Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001326-TA|BGIBMGA001326-PA|IPR013893|Ribonuclease P,
Rpp40
(299 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069830-1|AAL39975.1| 1218|Drosophila melanogaster SD07723p pro... 31 1.9
AY061583-1|AAL29131.1| 842|Drosophila melanogaster SD03196p pro... 31 1.9
AE013599-1765|AAF58335.2| 1218|Drosophila melanogaster CG12295-P... 31 1.9
AY047563-1|AAK77295.1| 1721|Drosophila melanogaster GH07636p pro... 30 4.4
AF047475-1|AAC27550.1| 6658|Drosophila melanogaster projectin pr... 30 4.4
AE014135-137|AAS64601.1| 8647|Drosophila melanogaster CG32019-PE... 30 4.4
AE014135-136|AAS64600.1| 8648|Drosophila melanogaster CG32019-PC... 30 4.4
AE014135-135|AAS64599.1| 8930|Drosophila melanogaster CG32019-PD... 30 4.4
AE014135-134|AAF59316.4| 8943|Drosophila melanogaster CG32019-PA... 30 4.4
>AY069830-1|AAL39975.1| 1218|Drosophila melanogaster SD07723p
protein.
Length = 1218
Score = 31.1 bits (67), Expect = 1.9
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 146 IKNYDKIRQGLKKLGKFDFDVIWEPTNEDICPSTIAKYFYELNYKVTAKPPVLK--TVSP 203
+ NY + LG+ D VIW DI + ++ Y +++N K VL+ V
Sbjct: 445 VLNYIPVMARPLVLGRHDHPVIWSQVYADIEDTKLSDYLWDINQCEYQKADVLEYWQVHD 504
Query: 204 TITEIPSVSHASIDELVEWTGILAHNGNLSQYETYISTYCPPESERSLHSTNISVII 260
+ E PS H ++ T + N+ Q+ T +S P +R ++T I+ I+
Sbjct: 505 RMLE-PSEMHRRKYRRMKETWNQPVDSNVYQFMTTVSM---PIYDRRENATRIANIL 557
>AY061583-1|AAL29131.1| 842|Drosophila melanogaster SD03196p
protein.
Length = 842
Score = 31.1 bits (67), Expect = 1.9
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 146 IKNYDKIRQGLKKLGKFDFDVIWEPTNEDICPSTIAKYFYELNYKVTAKPPVLK--TVSP 203
+ NY + LG+ D VIW DI + ++ Y +++N K VL+ V
Sbjct: 69 VLNYIPVMARPLVLGRHDHPVIWSQVYADIEDTKLSDYLWDINQCEYQKADVLEYWQVHD 128
Query: 204 TITEIPSVSHASIDELVEWTGILAHNGNLSQYETYISTYCPPESERSLHSTNISVII 260
+ E PS H ++ T + N+ Q+ T +S P +R ++T I+ I+
Sbjct: 129 RMLE-PSEMHRRKYRRMKETWNQPVDSNVYQFMTTVSM---PIYDRRENATRIANIL 181
>AE013599-1765|AAF58335.2| 1218|Drosophila melanogaster CG12295-PB
protein.
Length = 1218
Score = 31.1 bits (67), Expect = 1.9
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 146 IKNYDKIRQGLKKLGKFDFDVIWEPTNEDICPSTIAKYFYELNYKVTAKPPVLK--TVSP 203
+ NY + LG+ D VIW DI + ++ Y +++N K VL+ V
Sbjct: 445 VLNYIPVMARPLVLGRHDHPVIWSQVYADIEDTKLSDYLWDINQCEYQKADVLEYWQVHD 504
Query: 204 TITEIPSVSHASIDELVEWTGILAHNGNLSQYETYISTYCPPESERSLHSTNISVII 260
+ E PS H ++ T + N+ Q+ T +S P +R ++T I+ I+
Sbjct: 505 RMLE-PSEMHRRKYRRMKETWNQPVDSNVYQFMTTVSM---PIYDRRENATRIANIL 557
>AY047563-1|AAK77295.1| 1721|Drosophila melanogaster GH07636p protein.
Length = 1721
Score = 29.9 bits (64), Expect = 4.4
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 146 IKNYDKIRQGLKKLGKFDFDVIWEPTNEDICPSTIAKYFYELN 188
+++ D + + +G FDV+W N++I PS +Y E N
Sbjct: 1539 VRDGDAVNLACRIIGAQHFDVVWLHNNKEIKPSKDFQYTNEAN 1581
>AF047475-1|AAC27550.1| 6658|Drosophila melanogaster projectin
protein.
Length = 6658
Score = 29.9 bits (64), Expect = 4.4
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 146 IKNYDKIRQGLKKLGKFDFDVIWEPTNEDICPSTIAKYFYELN 188
+++ D + + +G FDV+W N++I PS +Y E N
Sbjct: 6476 VRDGDAVNLACRIIGAQHFDVVWLHNNKEIKPSKDFQYTNEAN 6518
>AE014135-137|AAS64601.1| 8647|Drosophila melanogaster CG32019-PE,
isoform E protein.
Length = 8647
Score = 29.9 bits (64), Expect = 4.4
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 146 IKNYDKIRQGLKKLGKFDFDVIWEPTNEDICPSTIAKYFYELN 188
+++ D + + +G FDV+W N++I PS +Y E N
Sbjct: 8465 VRDGDAVNLACRIIGAQHFDVVWLHNNKEIKPSKDFQYTNEAN 8507
>AE014135-136|AAS64600.1| 8648|Drosophila melanogaster CG32019-PC,
isoform C protein.
Length = 8648
Score = 29.9 bits (64), Expect = 4.4
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 146 IKNYDKIRQGLKKLGKFDFDVIWEPTNEDICPSTIAKYFYELN 188
+++ D + + +G FDV+W N++I PS +Y E N
Sbjct: 8466 VRDGDAVNLACRIIGAQHFDVVWLHNNKEIKPSKDFQYTNEAN 8508
>AE014135-135|AAS64599.1| 8930|Drosophila melanogaster CG32019-PD,
isoform D protein.
Length = 8930
Score = 29.9 bits (64), Expect = 4.4
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 146 IKNYDKIRQGLKKLGKFDFDVIWEPTNEDICPSTIAKYFYELN 188
+++ D + + +G FDV+W N++I PS +Y E N
Sbjct: 8748 VRDGDAVNLACRIIGAQHFDVVWLHNNKEIKPSKDFQYTNEAN 8790
>AE014135-134|AAF59316.4| 8943|Drosophila melanogaster CG32019-PA,
isoform A protein.
Length = 8943
Score = 29.9 bits (64), Expect = 4.4
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 146 IKNYDKIRQGLKKLGKFDFDVIWEPTNEDICPSTIAKYFYELN 188
+++ D + + +G FDV+W N++I PS +Y E N
Sbjct: 8761 VRDGDAVNLACRIIGAQHFDVVWLHNNKEIKPSKDFQYTNEAN 8803
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.320 0.137 0.418
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,973,042
Number of Sequences: 52641
Number of extensions: 677690
Number of successful extensions: 1656
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1646
Number of HSP's gapped (non-prelim): 13
length of query: 299
length of database: 24,830,863
effective HSP length: 85
effective length of query: 214
effective length of database: 20,356,378
effective search space: 4356264892
effective search space used: 4356264892
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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