Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001330-TA|BGIBMGA001330-PA|IPR001202|WW/Rsp5/WWP
(734 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 37 0.050
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 35 0.27
01_06_1796 - 39932487-39932633,39933150-39933201,39933370-399334... 34 0.35
01_05_0199 - 19174971-19175105,19176302-19176628,19176813-191769... 34 0.47
05_01_0008 + 60498-60552,60644-60864,60956-61013,61271-61443,615... 33 0.82
04_04_1465 + 33794225-33794389,33794471-33794597,33794669-337947... 33 0.82
06_02_0046 + 10928708-10928798,10929997-10930077,10930567-109306... 32 1.4
12_01_0349 + 2677347-2677424,2677548-2677631,2677717-2677821,267... 32 1.9
04_04_0597 + 26502819-26502853,26503030-26503171,26503929-265041... 32 1.9
02_05_1269 + 35352825-35352888,35353645-35353968,35355062-353551... 31 2.5
01_06_1801 - 39954425-39954533,39955289-39955578,39955786-399568... 31 2.5
12_01_0794 + 7285100-7285369,7285931-7286338 31 3.3
02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-57... 31 3.3
02_01_0593 + 4408229-4408294,4408764-4409096,4409756-4409794,440... 31 4.4
08_02_1437 - 27096364-27097252,27098931-27099022,27099382-270996... 30 5.8
06_01_0397 + 2855273-2855347,2855515-2855606,2856317-2856347,285... 30 5.8
03_06_0399 - 33632811-33633107,33633236-33633385,33633705-336340... 30 5.8
11_03_0142 + 10675764-10675991,10676533-10676943 30 7.6
03_05_0734 - 27244802-27245536 30 7.6
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 37.1 bits (82), Expect = 0.050
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 61 PWSACYDEASGFTYYWNQQTNAVTWEAP 88
PW D +G+ YYWN +TN +E P
Sbjct: 22 PWRGLVDGTTGYLYYWNPETNITQYEKP 49
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 34.7 bits (76), Expect = 0.27
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 61 PWSACYDEASGFTYYWNQQTNAVTWEAP 88
PW D +G+ Y+WN +T AV ++ P
Sbjct: 26 PWRGLIDGNTGYLYFWNPETKAVQYDRP 53
>01_06_1796 -
39932487-39932633,39933150-39933201,39933370-39933495,
39933645-39933743,39934039-39934258,39934599-39934764,
39935108-39935161,39935527-39935657,39935747-39935818,
39936524-39936602,39936705-39936783,39936868-39936902,
39936986-39937111
Length = 461
Score = 34.3 bits (75), Expect = 0.35
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 53 HRAP-ISHCP--WSACYDEASGFTYYWNQQTNAVTWEAP 88
H+AP S P W D+++G YY+N T A WE P
Sbjct: 227 HQAPPSSSLPENWEEALDQSTGQKYYYNTNTQATQWEPP 265
Score = 30.7 bits (66), Expect = 4.4
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 62 WSACYDEASGFTYYWNQQTNAVTWEAP 88
W D SG +Y++NQ T W+ P
Sbjct: 192 WVEAKDPTSGASYFYNQSTGTTQWDRP 218
Score = 29.9 bits (64), Expect = 7.6
Identities = 18/68 (26%), Positives = 22/68 (32%)
Query: 565 EAPPGWTCDFLRAEGRYRYVRDSDGLVQWEYPAVATTDMDISTTPPHPGFEGKEEKREIG 624
E PPGW G + S G QW+ P M P E EE +
Sbjct: 187 ELPPGWVEAKDPTSGASYFYNQSTGTTQWDRPGAPLNTMQHQAPPSSSLPENWEEALDQS 246
Query: 625 DELTSFYN 632
+YN
Sbjct: 247 TGQKYYYN 254
>01_05_0199 -
19174971-19175105,19176302-19176628,19176813-19176915,
19178852-19178916,19179941-19180048,19180213-19180305,
19180395-19180442,19180801-19180899,19180980-19181096,
19181186-19181239,19181312-19181404,19181776-19181881,
19182050-19182084,19182173-19182259,19182385-19182462,
19182528-19182596,19182682-19182780,19183644-19183685,
19184498-19184570,19184654-19184982,19185070-19185127,
19185217-19185269,19186075-19186144,19186276-19186337,
19186452-19186540,19186906-19187011,19187110-19187178,
19187295-19187330
Length = 900
Score = 33.9 bits (74), Expect = 0.47
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 45 SEAARSGIHRAPISHCPWSACYDEASGFTYYWNQQTNAVTWEAPPEYLLALKIA 98
S A I+ + S W + A G YY+N++T +WE P E + L+ A
Sbjct: 94 SSATMPSINSSETSSSDWQE-HTSADGKKYYYNKKTRQSSWEKPAELMTPLERA 146
>05_01_0008 +
60498-60552,60644-60864,60956-61013,61271-61443,
61528-61711,61823-61993,62483-62514,62596-62638,
62768-62835,63561-63605,63695-64162
Length = 505
Score = 33.1 bits (72), Expect = 0.82
Identities = 12/43 (27%), Positives = 25/43 (58%)
Query: 444 IEGFSSERTGLGFTQEPMEDDCPKTTISYGNGLTFTKGETLNE 486
++ +S +R G G + +D CP+T +YG G +++ + N+
Sbjct: 354 MQQYSQQRIGYGSNSQLSDDGCPETQDNYGGGPSYSYHQNQNQ 396
>04_04_1465 +
33794225-33794389,33794471-33794597,33794669-33794799,
33795153-33795254,33795337-33795420,33795504-33795731,
33795934-33796038,33796376-33796731,33797146-33797303,
33797399-33797505,33797852-33798061
Length = 590
Score = 33.1 bits (72), Expect = 0.82
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 14/144 (9%)
Query: 345 SKPGSQTSSPHRDLSEHKTLFPSAKNIDDDVSNKDIPNNAEVEKPERSASP-------PE 397
S P + + L H LFPSAK++ D+S N EV+ + S P+
Sbjct: 374 SSPFDKLPTASNPLPSH--LFPSAKSVSTDLSQVPASQNTEVKVAILTVSDTVSLGAGPD 431
Query: 398 KSSNIYLSDLSETKEVVRKKLRISNSVLPDRSKTETPSYTTKYSQFIEGFSSERT--GLG 455
+S +S ++ + E + ++ +V+PD + + K+S I+ S T G G
Sbjct: 432 RSGPRAISVVNSSSEKLGGATVVATAVVPD-DVEKIKNILVKWSD-IDRVSLILTLGGTG 489
Query: 456 FTQEPMEDDCPKTTI-SYGNGLTF 478
FT + + K+ I GLT+
Sbjct: 490 FTPRDVTPEATKSVIEKEAPGLTY 513
>06_02_0046 +
10928708-10928798,10929997-10930077,10930567-10930685,
10931275-10931894,10931992-10933184,10933280-10933359,
10933751-10933846,10933931-10934004,10936007-10936151,
10936323-10936487
Length = 887
Score = 32.3 bits (70), Expect = 1.4
Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Query: 62 WSACYDEASGFTYYWNQQTNAVTWEAPPEYLLALKIAQQQLNMGGSSQVSAAEWQMYQQV 121
W E S YYWN T +WE P +LA +IA + +S + ++ M Q
Sbjct: 177 WKTIMHEQSNQCYYWNTVTGETSWEIP--NVLASEIAADSVT--SASAPTHVDYSMEAQA 232
Query: 122 LAEQQTKSQTQPPAI 136
A + P I
Sbjct: 233 HALTHNAVEAYPSDI 247
>12_01_0349 +
2677347-2677424,2677548-2677631,2677717-2677821,
2678217-2678363,2678987-2679244,2679337-2679468,
2679550-2679570
Length = 274
Score = 31.9 bits (69), Expect = 1.9
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 374 DVSNKDIPNNAEVEKPERSASPPEKSSNIYLSDLS--ETKEVVRKKLRISNSVLPDRSK 430
D N+ +P +K E A+ P K + + SD+S E +EV LR+ +L D ++
Sbjct: 163 DAINRAMPRKRIQKKRETKAAEPSKPNLVLKSDVSKVEDQEVSTAPLRVQEQLLDDETR 221
>04_04_0597 +
26502819-26502853,26503030-26503171,26503929-26504186,
26504276-26504407,26504834-26504980
Length = 237
Score = 31.9 bits (69), Expect = 1.9
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 374 DVSNKDIPNNAEVEKPERSASPPEKSSNIYLSDLS--ETKEVVRKKLRISNSVLPDRSK 430
D N+ +P +K E A+ P K + + SD+S E +EV LR+ +L D ++
Sbjct: 84 DAINRAMPRKRIQKKRETKAAEPSKPNLVLKSDVSKVEDQEVSTAPLRVQEQLLDDETR 142
>02_05_1269 +
35352825-35352888,35353645-35353968,35355062-35355183,
35355361-35355482,35355651-35355755,35356402-35356765,
35357181-35357321,35357619-35359109
Length = 910
Score = 31.5 bits (68), Expect = 2.5
Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Query: 381 PNNAEVEKPERSASPPEKSSNIYLSDLSETKEVVRKKLRISNSVLPDRSKTETPSYT-TK 439
P + + K + ASP K + +L T+EV R +S ++ T Y+ ++
Sbjct: 216 PRSKKARKVQLKASPSCKIWFVCKGNLICTREVNEGLNRTGSSTTSTTPRSSTSDYSRSR 275
Query: 440 YSQFIEGFSSERTGLGFTQEPMEDDCPKTTISYGNGL 476
S + SSE+ G+ EP +T I N +
Sbjct: 276 SSPRVHSLSSEQFGMQDPAEPTTSSVDQTPIREDNAM 312
>01_06_1801 - 39954425-39954533,39955289-39955578,39955786-39956838,
39956998-39957263,39957345-39957420,39957525-39957605,
39957676-39957831,39958565-39958669,39958761-39959367,
39959514-39959585,39959802-39959953,39960063-39960240,
39960642-39960745,39960822-39960953,39961036-39961132,
39961280-39961407,39961533-39961592,39962799-39962918,
39963011-39963091,39963173-39963361,39963826-39964024,
39964177-39964257,39964398-39964588,39965226-39965382,
39965986-39966119,39966266-39966334,39966434-39966481,
39966572-39966646,39967112-39967192,39967399-39967461,
39967564-39967623,39967754-39967795,39968777-39968902,
39969027-39969176
Length = 1843
Score = 31.5 bits (68), Expect = 2.5
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 13/137 (9%)
Query: 343 GNSKPGSQTSSPHRDLSEHKTLFPSAKNIDDDVSNK---DIPNNAEVEKPERSASPPEK- 398
G S +Q SSP RD E L +A ++ DD ++ DI + ++ S+ ++
Sbjct: 1657 GGSTRHNQRSSPRRDDKEKWHLEDNAASLQDDGKHRREEDIRDRKREDRDVSSSKVDDRD 1716
Query: 399 --SSNIYLSDLSETKEVVRKKLRISNSVLP----DRSKTETPSYTTKYSQFIEGFSSERT 452
S+I + R+K++ S L S + PS+ T SQ E ER
Sbjct: 1717 RDKSSIVKDESDPNSASKRRKIKRDQSGLEAGEYAPSAPQLPSHGTSSSQVFETRERERK 1776
Query: 453 GLGFTQEPME--DDCPK 467
G +Q + DD P+
Sbjct: 1777 G-AISQHRISHADDLPR 1792
>12_01_0794 + 7285100-7285369,7285931-7286338
Length = 225
Score = 31.1 bits (67), Expect = 3.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 62 WSACYDEASGFTYYWNQQTNAVTWEAPPEYLLALKI 97
W C D SG YY N++T +W P E + L++
Sbjct: 83 WEQCLDLQSGRMYYLNRKTLKKSWIRPKEQSVNLEL 118
>02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-579174,
579266-579370,579975-580028,580244-580344,580454-581423,
582030-582203,582341-582643,582719-582856,582993-583247,
584230-584370,585008-585289,585395-585540,585627-585690,
585723-585799,586285-586301,587728-587867,587972-588029,
588121-588218,588727-588776,589260-589743
Length = 2630
Score = 31.1 bits (67), Expect = 3.3
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 382 NNAEVEKPERSASP-PEKSSNIYLSDLSETKEVVRKKLRISNSVLPDRSKTETPSYTTKY 440
NN V +P+ S SP E S++ +L+ + T V K + ++ D +ET SYT +
Sbjct: 1712 NNQTVHQPDTSTSPLQEGSTSCHLTSVDATAGVTAK---VDDTAAADPLDSETQSYTAAH 1768
>02_01_0593 +
4408229-4408294,4408764-4409096,4409756-4409794,
4409870-4409937,4410024-4410068,4410478-4410655,
4410740-4410871,4410941-4411009,4411258-4411305,
4411498-4411545,4411654-4411763,4412044-4412125,
4412232-4412345
Length = 443
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 293 PELQEIIEDKHEEAIDNTNPPNDSID-DLLSEIEKTELP 330
P+L +I++ H+E + N P D D D L + ++ E+P
Sbjct: 353 PQLLRLIQENHDEFLQLINEPFDGADGDFLDQPDQDEMP 391
>08_02_1437 -
27096364-27097252,27098931-27099022,27099382-27099654,
27099872-27100819
Length = 733
Score = 30.3 bits (65), Expect = 5.8
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 344 NSKPGSQTSSPHRDLSEHKTLFPSAKNIDDDVSNKDIPNNAEVEKPERSASPPEKSSNIY 403
N + T S ++ S+ + L PS KN N AE++KP+ + S S
Sbjct: 136 NGSKDASTLSLEKEQSKLEKLKPSVKN-----------NGAEIKKPQLTKSNSSLSKQA- 183
Query: 404 LSDLSETKEVVRKKLRISNSVLPDRSKTETPSYTTKYSQF 443
L+ + + KEVV K + +++ S T S + +F
Sbjct: 184 LNSIIDKKEVVSSKTKPTSARSTPSSPTSVYSLPASFERF 223
>06_01_0397 +
2855273-2855347,2855515-2855606,2856317-2856347,
2856687-2856830,2856935-2857162,2857374-2857487,
2857749-2858249
Length = 394
Score = 30.3 bits (65), Expect = 5.8
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 8/76 (10%)
Query: 360 EHKTLFPSAKNIDDDVSNKDIPNNAEVEKPERSASPPEKSSNIYLSDLSETKEVVRKKLR 419
E+ + PSA + +S + N+ + K + S SPP++ + S + K V
Sbjct: 282 ENASTNPSALKLQGSISLSNNINDRKAPKKKSSPSPPDQKKPVAASPPDQKKPVALSP-- 339
Query: 420 ISNSVLPDRSKTETPS 435
PD KT TPS
Sbjct: 340 ------PDHKKTVTPS 349
>03_06_0399 -
33632811-33633107,33633236-33633385,33633705-33634029,
33635315-33635982,33636967-33637212,33637405-33637545,
33637807-33637856,33637943-33638060,33638304-33638910,
33639339-33639463,33639813-33639869,33639952-33640023,
33640100-33640232,33640305-33640428,33640522-33640576,
33640672-33641322
Length = 1272
Score = 30.3 bits (65), Expect = 5.8
Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 5/79 (6%)
Query: 356 RDLSEHKTLFPSAKNIDDDVSNKDIPNNAEVEKPERSASPPEKSSNIYLSDLSETKEVVR 415
+DL + + L S N++D + D PNNA E SPP S D+S E
Sbjct: 360 KDLDK-ELLENSQDNLEDKAQSSDNPNNAADE----IQSPPSSSPTESTDDISSEDEEYN 414
Query: 416 KKLRISNSVLPDRSKTETP 434
K I+ S D P
Sbjct: 415 DKENIAPSTPKDDVNVHEP 433
>11_03_0142 + 10675764-10675991,10676533-10676943
Length = 212
Score = 29.9 bits (64), Expect = 7.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 62 WSACYDEASGFTYYWNQQTNAVTWEAPPE 90
W C D SG YY N++T +W P E
Sbjct: 69 WEQCLDLHSGRMYYLNRKTMRKSWVRPME 97
>03_05_0734 - 27244802-27245536
Length = 244
Score = 29.9 bits (64), Expect = 7.6
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Query: 8 AGLIGNYDDSEEEGDDTSMQSVAVIPSGVKAPIKTQP-----SEAARSGIHRAPISHCPW 62
AG++ +YD EEG ++VA + ++ +P S SG R H P+
Sbjct: 122 AGVLASYDPDAEEGTAAVKRAVAALSVMFTQALRLEPIRETVSSGWESGEARVAAEHLPY 181
Query: 63 SACYDEASGFTYYWNQQTNAVTWEAP 88
+D S W + W+ P
Sbjct: 182 IEHWDTMSFEVLRWRRTGE---WDGP 204
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.308 0.127 0.369
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,992,333
Number of Sequences: 37544
Number of extensions: 665554
Number of successful extensions: 1483
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1471
Number of HSP's gapped (non-prelim): 25
length of query: 734
length of database: 14,793,348
effective HSP length: 87
effective length of query: 647
effective length of database: 11,527,020
effective search space: 7457981940
effective search space used: 7457981940
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 64 (29.9 bits)
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