BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001328-TA|BGIBMGA001328-PA|IPR002557|Chitin binding Peritrophin-A (456 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At4g34830.1 68417.m04942 pentatricopeptide (PPR) repeat-containi... 34 0.17 At4g00650.1 68417.m00089 FRIGIDA protein identical to Swiss-Prot... 34 0.23 At1g63530.1 68414.m07182 hypothetical protein 33 0.30 At4g24860.1 68417.m03559 AAA-type ATPase family protein contains... 33 0.39 At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 33 0.52 At4g02480.1 68417.m00335 AAA-type ATPase family protein contains... 32 0.69 At1g16500.1 68414.m01973 expressed protein 31 1.6 At5g28235.1 68418.m03421 Ulp1 protease family protein contains P... 31 2.1 At1g62130.1 68414.m07010 AAA-type ATPase family protein contains... 31 2.1 At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 30 3.7 At1g10620.1 68414.m01204 protein kinase family protein contains ... 30 3.7 At1g02990.2 68414.m00269 expressed protein similar to mature-par... 30 3.7 At1g02990.1 68414.m00270 expressed protein similar to mature-par... 30 3.7 At1g09230.1 68414.m01030 RNA recognition motif (RRM)-containing ... 29 4.9 At3g23510.1 68416.m02960 cyclopropane fatty acid synthase, putat... 29 6.4 At3g21270.1 68416.m02688 Dof-type zinc finger domain-containing ... 29 6.4 At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein ... 29 6.4 At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 29 6.4 At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99... 29 8.5 At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99... 29 8.5 At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99... 29 8.5 At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99... 29 8.5 At3g47610.1 68416.m05183 expressed protein 29 8.5 >At4g34830.1 68417.m04942 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat Length = 749 Score = 34.3 bits (75), Expect = 0.17 Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 5/123 (4%) Query: 335 VPAFGLLPPKEGNITNSTALPTKSPKTGKSPF---STARRT-TIKAEDATPKPRNVEYNI 390 +P+ + P + TNS L K+ + F S+ + T ++ E+ +I Sbjct: 299 LPSLKAVSPAVTSATNSLFLDHKNNGVIDTQFPGQSSGQATGDVQEENLVAHSNGGVSHI 358 Query: 391 SSYYVPDYVFPLDGPHPGYESDDAQTSFQVQVSRPGRSSYGENPKCPQCHPAYLKPGSCE 450 D+ FP DG H G++ D++ F + + +S G +P+ + L+ G + Sbjct: 359 RKDVKGDWKFPSDGKHVGHQIDESMPQFPAR-NFELHNSNGRSPETSDAYNRLLRDGRIK 417 Query: 451 PCI 453 CI Sbjct: 418 DCI 420 >At4g00650.1 68417.m00089 FRIGIDA protein identical to Swiss-Prot:Q9FDW0 FRIGIDA protein [Arabidopsis thaliana] Length = 318 Score = 33.9 bits (74), Expect = 0.23 Identities = 21/103 (20%), Positives = 39/103 (37%) Query: 152 PTIRPQPESRDTSLKNKGNQPERELMPPLLPSXXXXXXXXXXXQSSVYQFIKRFDPNSPD 211 PT+ QP + L + +R P + QS QF+K D + Sbjct: 6 PTVAAQPTTTANPLLQRHQSEQRRRELPKIVETESTSMDITIGQSKQPQFLKSIDELAAF 65 Query: 212 SIKTAITQSEIIDLNKHLPEGQVSSEGQVSSEDERTPKKNKSF 254 S+ + + DL KH+ + + + ++ S +N +F Sbjct: 66 SVAVETFKRQFDDLQKHIESIENAIDSKLESNGVVLAARNNNF 108 >At1g63530.1 68414.m07182 hypothetical protein Length = 499 Score = 33.5 bits (73), Expect = 0.30 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 5/91 (5%) Query: 300 PKPEQVLLPPKKDYSQSPLDSTTMGPPIYYEWKWAVPAFGLLPPKEGNITNSTALPTKSP 359 P P L P ++ S +T G + EW WA P + P + + ST + +P Sbjct: 106 PPPSSSLSGPAQNVPWSISAYSTAGRGV--EWAWARPDVAVYPASSSSSSTSTVVFGTTP 163 Query: 360 KTGKSPFSTAR---RTTIKAEDATPKPRNVE 387 + S F ++ +TT +TP P E Sbjct: 164 VSVSSLFGPSQDFPKTTFACCSSTPAPTRCE 194 >At4g24860.1 68417.m03559 AAA-type ATPase family protein contains Pfam profile PF00004: ATPase, AAA family Length = 1122 Score = 33.1 bits (72), Expect = 0.39 Identities = 21/62 (33%), Positives = 33/62 (53%) Query: 45 LLIGQRDKPFVSDEEMSQRTPRPDILSVPLTSKYYDGLKEAESKFLLHPDNDIVGVADTI 104 L++ ++PF DE + +R PR ++ +P TS LK +K L PD DI +A Sbjct: 962 LVLAATNRPFDLDEAVIRRLPRRLMVGLPDTSNRAFILKVILAKEDLSPDLDIGEIASMT 1021 Query: 105 SG 106 +G Sbjct: 1022 NG 1023 >At5g14920.1 68418.m01750 gibberellin-regulated family protein similar to SP|P46689 Gibberellin-regulated protein 1 precursor {Arabidopsis thaliana}; contains Pfam profile PF02704: Gibberellin regulated protein Length = 275 Score = 32.7 bits (71), Expect = 0.52 Identities = 26/104 (25%), Positives = 36/104 (34%), Gaps = 1/104 (0%) Query: 302 PEQVLLPPKKDYSQSPLDSTTMGPPIYYEWKWAVPAFGLLPPKEGNITNSTALPTKSPKT 361 P L PP Y L +T + PP P + P K T LP P T Sbjct: 48 PSPALKPPTPSYKPPTLPTTPIKPPTTKP-PVKPPTIPVTPVKPPVSTPPIKLPPVQPPT 106 Query: 362 GKSPFSTARRTTIKAEDATPKPRNVEYNISSYYVPDYVFPLDGP 405 K P T + +++ P V+ +S P P+ P Sbjct: 107 YKPPTPTVKPPSVQPPTYKPPTPTVKPPTTSPVKPPTTPPVQSP 150 >At4g02480.1 68417.m00335 AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family; similar to Spastin (Swiss-Prot:Q9UBP0) [Homo sapiens] and Spastin (Fragment) (Swiss-Prot:Q9QYY8) [Mus musculus]; similar to mitochondrial sorting protein 1 (MSP1) protein (TAT-binding homolog 4) (Swiss-Prot:P28737) [Saccharomyces cerevisiae] Length = 1265 Score = 32.3 bits (70), Expect = 0.69 Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 1/78 (1%) Query: 30 YMVNCS-MAERDYDANLLIGQRDKPFVSDEEMSQRTPRPDILSVPLTSKYYDGLKEAESK 88 +MVN + +D + L++ ++PF DE + +R PR ++++P + L +K Sbjct: 1089 FMVNWDGLRTKDRERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDATNRSKILSVILAK 1148 Query: 89 FLLHPDNDIVGVADTISG 106 + PD D+ +A+ G Sbjct: 1149 EEIAPDVDLEAIANMTDG 1166 >At1g16500.1 68414.m01973 expressed protein Length = 259 Score = 31.1 bits (67), Expect = 1.6 Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 5/55 (9%) Query: 403 DGPHPGYESDDAQTSFQVQVSRPGRSSY----GENPKCPQCHPAYLKPGSCEPCI 453 DG + G S S QV PG SY NPKCP+CH P +P I Sbjct: 200 DGVYDGTASATVAAS-QVAAGCPGCLSYVFVAKNNPKCPRCHSFVPLPAMKKPKI 253 >At5g28235.1 68418.m03421 Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; simlar to At4g08430, At5g45570 Length = 568 Score = 30.7 bits (66), Expect = 2.1 Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 7/85 (8%) Query: 50 RDKPFVSDEEMSQRTPRPDILSVPLTSKYYDGLKEAESKFLLHP-----DNDIVGVADTI 104 + K V+ E++ + P+P++ + + D K + K + P D+D+V V D + Sbjct: 216 KKKTIVNVEKVEK--PKPEMKKTVVKVEKVDSPKPLQKKSVAAPTTKTFDDDVVDVTDKV 273 Query: 105 SGDEDNILDSAKQNYRPPTSWSTRK 129 + D + S+++ + PT K Sbjct: 274 NADNLKMASSSEETFSNPTDQMANK 298 >At1g62130.1 68414.m07010 AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family Length = 1025 Score = 30.7 bits (66), Expect = 2.1 Identities = 22/68 (32%), Positives = 32/68 (47%) Query: 45 LLIGQRDKPFVSDEEMSQRTPRPDILSVPLTSKYYDGLKEAESKFLLHPDNDIVGVADTI 104 L++ ++PF DE + +R P ++ +P LK SK L PD DI VA Sbjct: 865 LVLAATNRPFDLDEAVIRRLPHRLMVGLPDARSRSKILKVILSKEDLSPDFDIDEVASMT 924 Query: 105 SGDEDNIL 112 +G N L Sbjct: 925 NGYSGNDL 932 >At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein Lycopersicon esculentum, proline-rich cell wall protein [Medicago sativa] GI:3818416; contains Pfam profile PF00234 Protease inhibitor/seed storage/LTP family Length = 334 Score = 29.9 bits (64), Expect = 3.7 Identities = 29/94 (30%), Positives = 35/94 (37%), Gaps = 5/94 (5%) Query: 295 VKSKVPKPEQVLLPPK----KDYSQSPLDSTTMGPPIYYEWKWAVPAFGLLPPKEGNITN 350 VK PKP V PK K + + P PP P PK + Sbjct: 60 VKPPTPKPPTVKPHPKPPTVKPHPKPPTVKPHPKPPTVKPPHPKPPTKPHPHPKPPIVKP 119 Query: 351 STALPTKSPKTG-KSPFSTARRTTIKAEDATPKP 383 T P +PK K P ST + T K +TPKP Sbjct: 120 PTKPPPSTPKPPTKPPPSTPKPPTTKPPPSTPKP 153 >At1g10620.1 68414.m01204 protein kinase family protein contains serine/threonine protein kinases active-site signature, PROSITE:PS00108 Length = 718 Score = 29.9 bits (64), Expect = 3.7 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 2/63 (3%) Query: 121 PPTSWSTRKRRPNVQINNIDSLAGAASQEPGPTIRP-QPESRDTSLKNKGNQPERELMPP 179 PP S + P NNI P P P P S++ S ++G+ P L+PP Sbjct: 129 PPPSLVNQLPDPRPNDNNILEPINNPISLPSPPSTPFSPPSQENS-GSQGSPPLSSLLPP 187 Query: 180 LLP 182 +LP Sbjct: 188 MLP 190 >At1g02990.2 68414.m00269 expressed protein similar to mature-parasite-infected erythrocyte surface antigen (GI:160409) {Plasmodium falciparum} Length = 1238 Score = 29.9 bits (64), Expect = 3.7 Identities = 49/229 (21%), Positives = 88/229 (38%), Gaps = 23/229 (10%) Query: 56 SDEEMSQRTPRPDILSVPLTS-----KYYDGLKEAESKFLLHPDNDIVGVADTISGDEDN 110 S EE+ +T + +LS S K D + ++ + +L N + + EDN Sbjct: 292 SCEELVSKTMKLPLLSCLSPSYIHPAKEIDNVSDSNVESILRGTNKDAALMGSKPELEDN 351 Query: 111 ILDSAKQNYRPPTSWSTRKRRPNVQINNIDSLAGAASQEPGPTIRPQPESRDTSLKNKGN 170 ++ + ++ + S + RK ++ ++SL +E P+I E D S KG Sbjct: 352 VVAFSDRSVKETESINVRKDVYLIKGEPLNSLESNPKREKAPSI----EHVDYSSVVKGT 407 Query: 171 QPERELMPPLLPSXXXXXXXXXXXQSSVYQF---------IKRFDPNSPDSIKTAITQSE 221 Q E +L S SS+ + N PD ++ I +SE Sbjct: 408 QSETRNEEQILKSKLPKVQRSQKGSSSIVTMNSQRGKDAAVNIIKKNVPDKLQEDIEESE 467 Query: 222 IIDLNKHLPEGQVSSEGQVS----SEDERTPKKNKSFGNKLNDFKTDND 266 + + E Q+S +E E+ ++N + G N K D + Sbjct: 468 HMCKGFFGDSKESKEEKQISPVLKAEKEKLSEEN-ALGESFNSVKNDEE 515 >At1g02990.1 68414.m00270 expressed protein similar to mature-parasite-infected erythrocyte surface antigen (GI:160409) {Plasmodium falciparum} Length = 1069 Score = 29.9 bits (64), Expect = 3.7 Identities = 49/229 (21%), Positives = 88/229 (38%), Gaps = 23/229 (10%) Query: 56 SDEEMSQRTPRPDILSVPLTS-----KYYDGLKEAESKFLLHPDNDIVGVADTISGDEDN 110 S EE+ +T + +LS S K D + ++ + +L N + + EDN Sbjct: 292 SCEELVSKTMKLPLLSCLSPSYIHPAKEIDNVSDSNVESILRGTNKDAALMGSKPELEDN 351 Query: 111 ILDSAKQNYRPPTSWSTRKRRPNVQINNIDSLAGAASQEPGPTIRPQPESRDTSLKNKGN 170 ++ + ++ + S + RK ++ ++SL +E P+I E D S KG Sbjct: 352 VVAFSDRSVKETESINVRKDVYLIKGEPLNSLESNPKREKAPSI----EHVDYSSVVKGT 407 Query: 171 QPERELMPPLLPSXXXXXXXXXXXQSSVYQF---------IKRFDPNSPDSIKTAITQSE 221 Q E +L S SS+ + N PD ++ I +SE Sbjct: 408 QSETRNEEQILKSKLPKVQRSQKGSSSIVTMNSQRGKDAAVNIIKKNVPDKLQEDIEESE 467 Query: 222 IIDLNKHLPEGQVSSEGQVS----SEDERTPKKNKSFGNKLNDFKTDND 266 + + E Q+S +E E+ ++N + G N K D + Sbjct: 468 HMCKGFFGDSKESKEEKQISPVLKAEKEKLSEEN-ALGESFNSVKNDEE 515 >At1g09230.1 68414.m01030 RNA recognition motif (RRM)-containing protein contains INTERPRO:IPR000504 RNA-binding region RNP-1 (RNA recognition motif) domain Length = 442 Score = 29.5 bits (63), Expect = 4.9 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%) Query: 52 KPFVSDEEMSQ-RTPRPDILSVPLTSKYYDG 81 KPF S EE+ + R P DILS+P+ Y G Sbjct: 318 KPFASLEELEKGRLPPQDILSLPMFKNYTAG 348 >At3g23510.1 68416.m02960 cyclopropane fatty acid synthase, putative / CPA-FA synthase, putative similar to cyclopropane synthase [Sterculia foetida] GI:21069167; contains Pfam profile PF02353: Cyclopropane-fatty-acyl-phospholipid synthase Length = 867 Score = 29.1 bits (62), Expect = 6.4 Identities = 10/23 (43%), Positives = 17/23 (73%) Query: 379 ATPKPRNVEYNISSYYVPDYVFP 401 +TP+ R EY +SS ++ +Y+FP Sbjct: 736 STPEERYNEYRLSSDFIKEYIFP 758 >At3g21270.1 68416.m02688 Dof-type zinc finger domain-containing protein (ADOF2) identical to Dof zinc finger protein ADOF2 GI:3608263 from [Arabidopsis thaliana]; identical to cDNA adof2 mRNA for Dof zinc finger protein GI:3608262; contains Pfam profile PF02701: Dof domain, zinc finger Length = 204 Score = 29.1 bits (62), Expect = 6.4 Identities = 14/45 (31%), Positives = 22/45 (48%) Query: 341 LPPKEGNITNSTALPTKSPKTGKSPFSTARRTTIKAEDATPKPRN 385 +P G+ N+T T S + SP ++++ K D P PRN Sbjct: 72 VPVGGGSRKNATKRSTSSSSSASSPSNSSQNKKTKNPDPDPDPRN 116 >At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type Length = 270 Score = 29.1 bits (62), Expect = 6.4 Identities = 14/61 (22%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Query: 100 VADTISGDEDNILDSAKQNYRPPTSWSTRKRRPNVQINNIDSLAGAASQEPGPTIRPQPE 159 +++T + D ++ + A N P S++ RR ++ N + + ++S P P +P P+ Sbjct: 1 MSNTSNSDPNSDIPFASSNVTLP-SYNQNPRRKRTKLTNNEVGSSSSSPRPKPVTQPDPD 59 Query: 160 S 160 + Sbjct: 60 A 60 >At1g02890.1 68414.m00256 AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family; similar to mitochondrial sorting protein 1 (MSP1) (TAT-binding homolog 4) (Swiss-Prot:P28737) [Saccharomyces cerevisiae] Length = 1252 Score = 29.1 bits (62), Expect = 6.4 Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 1/78 (1%) Query: 30 YMVNCS-MAERDYDANLLIGQRDKPFVSDEEMSQRTPRPDILSVPLTSKYYDGLKEAESK 88 +M+N + +D + L++ ++PF DE + +R PR ++++P ++ L +K Sbjct: 1076 FMINWDGLRTKDKERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDSANRSKILSVILAK 1135 Query: 89 FLLHPDNDIVGVADTISG 106 + D D+ +A+ G Sbjct: 1136 EEMAEDVDLEAIANMTDG 1153 >At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99829 Copine I {Homo sapiens} Length = 468 Score = 28.7 bits (61), Expect = 8.5 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Query: 308 PPKKDYSQSPLDSTTMGPPIYYEWKWAVPAFGLLPPKEGNITNSTALPTKSPK 360 PP Y+Q P + T PP+Y ++ P++ P + N L K K Sbjct: 47 PPPPSYAQPP-EYTQPPPPLYSTQPYSAPSYSAPPSQSYGSDNKKRLERKYSK 98 >At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99829 Copine I {Homo sapiens} Length = 468 Score = 28.7 bits (61), Expect = 8.5 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Query: 308 PPKKDYSQSPLDSTTMGPPIYYEWKWAVPAFGLLPPKEGNITNSTALPTKSPK 360 PP Y+Q P + T PP+Y ++ P++ P + N L K K Sbjct: 47 PPPPSYAQPP-EYTQPPPPLYSTQPYSAPSYSAPPSQSYGSDNKKRLERKYSK 98 >At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99829 Copine I {Homo sapiens} Length = 468 Score = 28.7 bits (61), Expect = 8.5 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Query: 308 PPKKDYSQSPLDSTTMGPPIYYEWKWAVPAFGLLPPKEGNITNSTALPTKSPK 360 PP Y+Q P + T PP+Y ++ P++ P + N L K K Sbjct: 47 PPPPSYAQPP-EYTQPPPPLYSTQPYSAPSYSAPPSQSYGSDNKKRLERKYSK 98 >At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99829 Copine I {Homo sapiens} Length = 468 Score = 28.7 bits (61), Expect = 8.5 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Query: 308 PPKKDYSQSPLDSTTMGPPIYYEWKWAVPAFGLLPPKEGNITNSTALPTKSPK 360 PP Y+Q P + T PP+Y ++ P++ P + N L K K Sbjct: 47 PPPPSYAQPP-EYTQPPPPLYSTQPYSAPSYSAPPSQSYGSDNKKRLERKYSK 98 >At3g47610.1 68416.m05183 expressed protein Length = 408 Score = 28.7 bits (61), Expect = 8.5 Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 8/100 (8%) Query: 74 LTSKYYDGLKEAE--SKFLLHPDNDIVGVADTISGDEDNILDSAKQNYRPPTSWSTRKRR 131 L K + ++EAE K + D++G ++ D+ + L+S + PP + + + + Sbjct: 263 LVRKKREEIEEAERVKKSKVVMTFDLIGRKVLLNEDDISELESGNRILGPPETKNVNRIK 322 Query: 132 PNVQINNIDSLAGAASQEPGPTIRPQPESRDTSLKNKGNQ 171 PN + +PGPT +P S T NK N+ Sbjct: 323 PNPTARLVPIFL-----DPGPT-EKKPNSTTTKKDNKKNR 356 Database: arabidopsis Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.312 0.132 0.396 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,994,895 Number of Sequences: 28952 Number of extensions: 551867 Number of successful extensions: 1344 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 17 Number of HSP's that attempted gapping in prelim test: 1330 Number of HSP's gapped (non-prelim): 29 length of query: 456 length of database: 12,070,560 effective HSP length: 83 effective length of query: 373 effective length of database: 9,667,544 effective search space: 3605993912 effective search space used: 3605993912 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (21.8 bits) S2: 61 (28.7 bits)
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