Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001330-TA|BGIBMGA001330-PA|IPR001202|WW/Rsp5/WWP
(734 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC037404-1|AAH37404.1| 1015|Homo sapiens formin binding protein ... 45 0.001
AB023231-1|BAA76858.2| 1050|Homo sapiens KIAA1014 protein protein. 45 0.001
AK022987-1|BAB14348.1| 560|Homo sapiens protein ( Homo sapiens ... 44 0.002
BC113555-1|AAI13556.1| 833|Homo sapiens ventricular zone expres... 43 0.004
BC042159-1|AAH42159.1| 459|Homo sapiens VEPH1 protein protein. 43 0.004
AK027625-1|BAB55243.1| 833|Homo sapiens protein ( Homo sapiens ... 43 0.004
AB051479-1|BAB21783.1| 855|Homo sapiens KIAA1692 protein protein. 43 0.004
BC111017-1|AAI11018.1| 788|Homo sapiens VEPH1 protein protein. 42 0.010
BC101660-1|AAI01661.1| 833|Homo sapiens ventricular zone expres... 42 0.010
M36067-1|AAA59518.1| 919|Homo sapiens LIG1 protein. 38 0.17
BC110622-1|AAI10623.1| 801|Homo sapiens LIG1 protein protein. 38 0.17
BC108318-1|AAI08319.1| 919|Homo sapiens ligase I, DNA, ATP-depe... 38 0.17
AF527418-1|AAM77697.1| 919|Homo sapiens ligase I, DNA, ATP-depe... 38 0.17
BC067364-1|AAH67364.1| 871|Homo sapiens PRP40 pre-mRNA processi... 36 0.51
BC050398-1|AAH50398.1| 788|Homo sapiens PRPF40B protein protein. 36 0.51
AB002310-1|BAA20771.2| 3192|Homo sapiens KIAA0312 protein. 36 0.51
U70667-1|AAB93495.1| 349|Homo sapiens Fas-ligand associated fac... 36 0.68
BC029414-1|AAH29414.1| 414|Homo sapiens Unknown (protein for IM... 36 0.68
BC011788-1|AAH11788.1| 411|Homo sapiens PRPF40A protein protein. 36 0.68
AK024810-1|BAB15016.1| 323|Homo sapiens protein ( Homo sapiens ... 36 0.68
AF049528-1|AAC27506.1| 452|Homo sapiens huntingtin-interacting ... 36 0.68
AF049523-1|AAC27501.1| 423|Homo sapiens huntingtin-interacting ... 36 0.68
AB208791-1|BAD92028.1| 832|Homo sapiens DNA ligase I variant pr... 35 0.90
BC012358-1|AAH12358.1| 265|Homo sapiens polyglutamine binding p... 35 1.2
AJ973606-1|CAJ00549.1| 264|Homo sapiens polyglutamine binding p... 35 1.2
AJ973604-1|CAJ00551.1| 149|Homo sapiens polyglutamine binding p... 35 1.2
AJ973600-1|CAJ00544.1| 224|Homo sapiens polyglutamine binding p... 35 1.2
AJ973599-1|CAJ00543.1| 224|Homo sapiens polyglutamine binding p... 35 1.2
AJ973598-1|CAJ00542.1| 149|Homo sapiens polyglutamine binding p... 35 1.2
AJ973597-1|CAJ00541.1| 257|Homo sapiens polyglutamine binding p... 35 1.2
AJ973596-1|CAJ00540.1| 142|Homo sapiens polyglutamine binding p... 35 1.2
AJ973595-1|CAJ00539.1| 217|Homo sapiens polyglutamine binding p... 35 1.2
AJ973594-1|CAJ00538.1| 258|Homo sapiens polyglutamine binding p... 35 1.2
AJ973593-1|CAJ00537.1| 170|Homo sapiens polyglutamine binding p... 35 1.2
AJ242829-1|CAB44309.1| 265|Homo sapiens PQBP-1 protein protein. 35 1.2
AJ005893-1|CAA06750.1| 265|Homo sapiens JM26 protein. 35 1.2
AB041836-1|BAB16709.1| 170|Homo sapiens PQBP-1d protein. 35 1.2
AB041835-1|BAB16708.1| 224|Homo sapiens PQBP-1b/c protein. 35 1.2
AB041834-1|BAB16707.1| 224|Homo sapiens PQBP-1b/c protein. 35 1.2
AB041833-1|BAB16706.1| 128|Homo sapiens PQBP-1a protein. 35 1.2
AB041832-4|BAB16705.1| 128|Homo sapiens PQBP-1a protein. 35 1.2
AB041832-3|BAB16704.1| 224|Homo sapiens PQBP-1b/c protein. 35 1.2
AB041832-2|BAB16703.1| 170|Homo sapiens PQBP1-1d protein. 35 1.2
AB041832-1|BAB16702.1| 265|Homo sapiens PQBP-1 protein. 35 1.2
AB016533-1|BAA76400.1| 265|Homo sapiens nuclear protein contain... 35 1.2
AJ417593-1|CAD10391.2| 4169|Homo sapiens ALMS1 protein protein. 33 3.6
AC074008-1|AAY24208.1| 2557|Homo sapiens unknown protein. 33 3.6
BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongatio... 32 6.3
BC094719-1|AAH94719.1| 841|Homo sapiens ARHGAP12 protein protein. 32 6.3
BC013365-1|AAH13365.1| 704|Homo sapiens chromosome 20 open read... 32 6.3
BC010005-1|AAH10005.1| 704|Homo sapiens chromosome 20 open read... 32 6.3
AY033595-1|AAK52312.1| 846|Homo sapiens rho-GAP domain containi... 32 6.3
AY033594-1|AAK52311.1| 816|Homo sapiens rho-GAP domain containi... 32 6.3
AL390715-4|CAI12372.1| 846|Homo sapiens Rho GTPase activating p... 32 6.3
AL390715-3|CAI12371.1| 816|Homo sapiens Rho GTPase activating p... 32 6.3
AL162458-2|CAC10456.1| 704|Homo sapiens chromosome 20 open read... 32 6.3
AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription ... 32 6.3
AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongatio... 32 6.3
AB050014-1|BAC45238.1| 704|Homo sapiens posphorylated CTD inter... 32 6.3
BC108310-1|AAI08311.1| 376|Homo sapiens WW domain binding prote... 32 8.4
BC104879-1|AAI04880.1| 376|Homo sapiens WW domain-containing bi... 32 8.4
BC014442-1|AAH14442.1| 462|Homo sapiens integrator complex subu... 32 8.4
AL157877-5|CAI13223.1| 376|Homo sapiens WW domain binding prote... 32 8.4
AF242524-1|AAF99604.1| 444|Homo sapiens hypothetical nuclear fa... 32 8.4
AF071185-1|AAC34811.1| 376|Homo sapiens formin binding protein ... 32 8.4
AF049525-1|AAC27503.1| 144|Homo sapiens huntingtin-interacting ... 32 8.4
>BC037404-1|AAH37404.1| 1015|Homo sapiens formin binding protein 4
protein.
Length = 1015
Score = 44.8 bits (101), Expect = 0.001
Identities = 18/31 (58%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 62 WSACYDEASGFTYYWNQQTNAVTWEAPPEYL 92
W +DE +G YYWN QTN VTWE P+YL
Sbjct: 218 WQEVWDENTGCYYYWNTQTNEVTWEL-PQYL 247
Score = 44.0 bits (99), Expect = 0.002
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 549 YWRAWLQGAARALRTHE---APPGWTCDFLRAEGRYRYVRDSDGLVQWEYP 596
Y + LQ AA L+ +E P GW+C + R RY YV + G QWE+P
Sbjct: 575 YLKRKLQDAAEQLKQYEINATPKGWSCHWDRDHRRYFYVNEQSGESQWEFP 625
>AB023231-1|BAA76858.2| 1050|Homo sapiens KIAA1014 protein protein.
Length = 1050
Score = 44.8 bits (101), Expect = 0.001
Identities = 18/31 (58%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 62 WSACYDEASGFTYYWNQQTNAVTWEAPPEYL 92
W +DE +G YYWN QTN VTWE P+YL
Sbjct: 253 WQEVWDENTGCYYYWNTQTNEVTWEL-PQYL 282
Score = 44.0 bits (99), Expect = 0.002
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 549 YWRAWLQGAARALRTHE---APPGWTCDFLRAEGRYRYVRDSDGLVQWEYP 596
Y + LQ AA L+ +E P GW+C + R RY YV + G QWE+P
Sbjct: 610 YLKRKLQDAAEQLKQYEINATPKGWSCHWDRDHRRYFYVNEQSGESQWEFP 660
>AK022987-1|BAB14348.1| 560|Homo sapiens protein ( Homo sapiens
cDNA FLJ12925 fis, clone NT2RP2004710, highly similar to
Mus musculus formin binding protein 30 mRNA. ).
Length = 560
Score = 44.0 bits (99), Expect = 0.002
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 549 YWRAWLQGAARALRTHE---APPGWTCDFLRAEGRYRYVRDSDGLVQWEYP 596
Y + LQ AA L+ +E P GW+C + R RY YV + G QWE+P
Sbjct: 120 YLKRKLQDAAEQLKQYEINATPKGWSCHWDRDHRRYFYVNEQSGESQWEFP 170
>BC113555-1|AAI13556.1| 833|Homo sapiens ventricular zone expressed
PH domain homolog 1 (zebrafish) protein.
Length = 833
Score = 42.7 bits (96), Expect = 0.004
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 343 GNSKPGSQTSSPHRDLSEHKTLFPSAKNIDDDVSNKDIPNNAEVEKPERSASPPEKSSNI 402
GN K +T + L E +P+ +ID + ++ + N++ E PE +ASP E +
Sbjct: 488 GNDKLPFKTDTERSQLGESSVSYPNIIHIDSENLSETVKENSQEETPETTASPIEYQDKL 547
Query: 403 YLSDLSETKEVVRKKLRISNSV-LPDRSKTE 432
YL +V + I + +PD+ E
Sbjct: 548 YLHLKKNLSKVKAYAMEIGKKIPVPDQCTIE 578
>BC042159-1|AAH42159.1| 459|Homo sapiens VEPH1 protein protein.
Length = 459
Score = 42.7 bits (96), Expect = 0.004
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 343 GNSKPGSQTSSPHRDLSEHKTLFPSAKNIDDDVSNKDIPNNAEVEKPERSASPPEKSSNI 402
GN K +T + L E +P+ +ID + ++ + N++ E PE +ASP E +
Sbjct: 114 GNDKLPFKTDTERSQLGESSVSYPNIIHIDSENLSETVKENSQEETPETTASPIEYQDKL 173
Query: 403 YLSDLSETKEVVRKKLRISNSV-LPDRSKTE 432
YL +V + I + +PD+ E
Sbjct: 174 YLHLKKNLSKVKAYAMEIGKKIPVPDQCTIE 204
>AK027625-1|BAB55243.1| 833|Homo sapiens protein ( Homo sapiens
cDNA FLJ14719 fis, clone NT2RP3001457, weakly similar to
Drosophila melanogaster Melted (melt) mRNA. ).
Length = 833
Score = 42.7 bits (96), Expect = 0.004
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 343 GNSKPGSQTSSPHRDLSEHKTLFPSAKNIDDDVSNKDIPNNAEVEKPERSASPPEKSSNI 402
GN K +T + L E +P+ +ID + ++ + N++ E PE +ASP E +
Sbjct: 488 GNDKLPFKTDTERSQLGESSVSYPNIIHIDSENLSETVKENSQEETPETTASPIEYQDKL 547
Query: 403 YLSDLSETKEVVRKKLRISNSV-LPDRSKTE 432
YL +V + I + +PD+ E
Sbjct: 548 YLHLKKNLSKVKAYAMEIGKKIPVPDQCTIE 578
>AB051479-1|BAB21783.1| 855|Homo sapiens KIAA1692 protein protein.
Length = 855
Score = 42.7 bits (96), Expect = 0.004
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 343 GNSKPGSQTSSPHRDLSEHKTLFPSAKNIDDDVSNKDIPNNAEVEKPERSASPPEKSSNI 402
GN K +T + L E +P+ +ID + ++ + N++ E PE +ASP E +
Sbjct: 510 GNDKLPFKTDTERSQLGESSVSYPNIIHIDSENLSETVKENSQEETPETTASPIEYQDKL 569
Query: 403 YLSDLSETKEVVRKKLRISNSV-LPDRSKTE 432
YL +V + I + +PD+ E
Sbjct: 570 YLHLKKNLSKVKAYAMEIGKKIPVPDQCTIE 600
>BC111017-1|AAI11018.1| 788|Homo sapiens VEPH1 protein protein.
Length = 788
Score = 41.5 bits (93), Expect = 0.010
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 343 GNSKPGSQTSSPHRDLSEHKTLFPSAKNIDDDVSNKDIPNNAEVEKPERSASPPEKSSNI 402
GN K +T + L E +P+ +ID + + + N++ E PE +ASP E +
Sbjct: 488 GNDKLPFKTDTERSQLGESSVSYPNIIHIDSENLPETVKENSQEETPETTASPIEYQDKL 547
Query: 403 YLSDLSETKEVVRKKLRISNSV-LPDRSKTE 432
YL +V + I + +PD+ E
Sbjct: 548 YLHLKKNLSKVKAYAMEIGKKIPVPDQCTIE 578
>BC101660-1|AAI01661.1| 833|Homo sapiens ventricular zone expressed
PH domain homolog 1 protein.
Length = 833
Score = 41.5 bits (93), Expect = 0.010
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 343 GNSKPGSQTSSPHRDLSEHKTLFPSAKNIDDDVSNKDIPNNAEVEKPERSASPPEKSSNI 402
GN K +T + L E +P+ +ID + + + N++ E PE +ASP E +
Sbjct: 488 GNDKLPFKTDTERSQLGESSVSYPNIIHIDSENLPETVKENSQEETPETTASPIEYQDKL 547
Query: 403 YLSDLSETKEVVRKKLRISNSV-LPDRSKTE 432
YL +V + I + +PD+ E
Sbjct: 548 YLHLKKNLSKVKAYAMEIGKKIPVPDQCTIE 578
>M36067-1|AAA59518.1| 919|Homo sapiens LIG1 protein.
Length = 919
Score = 37.5 bits (83), Expect = 0.17
Identities = 23/116 (19%), Positives = 46/116 (39%), Gaps = 5/116 (4%)
Query: 304 EEAIDNTNPPNDSIDDLLSEIEKTELPKVXXXXXXXXXXGNSKPGSQTSSPHRDLSEHKT 363
+E ++ + D E E+ E PK + G Q ++P + L K
Sbjct: 134 QEVLEEQSEDEDREAKRKKEEEEEETPKESLTEAEVATEKEGEDGDQPTTPPKPLKTSKA 193
Query: 364 LFPSAKNIDDDVSNKDIPNNAEVEKPERSASPPEKSSNIYLSDLSETKEVVRKKLR 419
P+ + VS ++ E+++ E PP ++ S + K V+K+++
Sbjct: 194 ETPT-----ESVSEPEVATKQELQEEEEQTKPPRRAPKTLSSFFTPRKPAVKKEVK 244
>BC110622-1|AAI10623.1| 801|Homo sapiens LIG1 protein protein.
Length = 801
Score = 37.5 bits (83), Expect = 0.17
Identities = 23/116 (19%), Positives = 46/116 (39%), Gaps = 5/116 (4%)
Query: 304 EEAIDNTNPPNDSIDDLLSEIEKTELPKVXXXXXXXXXXGNSKPGSQTSSPHRDLSEHKT 363
+E ++ + D E E+ E PK + G Q ++P + L K
Sbjct: 134 QEVLEEQSEDEDREAKRKKEEEEEETPKESLTEAEVATEKEGEDGDQPTTPPKPLKTSKA 193
Query: 364 LFPSAKNIDDDVSNKDIPNNAEVEKPERSASPPEKSSNIYLSDLSETKEVVRKKLR 419
P+ + VS ++ E+++ E PP ++ S + K V+K+++
Sbjct: 194 ETPT-----ESVSEPEVATKQELQEEEEQTKPPRRAPKTLSSFFTPRKPAVKKEVK 244
>BC108318-1|AAI08319.1| 919|Homo sapiens ligase I, DNA,
ATP-dependent protein.
Length = 919
Score = 37.5 bits (83), Expect = 0.17
Identities = 23/116 (19%), Positives = 46/116 (39%), Gaps = 5/116 (4%)
Query: 304 EEAIDNTNPPNDSIDDLLSEIEKTELPKVXXXXXXXXXXGNSKPGSQTSSPHRDLSEHKT 363
+E ++ + D E E+ E PK + G Q ++P + L K
Sbjct: 134 QEVLEEQSEDEDREAKRKKEEEEEETPKESLTEAEVATEKEGEDGDQPTTPPKPLKTSKA 193
Query: 364 LFPSAKNIDDDVSNKDIPNNAEVEKPERSASPPEKSSNIYLSDLSETKEVVRKKLR 419
P+ + VS ++ E+++ E PP ++ S + K V+K+++
Sbjct: 194 ETPT-----ESVSEPEVATKQELQEEEEQTKPPRRAPKTLSSFFTPRKPAVKKEVK 244
>AF527418-1|AAM77697.1| 919|Homo sapiens ligase I, DNA,
ATP-dependent protein.
Length = 919
Score = 37.5 bits (83), Expect = 0.17
Identities = 23/116 (19%), Positives = 46/116 (39%), Gaps = 5/116 (4%)
Query: 304 EEAIDNTNPPNDSIDDLLSEIEKTELPKVXXXXXXXXXXGNSKPGSQTSSPHRDLSEHKT 363
+E ++ + D E E+ E PK + G Q ++P + L K
Sbjct: 134 QEVLEEQSEDEDREAKRKKEEEEEETPKESLTEAEVATEKEGEDGDQPTTPPKPLKTSKA 193
Query: 364 LFPSAKNIDDDVSNKDIPNNAEVEKPERSASPPEKSSNIYLSDLSETKEVVRKKLR 419
P+ + VS ++ E+++ E PP ++ S + K V+K+++
Sbjct: 194 ETPT-----ESVSEPEVATKQELQEEEEQTKPPRRAPKTLSSFFTPRKPAVKKEVK 244
>BC067364-1|AAH67364.1| 871|Homo sapiens PRP40 pre-mRNA processing
factor 40 homolog B (S. cerevisiae) protein.
Length = 871
Score = 35.9 bits (79), Expect = 0.51
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Query: 57 ISHCPWSACYDEASGFTYYWNQQTNAVTWEAPPEYLLALKIAQQQLNMGGSSQVSAAEWQ 116
+S CPW Y +G YY+N Q+ W P + L L++ +Q + + + Q
Sbjct: 134 LSQCPWKE-YKSDTGKPYYYNNQSKESRWTRPKD-LDDLEVLVKQ-------EAAGKQQQ 184
Query: 117 MYQQVLAEQQTKSQTQPPAI 136
Q L Q + Q PP +
Sbjct: 185 QLPQTLQPQPPQPQPDPPPV 204
>BC050398-1|AAH50398.1| 788|Homo sapiens PRPF40B protein protein.
Length = 788
Score = 35.9 bits (79), Expect = 0.51
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Query: 57 ISHCPWSACYDEASGFTYYWNQQTNAVTWEAPPEYLLALKIAQQQLNMGGSSQVSAAEWQ 116
+S CPW Y +G YY+N Q+ W P + L L++ +Q + + + Q
Sbjct: 134 LSQCPWKE-YKSDTGKPYYYNNQSKESRWTRPKD-LDDLEVLVKQ-------EAAGKQQQ 184
Query: 117 MYQQVLAEQQTKSQTQPPAI 136
Q L Q + Q PP +
Sbjct: 185 QLPQTLQPQPPQPQPDPPPV 204
>AB002310-1|BAA20771.2| 3192|Homo sapiens KIAA0312 protein.
Length = 3192
Score = 35.9 bits (79), Expect = 0.51
Identities = 32/151 (21%), Positives = 61/151 (40%), Gaps = 7/151 (4%)
Query: 289 GDIPPELQEIIEDKHEEAIDNTNPPNDSIDDLLSEIEKTELPKVXXXXXXXXXXGNSKPG 348
GD PP + E+ + + + + ++ PP DS SE T V +P
Sbjct: 1725 GDAPPAVAEV-QGRSDGSGESAQPPEDSSPPASSESSSTRDSAVAISGADSRGI-LEEPL 1782
Query: 349 SQTSSPHRD----LSEHKTLFPS-AKNIDDDVSNKDIPNNAEVEKPERSASPPEKSSNIY 403
TSS D +S + + PS + DD+ + + N + P R+A S+
Sbjct: 1783 PSTSSEEEDPLAGISLPEGVDPSFLAALPDDIRREVLQNQLGIRPPTRTAPSTNSSAPAV 1842
Query: 404 LSDLSETKEVVRKKLRISNSVLPDRSKTETP 434
+ + T+ + +++ L + ++TP
Sbjct: 1843 VGNPGVTEVLAQQRAEQQRRELAQNASSDTP 1873
>U70667-1|AAB93495.1| 349|Homo sapiens Fas-ligand associated factor
1 protein.
Length = 349
Score = 35.5 bits (78), Expect = 0.68
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 57 ISHCPWSACYDEASGFTYYWNQQTNAVTWEAPPE 90
+S CPW Y SG YY+N QT W P E
Sbjct: 175 LSKCPWKE-YKSDSGKPYYYNSQTKESRWAKPKE 207
>BC029414-1|AAH29414.1| 414|Homo sapiens Unknown (protein for
IMAGE:4733897) protein.
Length = 414
Score = 35.5 bits (78), Expect = 0.68
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 57 ISHCPWSACYDEASGFTYYWNQQTNAVTWEAPPE 90
+S CPW Y SG YY+N QT W P E
Sbjct: 140 LSKCPWKE-YKSDSGKPYYYNSQTKESRWAKPKE 172
>BC011788-1|AAH11788.1| 411|Homo sapiens PRPF40A protein protein.
Length = 411
Score = 35.5 bits (78), Expect = 0.68
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 57 ISHCPWSACYDEASGFTYYWNQQTNAVTWEAPPE 90
+S CPW Y SG YY+N QT W P E
Sbjct: 140 LSKCPWKE-YKSDSGKPYYYNSQTKESRWAKPKE 172
>AK024810-1|BAB15016.1| 323|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21157 fis, clone CAS09937. ).
Length = 323
Score = 35.5 bits (78), Expect = 0.68
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 57 ISHCPWSACYDEASGFTYYWNQQTNAVTWEAPPE 90
+S CPW Y SG YY+N QT W P E
Sbjct: 51 LSKCPWKE-YKSDSGKPYYYNSQTKESRWAKPKE 83
>AF049528-1|AAC27506.1| 452|Homo sapiens huntingtin-interacting
protein HYPA/FBP11 protein.
Length = 452
Score = 35.5 bits (78), Expect = 0.68
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 57 ISHCPWSACYDEASGFTYYWNQQTNAVTWEAPPE 90
+S CPW Y SG YY+N QT W P E
Sbjct: 186 LSKCPWKE-YKSDSGKPYYYNSQTKESRWAKPKE 218
>AF049523-1|AAC27501.1| 423|Homo sapiens huntingtin-interacting
protein HYPA/FBP11 protein.
Length = 423
Score = 35.5 bits (78), Expect = 0.68
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 57 ISHCPWSACYDEASGFTYYWNQQTNAVTWEAPPE 90
+S CPW Y SG YY+N QT W P E
Sbjct: 157 LSKCPWKE-YKSDSGKPYYYNSQTKESRWAKPKE 189
>AB208791-1|BAD92028.1| 832|Homo sapiens DNA ligase I variant
protein.
Length = 832
Score = 35.1 bits (77), Expect = 0.90
Identities = 20/95 (21%), Positives = 39/95 (41%), Gaps = 5/95 (5%)
Query: 325 EKTELPKVXXXXXXXXXXGNSKPGSQTSSPHRDLSEHKTLFPSAKNIDDDVSNKDIPNNA 384
E+ E PK + G Q ++P + L K P+ + VS ++
Sbjct: 186 EEEETPKESLTEAEVATEKEGEDGDQPTTPPKPLKTSKAETPT-----ESVSEPEVATKQ 240
Query: 385 EVEKPERSASPPEKSSNIYLSDLSETKEVVRKKLR 419
E+++ E PP ++ S + K V+K+++
Sbjct: 241 ELQEEEEQTKPPRRAPKTLSSFFTPRKPAVKKEVK 275
>BC012358-1|AAH12358.1| 265|Homo sapiens polyglutamine binding
protein 1 protein.
Length = 265
Score = 34.7 bits (76), Expect = 1.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 62 WSACYDEASGFTYYWNQQTNAVTWEAP 88
W +D + G YYWN T+ V+W +P
Sbjct: 52 WYKVFDPSCGLPYYWNADTDLVSWLSP 78
>AJ973606-1|CAJ00549.1| 264|Homo sapiens polyglutamine binding
protein variant 14 protein.
Length = 264
Score = 34.7 bits (76), Expect = 1.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 62 WSACYDEASGFTYYWNQQTNAVTWEAP 88
W +D + G YYWN T+ V+W +P
Sbjct: 52 WYKVFDPSCGLPYYWNADTDLVSWLSP 78
>AJ973604-1|CAJ00551.1| 149|Homo sapiens polyglutamine binding
protein variant 12 protein.
Length = 149
Score = 34.7 bits (76), Expect = 1.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 62 WSACYDEASGFTYYWNQQTNAVTWEAP 88
W +D + G YYWN T+ V+W +P
Sbjct: 56 WYKVFDPSCGLPYYWNADTDLVSWLSP 82
>AJ973600-1|CAJ00544.1| 224|Homo sapiens polyglutamine binding
protein variant 8 protein.
Length = 224
Score = 34.7 bits (76), Expect = 1.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 62 WSACYDEASGFTYYWNQQTNAVTWEAP 88
W +D + G YYWN T+ V+W +P
Sbjct: 52 WYKVFDPSCGLPYYWNADTDLVSWLSP 78
>AJ973599-1|CAJ00543.1| 224|Homo sapiens polyglutamine binding
protein variant 7 protein.
Length = 224
Score = 34.7 bits (76), Expect = 1.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 62 WSACYDEASGFTYYWNQQTNAVTWEAP 88
W +D + G YYWN T+ V+W +P
Sbjct: 52 WYKVFDPSCGLPYYWNADTDLVSWLSP 78
>AJ973598-1|CAJ00542.1| 149|Homo sapiens polyglutamine binding
protein variant 6 protein.
Length = 149
Score = 34.7 bits (76), Expect = 1.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 62 WSACYDEASGFTYYWNQQTNAVTWEAP 88
W +D + G YYWN T+ V+W +P
Sbjct: 52 WYKVFDPSCGLPYYWNADTDLVSWLSP 78
>AJ973597-1|CAJ00541.1| 257|Homo sapiens polyglutamine binding
protein variant 5 protein.
Length = 257
Score = 34.7 bits (76), Expect = 1.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 62 WSACYDEASGFTYYWNQQTNAVTWEAP 88
W +D + G YYWN T+ V+W +P
Sbjct: 52 WYKVFDPSCGLPYYWNADTDLVSWLSP 78
>AJ973596-1|CAJ00540.1| 142|Homo sapiens polyglutamine binding
protein variant 4 protein.
Length = 142
Score = 34.7 bits (76), Expect = 1.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 62 WSACYDEASGFTYYWNQQTNAVTWEAP 88
W +D + G YYWN T+ V+W +P
Sbjct: 52 WYKVFDPSCGLPYYWNADTDLVSWLSP 78
>AJ973595-1|CAJ00539.1| 217|Homo sapiens polyglutamine binding
protein variant 3 protein.
Length = 217
Score = 34.7 bits (76), Expect = 1.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 62 WSACYDEASGFTYYWNQQTNAVTWEAP 88
W +D + G YYWN T+ V+W +P
Sbjct: 52 WYKVFDPSCGLPYYWNADTDLVSWLSP 78
>AJ973594-1|CAJ00538.1| 258|Homo sapiens polyglutamine binding
protein variant 2 protein.
Length = 258
Score = 34.7 bits (76), Expect = 1.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 62 WSACYDEASGFTYYWNQQTNAVTWEAP 88
W +D + G YYWN T+ V+W +P
Sbjct: 52 WYKVFDPSCGLPYYWNADTDLVSWLSP 78
>AJ973593-1|CAJ00537.1| 170|Homo sapiens polyglutamine binding
protein variant 1 protein.
Length = 170
Score = 34.7 bits (76), Expect = 1.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 62 WSACYDEASGFTYYWNQQTNAVTWEAP 88
W +D + G YYWN T+ V+W +P
Sbjct: 52 WYKVFDPSCGLPYYWNADTDLVSWLSP 78
>AJ242829-1|CAB44309.1| 265|Homo sapiens PQBP-1 protein protein.
Length = 265
Score = 34.7 bits (76), Expect = 1.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 62 WSACYDEASGFTYYWNQQTNAVTWEAP 88
W +D + G YYWN T+ V+W +P
Sbjct: 52 WYKVFDPSCGLPYYWNADTDLVSWLSP 78
>AJ005893-1|CAA06750.1| 265|Homo sapiens JM26 protein.
Length = 265
Score = 34.7 bits (76), Expect = 1.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 62 WSACYDEASGFTYYWNQQTNAVTWEAP 88
W +D + G YYWN T+ V+W +P
Sbjct: 52 WYKVFDPSCGLPYYWNADTDLVSWLSP 78
>AB041836-1|BAB16709.1| 170|Homo sapiens PQBP-1d protein.
Length = 170
Score = 34.7 bits (76), Expect = 1.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 62 WSACYDEASGFTYYWNQQTNAVTWEAP 88
W +D + G YYWN T+ V+W +P
Sbjct: 52 WYKVFDPSCGLPYYWNADTDLVSWLSP 78
>AB041835-1|BAB16708.1| 224|Homo sapiens PQBP-1b/c protein.
Length = 224
Score = 34.7 bits (76), Expect = 1.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 62 WSACYDEASGFTYYWNQQTNAVTWEAP 88
W +D + G YYWN T+ V+W +P
Sbjct: 52 WYKVFDPSCGLPYYWNADTDLVSWLSP 78
>AB041834-1|BAB16707.1| 224|Homo sapiens PQBP-1b/c protein.
Length = 224
Score = 34.7 bits (76), Expect = 1.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 62 WSACYDEASGFTYYWNQQTNAVTWEAP 88
W +D + G YYWN T+ V+W +P
Sbjct: 52 WYKVFDPSCGLPYYWNADTDLVSWLSP 78
>AB041833-1|BAB16706.1| 128|Homo sapiens PQBP-1a protein.
Length = 128
Score = 34.7 bits (76), Expect = 1.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 62 WSACYDEASGFTYYWNQQTNAVTWEAP 88
W +D + G YYWN T+ V+W +P
Sbjct: 52 WYKVFDPSCGLPYYWNADTDLVSWLSP 78
>AB041832-4|BAB16705.1| 128|Homo sapiens PQBP-1a protein.
Length = 128
Score = 34.7 bits (76), Expect = 1.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 62 WSACYDEASGFTYYWNQQTNAVTWEAP 88
W +D + G YYWN T+ V+W +P
Sbjct: 52 WYKVFDPSCGLPYYWNADTDLVSWLSP 78
>AB041832-3|BAB16704.1| 224|Homo sapiens PQBP-1b/c protein.
Length = 224
Score = 34.7 bits (76), Expect = 1.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 62 WSACYDEASGFTYYWNQQTNAVTWEAP 88
W +D + G YYWN T+ V+W +P
Sbjct: 52 WYKVFDPSCGLPYYWNADTDLVSWLSP 78
>AB041832-2|BAB16703.1| 170|Homo sapiens PQBP1-1d protein.
Length = 170
Score = 34.7 bits (76), Expect = 1.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 62 WSACYDEASGFTYYWNQQTNAVTWEAP 88
W +D + G YYWN T+ V+W +P
Sbjct: 52 WYKVFDPSCGLPYYWNADTDLVSWLSP 78
>AB041832-1|BAB16702.1| 265|Homo sapiens PQBP-1 protein.
Length = 265
Score = 34.7 bits (76), Expect = 1.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 62 WSACYDEASGFTYYWNQQTNAVTWEAP 88
W +D + G YYWN T+ V+W +P
Sbjct: 52 WYKVFDPSCGLPYYWNADTDLVSWLSP 78
>AB016533-1|BAA76400.1| 265|Homo sapiens nuclear protein
containing a WW domain (Npw38) protein.
Length = 265
Score = 34.7 bits (76), Expect = 1.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 62 WSACYDEASGFTYYWNQQTNAVTWEAP 88
W +D + G YYWN T+ V+W +P
Sbjct: 52 WYKVFDPSCGLPYYWNADTDLVSWLSP 78
>AJ417593-1|CAD10391.2| 4169|Homo sapiens ALMS1 protein protein.
Length = 4169
Score = 33.1 bits (72), Expect = 3.6
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 375 VSNKDIPNN---AEVEKPERSASPPEKSSNIYLSDLSETKEVVRKKLRISNSVLPDRSKT 431
+S +++P++ E K + P E+ + I + S ++KL+IS +PD KT
Sbjct: 1951 ISQQELPDSHLTEEALKVSPVSIPAEQKTGIPIGLSSSYSHSHKEKLKISTVHIPDDQKT 2010
Query: 432 ETPSYT-TKYSQ 442
E P+ T + YSQ
Sbjct: 2011 EFPAATLSSYSQ 2022
>AC074008-1|AAY24208.1| 2557|Homo sapiens unknown protein.
Length = 2557
Score = 33.1 bits (72), Expect = 3.6
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 375 VSNKDIPNN---AEVEKPERSASPPEKSSNIYLSDLSETKEVVRKKLRISNSVLPDRSKT 431
+S +++P++ E K + P E+ + I + S ++KL+IS +PD KT
Sbjct: 1949 ISQQELPDSHLTEEALKVSPVSIPAEQKTGIPIGLSSSYSHSHKEKLKISTVHIPDDQKT 2008
Query: 432 ETPSYT-TKYSQ 442
E P+ T + YSQ
Sbjct: 2009 EFPAATLSSYSQ 2020
>BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongation
regulator 1 protein.
Length = 1077
Score = 32.3 bits (70), Expect = 6.3
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 66 YDEASGFTYYWNQQTNAVTWEAPPE 90
Y A G TYY+N +T TWE P E
Sbjct: 417 YKTADGKTYYYNNRTLESTWEKPQE 441
>BC094719-1|AAH94719.1| 841|Homo sapiens ARHGAP12 protein protein.
Length = 841
Score = 32.3 bits (70), Expect = 6.3
Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 66 YDEASGFTYYWNQQTNAVTWEAPPEYLLALKIAQQQLNMGGSSQVSAAEWQMYQQVLAEQ 125
+ ++SG YY+N+ T TW+ PP + I++ G ++ ++E Y ++
Sbjct: 274 HKDSSGRCYYYNRGTQERTWK-PPRWTRDASISKGDFQNPGDQELLSSEENYYSTSYSQS 332
Query: 126 QTKSQTQP 133
++ + P
Sbjct: 333 DSQCGSPP 340
>BC013365-1|AAH13365.1| 704|Homo sapiens chromosome 20 open
reading frame 67 protein.
Length = 704
Score = 32.3 bits (70), Expect = 6.3
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 59 HCPWSACYDEASGFTYYWNQQTNAVTWEAP 88
H W C+ YY+N+ TN WE P
Sbjct: 46 HAGWEKCWSRRENRPYYFNRFTNQSLWEMP 75
>BC010005-1|AAH10005.1| 704|Homo sapiens chromosome 20 open
reading frame 67 protein.
Length = 704
Score = 32.3 bits (70), Expect = 6.3
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 59 HCPWSACYDEASGFTYYWNQQTNAVTWEAP 88
H W C+ YY+N+ TN WE P
Sbjct: 46 HAGWEKCWSRRENRPYYFNRFTNQSLWEMP 75
>AY033595-1|AAK52312.1| 846|Homo sapiens rho-GAP domain containing
protein ARHGAP12b protein.
Length = 846
Score = 32.3 bits (70), Expect = 6.3
Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 66 YDEASGFTYYWNQQTNAVTWEAPPEYLLALKIAQQQLNMGGSSQVSAAEWQMYQQVLAEQ 125
+ ++SG YY+N+ T TW+ PP + I++ G ++ ++E Y ++
Sbjct: 274 HKDSSGRCYYYNRGTQERTWK-PPRWTRDASISKGDFQNPGDQELLSSEENYYSTSYSQS 332
Query: 126 QTKSQTQP 133
++ + P
Sbjct: 333 DSQCGSPP 340
>AY033594-1|AAK52311.1| 816|Homo sapiens rho-GAP domain containing
protein ARHGAP12a protein.
Length = 816
Score = 32.3 bits (70), Expect = 6.3
Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 66 YDEASGFTYYWNQQTNAVTWEAPPEYLLALKIAQQQLNMGGSSQVSAAEWQMYQQVLAEQ 125
+ ++SG YY+N+ T TW+ PP + I++ G ++ ++E Y ++
Sbjct: 274 HKDSSGRCYYYNRGTQERTWK-PPRWTRDASISKGDFQNPGDQELLSSEENYYSTSYSQS 332
Query: 126 QTKSQTQP 133
++ + P
Sbjct: 333 DSQCGSPP 340
>AL390715-4|CAI12372.1| 846|Homo sapiens Rho GTPase activating
protein 12 protein.
Length = 846
Score = 32.3 bits (70), Expect = 6.3
Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 66 YDEASGFTYYWNQQTNAVTWEAPPEYLLALKIAQQQLNMGGSSQVSAAEWQMYQQVLAEQ 125
+ ++SG YY+N+ T TW+ PP + I++ G ++ ++E Y ++
Sbjct: 274 HKDSSGRCYYYNRGTQERTWK-PPRWTRDASISKGDFQNPGDQELLSSEENYYSTSYSQS 332
Query: 126 QTKSQTQP 133
++ + P
Sbjct: 333 DSQCGSPP 340
>AL390715-3|CAI12371.1| 816|Homo sapiens Rho GTPase activating
protein 12 protein.
Length = 816
Score = 32.3 bits (70), Expect = 6.3
Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 66 YDEASGFTYYWNQQTNAVTWEAPPEYLLALKIAQQQLNMGGSSQVSAAEWQMYQQVLAEQ 125
+ ++SG YY+N+ T TW+ PP + I++ G ++ ++E Y ++
Sbjct: 274 HKDSSGRCYYYNRGTQERTWK-PPRWTRDASISKGDFQNPGDQELLSSEENYYSTSYSQS 332
Query: 126 QTKSQTQP 133
++ + P
Sbjct: 333 DSQCGSPP 340
>AL162458-2|CAC10456.1| 704|Homo sapiens chromosome 20 open
reading frame 67 protein.
Length = 704
Score = 32.3 bits (70), Expect = 6.3
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 59 HCPWSACYDEASGFTYYWNQQTNAVTWEAP 88
H W C+ YY+N+ TN WE P
Sbjct: 46 HAGWEKCWSRRENRPYYFNRFTNQSLWEMP 75
>AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription
factor CA150 protein.
Length = 1098
Score = 32.3 bits (70), Expect = 6.3
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 66 YDEASGFTYYWNQQTNAVTWEAPPE 90
Y A G TYY+N +T TWE P E
Sbjct: 438 YKTADGKTYYYNNRTLESTWEKPQE 462
>AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongation
regulator 1 variant protein.
Length = 1081
Score = 32.3 bits (70), Expect = 6.3
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 66 YDEASGFTYYWNQQTNAVTWEAPPE 90
Y A G TYY+N +T TWE P E
Sbjct: 421 YKTADGKTYYYNNRTLESTWEKPQE 445
>AB050014-1|BAC45238.1| 704|Homo sapiens posphorylated CTD
interacting factor PCIF1 protein.
Length = 704
Score = 32.3 bits (70), Expect = 6.3
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 59 HCPWSACYDEASGFTYYWNQQTNAVTWEAP 88
H W C+ YY+N+ TN WE P
Sbjct: 46 HAGWEKCWSRRENRPYYFNRFTNQSLWEMP 75
>BC108310-1|AAI08311.1| 376|Homo sapiens WW domain binding protein
4 (formin binding protein 21) protein.
Length = 376
Score = 31.9 bits (69), Expect = 8.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 71 GFTYYWNQQTNAVTWEAPPEYL 92
GFTYY+N +T WE P +++
Sbjct: 177 GFTYYYNTETGESRWEKPDDFI 198
>BC104879-1|AAI04880.1| 376|Homo sapiens WW domain-containing
binding protein 4 protein.
Length = 376
Score = 31.9 bits (69), Expect = 8.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 71 GFTYYWNQQTNAVTWEAPPEYL 92
GFTYY+N +T WE P +++
Sbjct: 177 GFTYYYNTETGESRWEKPDDFI 198
>BC014442-1|AAH14442.1| 462|Homo sapiens integrator complex subunit
12 protein.
Length = 462
Score = 31.9 bits (69), Expect = 8.4
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 366 PSAKNIDDDVSNKDIPNNAEVEKPERSASP--PEKSSNIYLSDLSETKE 412
P+ K D DIP +EKPE +SP + S ++ ++DLS +E
Sbjct: 100 PADKMKSDITEGVDIPKKPRLEKPETQSSPITVQSSKDLPMADLSSFEE 148
>AL157877-5|CAI13223.1| 376|Homo sapiens WW domain binding protein
4 (formin binding protein 21) protein.
Length = 376
Score = 31.9 bits (69), Expect = 8.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 71 GFTYYWNQQTNAVTWEAPPEYL 92
GFTYY+N +T WE P +++
Sbjct: 177 GFTYYYNTETGESRWEKPDDFI 198
>AF242524-1|AAF99604.1| 444|Homo sapiens hypothetical nuclear
factor SBBI22 protein.
Length = 444
Score = 31.9 bits (69), Expect = 8.4
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 366 PSAKNIDDDVSNKDIPNNAEVEKPERSASP--PEKSSNIYLSDLSETKE 412
P+ K D DIP +EKPE +SP + S ++ ++DLS +E
Sbjct: 100 PADKMKSDITEGVDIPKKPRLEKPETQSSPITVQSSKDLPMADLSSFEE 148
>AF071185-1|AAC34811.1| 376|Homo sapiens formin binding protein 21
protein.
Length = 376
Score = 31.9 bits (69), Expect = 8.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 71 GFTYYWNQQTNAVTWEAPPEYL 92
GFTYY+N +T WE P +++
Sbjct: 177 GFTYYYNTETGESRWEKPDDFI 198
>AF049525-1|AAC27503.1| 144|Homo sapiens huntingtin-interacting
protein HYPC protein.
Length = 144
Score = 31.9 bits (69), Expect = 8.4
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 57 ISHCPWSACYDEASGFTYYWNQQTNAVTWEAPPE 90
+S CPW Y +G YY+N Q+ W P +
Sbjct: 99 LSQCPWKE-YKSDTGKPYYYNNQSKESRWTRPKD 131
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.308 0.127 0.369
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,769,147
Number of Sequences: 224733
Number of extensions: 3322264
Number of successful extensions: 10847
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 10771
Number of HSP's gapped (non-prelim): 97
length of query: 734
length of database: 73,234,838
effective HSP length: 95
effective length of query: 639
effective length of database: 51,885,203
effective search space: 33154644717
effective search space used: 33154644717
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 69 (31.9 bits)
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