Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001331-TA|BGIBMGA001331-PA|undefined
         (296 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    24   1.6  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      24   1.6  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      24   1.6  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   4.8  

>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 13/40 (32%), Positives = 17/40 (42%)

Query: 44  GWSAXXXXXXXXXXSDMANGIHGRGSGQSGLELDSRKRGV 83
           G SA          S +A G+  R   QSG  L+   RG+
Sbjct: 187 GESAGAAAVHYLVLSPLAKGLFHRAIAQSGCALNGFARGI 226


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 13/40 (32%), Positives = 17/40 (42%)

Query: 44  GWSAXXXXXXXXXXSDMANGIHGRGSGQSGLELDSRKRGV 83
           G SA          S +A G+  R   QSG  L+   RG+
Sbjct: 185 GESAGAAAVHYLVLSPLAKGLFHRAIAQSGCALNGFARGI 224


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 13/40 (32%), Positives = 17/40 (42%)

Query: 44  GWSAXXXXXXXXXXSDMANGIHGRGSGQSGLELDSRKRGV 83
           G SA          S +A G+  R   QSG  L+   RG+
Sbjct: 187 GESAGAAAVHYLVLSPLAKGLFHRAIAQSGCALNGFARGI 226


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 12/40 (30%), Positives = 16/40 (40%)

Query: 44  GWSAXXXXXXXXXXSDMANGIHGRGSGQSGLELDSRKRGV 83
           G SA          S +A G+  R   QSG   +   RG+
Sbjct: 185 GESAGAAAVHYLVLSPLAKGLFHRAIAQSGCAFNGFARGI 224


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.313    0.132    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,579
Number of Sequences: 317
Number of extensions: 773
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 4
length of query: 296
length of database: 114,650
effective HSP length: 56
effective length of query: 240
effective length of database: 96,898
effective search space: 23255520
effective search space used: 23255520
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 43 (21.4 bits)