GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001332-TA|BGIBMGA001332-PA|undefined
         (198 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069203-1|AAL39348.1|  290|Drosophila melanogaster GH25848p pro...    83   2e-16
AE014296-2074|AAF49975.1|  290|Drosophila melanogaster CG6931-PA...    83   2e-16
AE014298-3220|ABI31006.1| 1470|Drosophila melanogaster CG40500-P...    29   5.7  
AE014298-3219|ABI31005.1| 1626|Drosophila melanogaster CG40500-P...    29   5.7  
AE014298-3218|EAL24565.1| 1741|Drosophila melanogaster CG40500-P...    29   5.7  
AE014298-3217|ABI31004.1| 1513|Drosophila melanogaster CG40500-P...    29   5.7  

>AY069203-1|AAL39348.1|  290|Drosophila melanogaster GH25848p
           protein.
          Length = 290

 Score = 83.4 bits (197), Expect = 2e-16
 Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 5/113 (4%)

Query: 86  AEVCLVYTGGSWS----IWLATREGAWGWLADSFTHYFRMALVHLGLPGWQAAFANLPMI 141
           A+VC++Y   S +      L     +W +LAD+F+ Y RMA+ HLGLP W+  F+   + 
Sbjct: 169 AKVCMLYESTSSNNPKFYLLELSTLSWQFLADTFSEYLRMAIAHLGLPYWELCFSTCGLP 228

Query: 142 PWAEQLFLLLAPHLLEKADSENNSA-SVNNETGLNHIDPNIFKTSARHHKNAT 193
            W EQLFLLLAPHLLE+ +       +   E   N IDPNIF+   +    AT
Sbjct: 229 SWTEQLFLLLAPHLLEEHEPRRGRVLNPACEHPYNIIDPNIFRGKPKSVAKAT 281



 Score = 66.5 bits (155), Expect = 2e-11
 Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 10  PVLNTKSKVFELDICRYIGKVCLVYTGGSWS----IWLATREGAWGWLADSFTHYFRMAL 65
           P++  KSK+FE++    + KVC++Y   S +      L     +W +LAD+F+ Y RMA+
Sbjct: 151 PIITAKSKIFEINNVNEVAKVCMLYESTSSNNPKFYLLELSTLSWQFLADTFSEYLRMAI 210

Query: 66  VHLGLPGWQAAFANLPMIPWAE 87
            HLGLP W+  F+   +  W E
Sbjct: 211 AHLGLPYWELCFSTCGLPSWTE 232


>AE014296-2074|AAF49975.1|  290|Drosophila melanogaster CG6931-PA
           protein.
          Length = 290

 Score = 83.4 bits (197), Expect = 2e-16
 Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 5/113 (4%)

Query: 86  AEVCLVYTGGSWS----IWLATREGAWGWLADSFTHYFRMALVHLGLPGWQAAFANLPMI 141
           A+VC++Y   S +      L     +W +LAD+F+ Y RMA+ HLGLP W+  F+   + 
Sbjct: 169 AKVCMLYESTSSNNPKFYLLELSTLSWQFLADTFSEYLRMAIAHLGLPYWELCFSTCGLP 228

Query: 142 PWAEQLFLLLAPHLLEKADSENNSA-SVNNETGLNHIDPNIFKTSARHHKNAT 193
            W EQLFLLLAPHLLE+ +       +   E   N IDPNIF+   +    AT
Sbjct: 229 SWTEQLFLLLAPHLLEEHEPRRGRVLNPACEHPYNIIDPNIFRGKPKSVAKAT 281



 Score = 66.5 bits (155), Expect = 2e-11
 Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 10  PVLNTKSKVFELDICRYIGKVCLVYTGGSWS----IWLATREGAWGWLADSFTHYFRMAL 65
           P++  KSK+FE++    + KVC++Y   S +      L     +W +LAD+F+ Y RMA+
Sbjct: 151 PIITAKSKIFEINNVNEVAKVCMLYESTSSNNPKFYLLELSTLSWQFLADTFSEYLRMAI 210

Query: 66  VHLGLPGWQAAFANLPMIPWAE 87
            HLGLP W+  F+   +  W E
Sbjct: 211 AHLGLPYWELCFSTCGLPSWTE 232


>AE014298-3220|ABI31006.1| 1470|Drosophila melanogaster CG40500-PD,
           isoform D protein.
          Length = 1470

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 7/54 (12%)

Query: 135 FANLPMIPWAEQLFLLLAPHLLEKADSENNSASVN----NETGLNHIDPNIFKT 184
           F+NLP +    ++FL     L   AD+  NS +V+        + HIDPN+F T
Sbjct: 204 FSNLPQL---REVFLSENNILELPADAFTNSTNVDVIYLESNAIAHIDPNVFST 254


>AE014298-3219|ABI31005.1| 1626|Drosophila melanogaster CG40500-PB,
           isoform B protein.
          Length = 1626

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 7/54 (12%)

Query: 135 FANLPMIPWAEQLFLLLAPHLLEKADSENNSASVN----NETGLNHIDPNIFKT 184
           F+NLP +    ++FL     L   AD+  NS +V+        + HIDPN+F T
Sbjct: 204 FSNLPQL---REVFLSENNILELPADAFTNSTNVDVIYLESNAIAHIDPNVFST 254


>AE014298-3218|EAL24565.1| 1741|Drosophila melanogaster CG40500-PA,
           isoform A protein.
          Length = 1741

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 7/54 (12%)

Query: 135 FANLPMIPWAEQLFLLLAPHLLEKADSENNSASVN----NETGLNHIDPNIFKT 184
           F+NLP +    ++FL     L   AD+  NS +V+        + HIDPN+F T
Sbjct: 204 FSNLPQL---REVFLSENNILELPADAFTNSTNVDVIYLESNAIAHIDPNVFST 254


>AE014298-3217|ABI31004.1| 1513|Drosophila melanogaster CG40500-PC,
           isoform C protein.
          Length = 1513

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 7/54 (12%)

Query: 135 FANLPMIPWAEQLFLLLAPHLLEKADSENNSASVN----NETGLNHIDPNIFKT 184
           F+NLP +    ++FL     L   AD+  NS +V+        + HIDPN+F T
Sbjct: 204 FSNLPQL---REVFLSENNILELPADAFTNSTNVDVIYLESNAIAHIDPNVFST 254


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.323    0.135    0.470 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,550,855
Number of Sequences: 52641
Number of extensions: 434055
Number of successful extensions: 954
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 946
Number of HSP's gapped (non-prelim): 8
length of query: 198
length of database: 24,830,863
effective HSP length: 81
effective length of query: 117
effective length of database: 20,566,942
effective search space: 2406332214
effective search space used: 2406332214
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 59 (27.9 bits)