GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001331-TA|BGIBMGA001331-PA|undefined
         (296 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5KCD9 Cluster: Putative uncharacterized protein; n=1; ...    34   5.0  

>UniRef50_A5KCD9 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 982

 Score = 33.9 bits (74), Expect = 5.0
 Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 5/56 (8%)

Query: 23  ADQYGMMLPPNF---APNPMMSSGGWSAXXX--XXXXXXXSDMANGIHGRGSGQSG 73
           AD YG MLPP F    P  M S G +++             D   GI+G G G SG
Sbjct: 153 ADHYGGMLPPQFERRGPTGMSSQGNFASTNSIEHILRSIQEDTILGINGGGGGNSG 208


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.313    0.132    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,900,178
Number of Sequences: 1657284
Number of extensions: 3705525
Number of successful extensions: 3055
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3055
Number of HSP's gapped (non-prelim): 1
length of query: 296
length of database: 575,637,011
effective HSP length: 100
effective length of query: 196
effective length of database: 409,908,611
effective search space: 80342087756
effective search space used: 80342087756
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 72 (33.1 bits)