GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001324-TA|BGIBMGA001324-PA|IPR004272|Odorant binding
protein, IPR013053|Hormone binding
         (236 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     24   1.2  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    24   1.2  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           24   1.2  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    24   1.2  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   4.8  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/51 (21%), Positives = 24/51 (47%)

Query: 171 KVEYQFQNLFNGNRDLAKTIHDFANSNWREIFQEVAPPMVKAIVSKIIHET 221
           +++Y + N  N N ++    + + N    ++     PP+   I   I+H+T
Sbjct: 59  QLQYGYHNHQNYNSNVLSNGYGYGNYYHPQLHSHHGPPIHHQIRPPILHDT 109


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/51 (21%), Positives = 24/51 (47%)

Query: 171 KVEYQFQNLFNGNRDLAKTIHDFANSNWREIFQEVAPPMVKAIVSKIIHET 221
           +++Y + N  N N ++    + + N    ++     PP+   I   I+H+T
Sbjct: 59  QLQYGYHNHQNYNSNVLSNGYGYGNYYHPQLHSHHGPPIHHQIRPPILHDT 109


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/51 (21%), Positives = 24/51 (47%)

Query: 171 KVEYQFQNLFNGNRDLAKTIHDFANSNWREIFQEVAPPMVKAIVSKIIHET 221
           +++Y + N  N N ++    + + N    ++     PP+   I   I+H+T
Sbjct: 59  QLQYGYHNHQNYNSNVLSNGYGYGNYYHPQLHSHHGPPIHHQIRPPILHDT 109


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/51 (21%), Positives = 24/51 (47%)

Query: 171 KVEYQFQNLFNGNRDLAKTIHDFANSNWREIFQEVAPPMVKAIVSKIIHET 221
           +++Y + N  N N ++    + + N    ++     PP+   I   I+H+T
Sbjct: 59  QLQYGYHNHQNYNSNVLSNGYGYGNYYHPQLHSHHGPPIHHQIRPPILHDT 109


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/23 (34%), Positives = 14/23 (60%)

Query: 203 QEVAPPMVKAIVSKIIHETFKLF 225
           +++ PP ++ I+    HE F LF
Sbjct: 61  KDITPPDLEGILDLGRHENFSLF 83


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.137    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,748
Number of Sequences: 317
Number of extensions: 1515
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 236
length of database: 114,650
effective HSP length: 55
effective length of query: 181
effective length of database: 97,215
effective search space: 17595915
effective search space used: 17595915
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 42 (21.0 bits)