GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001333-TA|BGIBMGA001333-PA|IPR002042|Uricase
         (337 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    25   4.0  
AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     24   5.3  

>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query: 286 MTMPNKHYLNIDMSKFPVNVTKG 308
           +TM  +  L I++ KF VN+T G
Sbjct: 519 LTMDEQRLLMIELDKFRVNLTPG 541


>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 16/59 (27%), Positives = 22/59 (37%), Gaps = 2/59 (3%)

Query: 228 DNMRTADFDNAWLTVKDAIL--DKFAGPPDTGVYSPSVQHTLYQAEKTVLEKVSEITWI 284
           D   +  F + W TVKD +L          T          +Y    TV  +V  +TWI
Sbjct: 230 DGRTSKGFKSEWATVKDQVLYVGSMGKEWTTSAGDFETHDPMYVKAVTVHGEVYHLTWI 288


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.132    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 352,389
Number of Sequences: 2123
Number of extensions: 14347
Number of successful extensions: 72
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 71
Number of HSP's gapped (non-prelim): 2
length of query: 337
length of database: 516,269
effective HSP length: 64
effective length of query: 273
effective length of database: 380,397
effective search space: 103848381
effective search space used: 103848381
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 48 (23.4 bits)