GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001329-TA|BGIBMGA001329-PA|undefined
         (70 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X63361-1|CAA44963.1|  576|Drosophila melanogaster protein kinase...    26   7.4  
AY095028-1|AAM11356.1|  576|Drosophila melanogaster LD11851p pro...    26   7.4  
AE014296-3322|AAX52738.1|  576|Drosophila melanogaster CG12306-P...    26   7.4  
AE014296-3321|AAF49036.1|  576|Drosophila melanogaster CG12306-P...    26   7.4  

>X63361-1|CAA44963.1|  576|Drosophila melanogaster protein kinase
           protein.
          Length = 576

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 9/25 (36%), Positives = 12/25 (48%)

Query: 25  DEEISVIKKNKLWVRKWIDRRDKLG 49
           DE      +   W+ KW+D  DK G
Sbjct: 379 DENTDPAAQPLFWISKWVDYSDKYG 403


>AY095028-1|AAM11356.1|  576|Drosophila melanogaster LD11851p
           protein.
          Length = 576

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 9/25 (36%), Positives = 12/25 (48%)

Query: 25  DEEISVIKKNKLWVRKWIDRRDKLG 49
           DE      +   W+ KW+D  DK G
Sbjct: 379 DENTDPAAQPLFWISKWVDYSDKYG 403


>AE014296-3322|AAX52738.1|  576|Drosophila melanogaster CG12306-PB,
           isoform B protein.
          Length = 576

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 9/25 (36%), Positives = 12/25 (48%)

Query: 25  DEEISVIKKNKLWVRKWIDRRDKLG 49
           DE      +   W+ KW+D  DK G
Sbjct: 379 DENTDPAAQPLFWISKWVDYSDKYG 403


>AE014296-3321|AAF49036.1|  576|Drosophila melanogaster CG12306-PA,
           isoform A protein.
          Length = 576

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 9/25 (36%), Positives = 12/25 (48%)

Query: 25  DEEISVIKKNKLWVRKWIDRRDKLG 49
           DE      +   W+ KW+D  DK G
Sbjct: 379 DENTDPAAQPLFWISKWVDYSDKYG 403


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.320    0.136    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,460,781
Number of Sequences: 52641
Number of extensions: 66814
Number of successful extensions: 173
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 169
Number of HSP's gapped (non-prelim): 4
length of query: 70
length of database: 24,830,863
effective HSP length: 50
effective length of query: 20
effective length of database: 22,198,813
effective search space: 443976260
effective search space used: 443976260
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)