68416.m05874 expressed protein endopeptidase Clp
ATP-binding chain C, Chlamydia pneumoniae, PIR:G72079
Length = 280
Score = 31.5 bits (68), Expect = 1.5
Identities = 20/79 (25%), Positives = 33/79 (41%)
Query: 451 LHNSSEFLPYVVMITAPGIEQLKNLTHASNRNLTFDRQSSIRYSSRRARTLESLASLYEE 510
L N+ Y +I I Q +L +L + SI Y+ + R +E + E
Sbjct: 153 LQNARVRFAYEKLICDTSINQFIHLDMGKEVDLNSLDKMSIEYAEAKKRAVEGAGEIMEI 212
Query: 511 EDLKQTLEESARIQRQYEK 529
+D+K EE + + EK
Sbjct: 213 DDIKHISEEKELMGERMEK 231
>At3g53270.3 68416.m05873 expressed protein endopeptidase Clp
ATP-binding chain C, Chlamydia pneumoniae, PIR:G72079
Length = 280
Score = 31.5 bits (68), Expect = 1.5
Identities = 20/79 (25%), Positives = 33/79 (41%)
Query: 451 LHNSSEFLPYVVMITAPGIEQLKNLTHASNRNLTFDRQSSIRYSSRRARTLESLASLYEE 510
L N+ Y +I I Q +L +L + SI Y+ + R +E + E
Sbjct: 153 LQNARVRFAYEKLICDTSINQFIHLDMGKEVDLNSLDKMSIEYAEAKKRAVEGAGEIMEI 212
Query: 511 EDLKQTLEESARIQRQYEK 529
+D+K EE + + EK
Sbjct: 213 DDIKHISEEKELMGERMEK 231
>At3g53270.2 68416.m05872 expressed protein endopeptidase Clp
ATP-binding chain C, Chlamydia pneumoniae, PIR:G72079
Length = 280
Score = 31.5 bits (68), Expect = 1.5
Identities = 20/79 (25%), Positives = 33/79 (41%)
Query: 451 LHNSSEFLPYVVMITAPGIEQLKNLTHASNRNLTFDRQSSIRYSSRRARTLESLASLYEE 510
L N+ Y +I I Q +L +L + SI Y+ + R +E + E
Sbjct: 153 LQNARVRFAYEKLICDTSINQFIHLDMGKEVDLNSLDKMSIEYAEAKKRAVEGAGEIMEI 212
Query: 511 EDLKQTLEESARIQRQYEK 529
+D+K EE + + EK
Sbjct: 213 DDIKHISEEKELMGERMEK 231
>At3g53270.1 68416.m05871 expressed protein endopeptidase Clp
ATP-binding chain C, Chlamydia pneumoniae, PIR:G72079
Length = 280
Score = 31.5 bits (68), Expect = 1.5
Identities = 20/79 (25%), Positives = 33/79 (41%)
Query: 451 LHNSSEFLPYVVMITAPGIEQLKNLTHASNRNLTFDRQSSIRYSSRRARTLESLASLYEE 510
L N+ Y +I I Q +L +L + SI Y+ + R +E + E
Sbjct: 153 LQNARVRFAYEKLICDTSINQFIHLDMGKEVDLNSLDKMSIEYAEAKKRAVEGAGEIMEI 212
Query: 511 EDLKQTLEESARIQRQYEK 529
+D+K EE + + EK
Sbjct: 213 DDIKHISEEKELMGERMEK 231
>At5g44080.1 68418.m05393 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription factor
Length = 315
Score = 30.7 bits (66), Expect = 2.7
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 469 IEQLKNLTHASNRNLTFDRQSSIRYSSRRAR---TLESLASLYEEEDLKQTLEESARIQR 525
+E L R + +R+S+ R R+ LE+LA+ EEE+ + E + +
Sbjct: 224 VEPLDKAAAQRQRRMIKNRESAARSRERKQAYQVELEALAAKLEEENELLSKEIEDKRKE 283
Query: 526 QYEKYIDFVI 535
+Y+K ++FVI
Sbjct: 284 RYQKLMEFVI 293
>At1g76290.1 68414.m08860 AMP-dependent synthetase and ligase family
protein similar to AMP-binding protein GI:1903034 from
[Brassica napus]; contains Pfam AMP-binding domain
PF00501
Length = 546
Score = 30.7 bits (66), Expect = 2.7
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 503 SLASLYEEEDLKQTLEESARIQRQYEKYIDFVITNN 538
SL S EE+ L T+ E+ Q +YE+Y DF+ T N
Sbjct: 130 SLLSNIEEKPLIITITENPTEQSKYEQYEDFLSTGN 165
>At5g19340.1 68418.m02305 expressed protein
Length = 263
Score = 30.3 bits (65), Expect = 3.6
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 233 DRVTLKVGPN--LKEKSSQLTNKLTISDRKDPNWWQASHVERPEIVGLIPSPELEERRKA 290
D+ ++K G L E ++ L+ S+ K +WQ H E+ + V L P E+++ +
Sbjct: 53 DKSSVKAGDFEFLSENATMLSADELFSEGKLLPFWQVKHSEKLKNVTLKPKVEVQQEEED 112
Query: 291 Y-VPPEADFVH 300
+ V E FVH
Sbjct: 113 HKVVNEEGFVH 123
>At3g50950.2 68416.m05579 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 852
Score = 30.3 bits (65), Expect = 3.6
Identities = 19/80 (23%), Positives = 37/80 (46%)
Query: 289 KAYVPPEADFVHKISICGARISRKKKKFVYESRSSVQLEGAELALYEEVARTPPFLRRVL 348
K+ V P +F+ ++ + + VY+ V LEG + + E + R+ ++
Sbjct: 126 KSQVEPYFEFITPSNVGRDNGTDRWSSPVYDHTQVVGLEGDKRKIKEWLFRSNDSQLLIM 185
Query: 349 ALVGTRGVGRRTLKNRLIQD 368
A VG G+G+ T+ + D
Sbjct: 186 AFVGMGGLGKTTIAQEVFND 205
>At3g50950.1 68416.m05578 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 852
Score = 30.3 bits (65), Expect = 3.6
Identities = 19/80 (23%), Positives = 37/80 (46%)
Query: 289 KAYVPPEADFVHKISICGARISRKKKKFVYESRSSVQLEGAELALYEEVARTPPFLRRVL 348
K+ V P +F+ ++ + + VY+ V LEG + + E + R+ ++
Sbjct: 126 KSQVEPYFEFITPSNVGRDNGTDRWSSPVYDHTQVVGLEGDKRKIKEWLFRSNDSQLLIM 185
Query: 349 ALVGTRGVGRRTLKNRLIQD 368
A VG G+G+ T+ + D
Sbjct: 186 AFVGMGGLGKTTIAQEVFND 205
>At5g67570.1 68418.m08520 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 611
Score = 29.9 bits (64), Expect = 4.7
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 487 RQSSIRYSSRRA-RTLESLASLYEEEDLKQTLEESARIQRQYEKYIDF 533
R+ I+ +RR R ES A +Y E KQ++EE AR Q +Y F
Sbjct: 46 RKKEIQKHNRRTKRETESEAEVYTEAQ-KQSMEEEARFQTLRREYKQF 92
>At5g24050.1 68418.m02825 hypothetical protein contains Pfam profile
PF03754: Domain of unknown function (DUF313)
Length = 349
Score = 29.9 bits (64), Expect = 4.7
Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 293 PPEADFVHKISICGARISRKKKKFVYESRSSVQLEGAELALYEEVAR-TPPFLRRVL 348
PP +F +S+C + +K++ V + + S ++ A +A + + AR TP +L +V+
Sbjct: 151 PPNPNFPCTMSLCLMENTSRKRRAVEQRKRSGGVKKANVAPFSQTARETPEWLVKVM 207
>At3g01510.1 68416.m00077 5'-AMP-activated protein kinase beta-1
subunit-related contains similarity to Swiss-Prot:P80387
5'-AMP-activated protein kinase, beta-1 subunit (AMPK
beta-1 chain) (AMPKb) (40 kDa subunit) [Sus scrofa]
Length = 591
Score = 29.9 bits (64), Expect = 4.7
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 173 QPLGLTVTTDEHGQLIVARILAGSAAAKQALVSVGDVL 210
+PLG+ G++ V I GS A K ++ VGD L
Sbjct: 83 KPLGIRFALSADGKIFVHAIKKGSNAEKARIIMVGDTL 120
>At5g23080.1 68418.m02698 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 930
Score = 29.5 bits (63), Expect = 6.2
Identities = 29/135 (21%), Positives = 54/135 (40%), Gaps = 9/135 (6%)
Query: 131 IDDKLIPNEFPDLIEFSKESPEGNGDMPIETVKVV---GLRKVPGQPLGLTVTTDEHGQL 187
+ + +P + + E E N + P++ K + QP+ + + +
Sbjct: 689 VSESQVPKKETSIEEPEVEVEVENVERPVDLYKAIFSDDSEDDEDQPMNGKIQEGQEKKN 748
Query: 188 IVARILAGSAAAKQALVSVGDVLLEVDGVHIESEEQLKEAVAKPNDRVTLKVG-PNLKEK 246
A A L S+G L G + EE++K +KP D ++ P LKEK
Sbjct: 749 EAAATTLNRLIAGDFLESLGKEL----GFEVPMEEEIKSR-SKPEDSSDKRLDRPGLKEK 803
Query: 247 SSQLTNKLTISDRKD 261
+ T+ LT+ ++
Sbjct: 804 VEEKTSSLTLGSEEE 818
>At2g22010.1 68415.m02614 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 1280
Score = 29.5 bits (63), Expect = 6.2
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 512 DLKQTLEESARIQRQYEKYIDFVITNNNSDTTFSKILDALHALSTDHQWVPVSWIY 567
DLK L +S + QY++Y++ NN + T AL A + W+PV+ I+
Sbjct: 909 DLKDLLLQSISVLVQYKEYLE-AFENNEAATRHMPA--ALLAAFDNRSWIPVTNIF 961
>At1g49820.1 68414.m05586 5-methylthioribose kinase family
contains TIGRfam TIGR01767: 5-methylthioribose kinase
profile
Length = 420
Score = 29.5 bits (63), Expect = 6.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 50 IVESPDFARKYGCADSEEDLLVKPVSLGNVNII 82
I +P + K G S++DL++K V GN+N +
Sbjct: 18 IKSTPALSSKIGADKSDDDLVIKEVGDGNLNFV 50
>At1g10390.1 68414.m01171 nucleoporin family protein contains Pfam
profiles: PF04096 nucleoporin autopeptidase, PF03093
nucleoporin FG repeat family
Length = 1041
Score = 29.5 bits (63), Expect = 6.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 359 RTLKNRLIQDYPDRFGAVVPHTSRPPRPMEENGQS 393
R L R +Q + R +++P RP P+ +NG+S
Sbjct: 770 RALVIRPVQQWSSRDKSILPKEQRPTAPLHDNGKS 804
>At1g07380.1 68414.m00787 ceramidase family protein contains
similarity to mitochondrial ceramidase [Homo sapiens]
gi|9246993|gb|AAF86240
Length = 779
Score = 29.5 bits (63), Expect = 6.2
Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 10/102 (9%)
Query: 390 NGQSYWFVSREEMERDAHAGRFLEYGEHNGNLYGTHLDSIRAVIKEGKMCILDC----AP 445
NG S + + EE + + G YG H + Y I+ K K +LD P
Sbjct: 577 NGYSQYVTTFEEYQVQRYEGASTLYGPHTLSGY------IQEFKKLSKSLVLDMPVQPGP 630
Query: 446 QSLKLLHNSSEFLPYVVMITAPGIEQLKNLTHASNRNLTFDR 487
Q LL FL V+M T P + ++ +NL+ R
Sbjct: 631 QPPDLLDKQLSFLTPVMMDTTPSGDSFGDVISDVPKNLSLKR 672
>At2g47670.1 68415.m05953 invertase/pectin methylesterase inhibitor
family protein low similarity to pectinesterase from
Lycopersicon esculentum SP|Q43143, Arabidopsis thaliana
SP|Q42534; contains Pfam profile PF04043: Plant
invertase/pectin methylesterase inhibitor
Length = 208
Score = 29.1 bits (62), Expect = 8.3
Identities = 23/105 (21%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 422 YGTHLDSIRAVIKEGKMCILDCAPQSLKLLHNSSEFLPYVVMITAPGIEQLKNLTHASNR 481
Y T++ + V + ++C+ P ++ +N+S++ V +T +++ L + R
Sbjct: 45 YSTYVRNACNVTRYNRLCVRTLWPFAIVARNNTSKWARASVAVTITDTKRVLRLLLKTQR 104
Query: 482 NLTFDRQSSIRYSSRRARTLESLASLYEEEDLKQTLEESARIQRQ 526
+ + + I S R ++SL +LY+ + +TL + QRQ
Sbjct: 105 SAVGESE-RIALSDCRELFVDSLDNLYKSLAVLRTL-NADEFQRQ 147
>At2g26650.1 68415.m03197 potassium channel protein 1 (AKT1)
identical to AKT1 [Arabidopsis thaliana]
gi|563112|gb|AAA96810; member of the 1 pore, 6
transmembrane (1P/6TM- Shaker-type) K+ channel family,
PMID:11500563
Length = 857
Score = 29.1 bits (62), Expect = 8.3
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 75 SLGNVNIIRSLSEYRGNNIRTIEQAELAIIVSRAHFKALIEAHDQIGKIWLERGSGID 132
S G +N + L EY + AE ++ + ++A++E H+++ K+ LE GS ID
Sbjct: 560 SKGTLNCVLLLLEYHADP--NCRDAEGSVPL----WEAMVEGHEKVVKVLLEHGSTID 611
>At1g61950.1 68414.m06988 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase GI:3283996 from [Nicotiana tabacum]; contains
protein kinase domain, Pfam:PF00069; contains EF hand
domain (calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 551
Score = 29.1 bits (62), Expect = 8.3
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 470 EQLKNLTHASNRNLTFDRQSSIRYSSRRARTLESLASLYEEEDLKQTLEESARIQRQYEK 529
E+LK L N+ D+ +I Y ++ LE L S E ++KQ LE++
Sbjct: 400 EELKGLK-TMFANMDTDKSGTITYDELKSG-LEKLGSRLTETEVKQLLEDADVDGNGTID 457
Query: 530 YIDFVITNNN 539
YI+F+ N
Sbjct: 458 YIEFISATMN 467
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.134 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,239,661
Number of Sequences: 28952
Number of extensions: 567205
Number of successful extensions: 1603
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1586
Number of HSP's gapped (non-prelim): 28
length of query: 567
length of database: 12,070,560
effective HSP length: 85
effective length of query: 482
effective length of database: 9,609,640
effective search space: 4631846480
effective search space used: 4631846480
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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