Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001333-TA|BGIBMGA001333-PA|IPR002042|Uricase
         (337 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D86987-1|BAA34389.2|  790|Homo sapiens KIAA0214 protein protein.       32   2.5  
BC017061-1|AAH17061.1|  757|Homo sapiens mitofusin 2 protein.          32   2.5  
AY028429-1|AAK18728.1|  757|Homo sapiens mitochondrial assembly ...    32   2.5  
AL096840-8|CAI19087.2|  757|Homo sapiens mitofusin 2 protein.          32   2.5  
AF036536-1|AAD02058.2|  757|Homo sapiens CPRP1 protein.                32   2.5  

>D86987-1|BAA34389.2|  790|Homo sapiens KIAA0214 protein protein.
          Length = 790

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 6/121 (4%)

Query: 176 HEAVVVKSGLSGLRVLKTTQSAFVDFVQDEYTTLTDAVERIFSTIVEAEWIYDNMRTADF 235
           HEA ++  G    R  KT         QD+       V  ++    +   + D++   D 
Sbjct: 175 HEAFLLTEGSEEKRSAKTVNQLAHALHQDKQLHAGSLVSVMWPNS-KCPLLKDDLVLMDS 233

Query: 236 DNAWLTVK-DAILDKFAGPPDTGVYSPSVQHTLYQAEKTVLEKVSEITWIKMTMPNKHYL 294
               +T + D+ +DKF    D  V   + + TL Q EK    KVSE    +++ PN   L
Sbjct: 234 PGIDVTTELDSWIDKFCLDADVFVLVANSESTLMQTEKHFFHKVSE----RLSRPNIFIL 289

Query: 295 N 295
           N
Sbjct: 290 N 290


>BC017061-1|AAH17061.1|  757|Homo sapiens mitofusin 2 protein.
          Length = 757

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 6/121 (4%)

Query: 176 HEAVVVKSGLSGLRVLKTTQSAFVDFVQDEYTTLTDAVERIFSTIVEAEWIYDNMRTADF 235
           HEA ++  G    R  KT         QD+       V  ++    +   + D++   D 
Sbjct: 142 HEAFLLTEGSEEKRSAKTVNQLAHALHQDKQLHAGSLVSVMWPNS-KCPLLKDDLVLMDS 200

Query: 236 DNAWLTVK-DAILDKFAGPPDTGVYSPSVQHTLYQAEKTVLEKVSEITWIKMTMPNKHYL 294
               +T + D+ +DKF    D  V   + + TL Q EK    KVSE    +++ PN   L
Sbjct: 201 PGIDVTTELDSWIDKFCLDADVFVLVANSESTLMQTEKHFFHKVSE----RLSRPNIFIL 256

Query: 295 N 295
           N
Sbjct: 257 N 257


>AY028429-1|AAK18728.1|  757|Homo sapiens mitochondrial assembly
           regulatory factor protein.
          Length = 757

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 6/121 (4%)

Query: 176 HEAVVVKSGLSGLRVLKTTQSAFVDFVQDEYTTLTDAVERIFSTIVEAEWIYDNMRTADF 235
           HEA ++  G    R  KT         QD+       V  ++    +   + D++   D 
Sbjct: 142 HEAFLLTEGSEEKRSAKTVNQLAHALHQDKQLHAGSLVSVMWPNS-KCPLLKDDLVLMDS 200

Query: 236 DNAWLTVK-DAILDKFAGPPDTGVYSPSVQHTLYQAEKTVLEKVSEITWIKMTMPNKHYL 294
               +T + D+ +DKF    D  V   + + TL Q EK    KVSE    +++ PN   L
Sbjct: 201 PGIDVTTELDSWIDKFCLDADVFVLVANSESTLMQTEKHFFHKVSE----RLSRPNIFIL 256

Query: 295 N 295
           N
Sbjct: 257 N 257


>AL096840-8|CAI19087.2|  757|Homo sapiens mitofusin 2 protein.
          Length = 757

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 6/121 (4%)

Query: 176 HEAVVVKSGLSGLRVLKTTQSAFVDFVQDEYTTLTDAVERIFSTIVEAEWIYDNMRTADF 235
           HEA ++  G    R  KT         QD+       V  ++    +   + D++   D 
Sbjct: 142 HEAFLLTEGSEEKRSAKTVNQLAHALHQDKQLHAGSLVSVMWPNS-KCPLLKDDLVLMDS 200

Query: 236 DNAWLTVK-DAILDKFAGPPDTGVYSPSVQHTLYQAEKTVLEKVSEITWIKMTMPNKHYL 294
               +T + D+ +DKF    D  V   + + TL Q EK    KVSE    +++ PN   L
Sbjct: 201 PGIDVTTELDSWIDKFCLDADVFVLVANSESTLMQTEKHFFHKVSE----RLSRPNIFIL 256

Query: 295 N 295
           N
Sbjct: 257 N 257


>AF036536-1|AAD02058.2|  757|Homo sapiens CPRP1 protein.
          Length = 757

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 6/121 (4%)

Query: 176 HEAVVVKSGLSGLRVLKTTQSAFVDFVQDEYTTLTDAVERIFSTIVEAEWIYDNMRTADF 235
           HEA ++  G    R  KT         QD+       V  ++    +   + D++   D 
Sbjct: 142 HEAFLLTEGSEEKRSAKTVNQLAHALHQDKQLHAGSLVSVMWPNS-KCPLLKDDLVLMDS 200

Query: 236 DNAWLTVK-DAILDKFAGPPDTGVYSPSVQHTLYQAEKTVLEKVSEITWIKMTMPNKHYL 294
               +T + D+ +DKF    D  V   + + TL Q EK    KVSE    +++ PN   L
Sbjct: 201 PGIDVTTELDSWIDKFCLDADVFVLVANSESTLMQTEKHFFHKVSE----RLSRPNIFIL 256

Query: 295 N 295
           N
Sbjct: 257 N 257


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.317    0.132    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,657,542
Number of Sequences: 224733
Number of extensions: 2034069
Number of successful extensions: 8330
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 8330
Number of HSP's gapped (non-prelim): 5
length of query: 337
length of database: 73,234,838
effective HSP length: 90
effective length of query: 247
effective length of database: 53,008,868
effective search space: 13093190396
effective search space used: 13093190396
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 66 (30.7 bits)