GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001332-TA|BGIBMGA001332-PA|undefined
         (198 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    27   0.10 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   5.0  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 27.1 bits (57), Expect = 0.10
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 6/69 (8%)

Query: 75  AAFANLPMIPWAEV-CLVYT-GGSWSIWLATREGAWGWLADSFTHYFRMALVHLGLPGWQ 132
           A F  + ++P+  + CL+Y  GG W +         G +A      F+MAL H+G     
Sbjct: 208 AHFKIIQVVPYCYINCLIYLIGGFWFMQC----DVVGKVASQLAEDFQMALKHVGPSSQV 263

Query: 133 AAFANLPMI 141
           A + +L M+
Sbjct: 264 ADYRSLWML 272



 Score = 23.8 bits (49), Expect = 0.94
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 5/54 (9%)

Query: 31  CLVYT-GGSWSIWLATREGAWGWLADSFTHYFRMALVHLGLPGWQAAFANLPMI 83
           CL+Y  GG W +         G +A      F+MAL H+G     A + +L M+
Sbjct: 223 CLIYLIGGFWFMQC----DVVGKVASQLAEDFQMALKHVGPSSQVADYRSLWML 272


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/30 (30%), Positives = 14/30 (46%)

Query: 147 LFLLLAPHLLEKADSENNSASVNNETGLNH 176
           +F+ L  H     +   +S   NN TG+ H
Sbjct: 152 IFVALLEHCFSMLNYVYSSKCENNSTGVEH 181


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.135    0.470 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,844
Number of Sequences: 317
Number of extensions: 2336
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 198
length of database: 114,650
effective HSP length: 54
effective length of query: 144
effective length of database: 97,532
effective search space: 14044608
effective search space used: 14044608
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 41 (20.6 bits)