Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001328-TA|BGIBMGA001328-PA|IPR002557|Chitin binding
Peritrophin-A
         (456 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    25   1.3  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    23   4.0  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   9.3  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 195 QSSVYQFIKRFDPNSPDSIKTAITQSEIIDLNKH 228
           Q SVY  ++  +P +   I+    QS  +DLN H
Sbjct: 66  QPSVYPLLRFENPETHHPIRHGRRQSRSMDLNAH 99


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 23.4 bits (48), Expect = 4.0
 Identities = 11/22 (50%), Positives = 14/22 (63%)

Query: 56  SDEEMSQRTPRPDILSVPLTSK 77
           SDEE +  +  P I SVP TS+
Sbjct: 81  SDEEYAANSQPPRITSVPNTSR 102


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 9.3
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 65  PRPDILSVPLTSKYYDGLKEAESKFLLHP 93
           P   +L VPL+   YD  ++ E K+   P
Sbjct: 248 PNELVLEVPLSHPTYDWFEKLELKWFAVP 276


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.312    0.132    0.396 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,393
Number of Sequences: 429
Number of extensions: 7785
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 3
length of query: 456
length of database: 140,377
effective HSP length: 60
effective length of query: 396
effective length of database: 114,637
effective search space: 45396252
effective search space used: 45396252
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 45 (22.2 bits)