Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001322-TA|BGIBMGA001322-PA|IPR000626|Ubiquitin
(74 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VNB2 Cluster: CG1172-PA; n=4; Endopterygota|Rep: CG11... 56 1e-07
UniRef50_Q8WUN7 Cluster: Ubiquitin domain-containing protein 2; ... 53 1e-06
UniRef50_Q4RRW6 Cluster: Chromosome 7 SCAF15001, whole genome sh... 41 0.004
UniRef50_Q5C3C2 Cluster: SJCHGC05634 protein; n=1; Schistosoma j... 35 0.28
UniRef50_Q9NIF3 Cluster: Ubiquitin-like fusion protein SonA; n=2... 35 0.37
UniRef50_A6RQL0 Cluster: Ubiquitin; n=2; Sclerotiniaceae|Rep: Ub... 35 0.37
UniRef50_Q5KK31 Cluster: Ribosomal chaperone, putative; n=1; Fil... 32 2.6
UniRef50_Q7QYQ3 Cluster: GLP_393_14301_14531; n=1; Giardia lambl... 31 4.5
UniRef50_Q4Q1E1 Cluster: Putative uncharacterized protein; n=3; ... 31 4.5
UniRef50_A2E296 Cluster: Ubiquitin family protein; n=1; Trichomo... 31 6.0
UniRef50_Q0D1M7 Cluster: Putative uncharacterized protein; n=1; ... 31 6.0
UniRef50_O13652 Cluster: Protein sfi1; n=1; Schizosaccharomyces ... 31 6.0
UniRef50_Q1FKA2 Cluster: Binding-protein-dependent transport sys... 30 7.9
>UniRef50_Q9VNB2 Cluster: CG1172-PA; n=4; Endopterygota|Rep:
CG1172-PA - Drosophila melanogaster (Fruit fly)
Length = 249
Score = 56.0 bits (129), Expect = 1e-07
Identities = 24/43 (55%), Positives = 32/43 (74%)
Query: 27 AQENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVSTD 69
A E ++ QRWFY GKLLGD++ ++E I GYVVQVIV+T+
Sbjct: 193 AAEGVDACCQRWFYSGKLLGDKVPIDECSIHQGYVVQVIVNTE 235
>UniRef50_Q8WUN7 Cluster: Ubiquitin domain-containing protein 2;
n=43; Eukaryota|Rep: Ubiquitin domain-containing protein
2 - Homo sapiens (Human)
Length = 234
Score = 53.2 bits (122), Expect = 1e-06
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 27 AQENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVSTDPQPPS 74
A E +EP QRWF+ G+ L D++ EE KI YVVQVIVS Q P+
Sbjct: 183 AAEGVEPGSQRWFFSGRPLTDKMKFEELKIPKDYVVQVIVSQPVQNPT 230
>UniRef50_Q4RRW6 Cluster: Chromosome 7 SCAF15001, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 7
SCAF15001, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 280
Score = 41.1 bits (92), Expect = 0.004
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 27 AQENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVS 67
+ E + QRWF+ G+ L DRL +++ I+ YVVQVI+S
Sbjct: 238 SHEGVAASTQRWFFSGRPLTDRLRLDQLNISRDYVVQVILS 278
>UniRef50_Q5C3C2 Cluster: SJCHGC05634 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05634 protein - Schistosoma
japonicum (Blood fluke)
Length = 257
Score = 35.1 bits (77), Expect = 0.28
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 40 YGGKLLGDRLLVEEAKITPGYVVQVIVSTDPQP 72
+GGK+L D +E+ KI G+++ +++S QP
Sbjct: 55 FGGKILKDEDTIEQLKIKDGFIIHLVISKQQQP 87
>UniRef50_Q9NIF3 Cluster: Ubiquitin-like fusion protein SonA; n=2;
Dictyostelium discoideum|Rep: Ubiquitin-like fusion
protein SonA - Dictyostelium discoideum (Slime mold)
Length = 523
Score = 34.7 bits (76), Expect = 0.37
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 35 RQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVSTDPQPP 73
+QR Y G++L D ++E KI G+ V ++ P PP
Sbjct: 41 QQRIIYSGRILKDHQTLDEIKIQDGHTVHLVKGAAPPPP 79
>UniRef50_A6RQL0 Cluster: Ubiquitin; n=2; Sclerotiniaceae|Rep:
Ubiquitin - Botryotinia fuckeliana B05.10
Length = 77
Score = 34.7 bits (76), Expect = 0.37
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 28 QENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVS 67
+E I P +QR YGGK + D LV++ + PG + ++++
Sbjct: 33 KEGIPPVQQRLIYGGKQMADDKLVQDYDLEPGATLHLVLA 72
>UniRef50_Q5KK31 Cluster: Ribosomal chaperone, putative; n=1;
Filobasidiella neoformans|Rep: Ribosomal chaperone,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 88
Score = 31.9 bits (69), Expect = 2.6
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 31 IEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVS 67
I P +QR +GGK +GD +++ KI G + ++++
Sbjct: 42 IPPVQQRLIFGGKAMGDDKTIQDYKIQAGAAIHLVLA 78
>UniRef50_Q7QYQ3 Cluster: GLP_393_14301_14531; n=1; Giardia
lamblia ATCC 50803|Rep: GLP_393_14301_14531 - Giardia
lamblia ATCC 50803
Length = 76
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 28 QENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVS 67
QE I P +Q+ Y + L + VEEA + G +Q++V+
Sbjct: 33 QEGIHPAQQKMLYLAQQLQNTTTVEEANLKAGITIQLVVN 72
>UniRef50_Q4Q1E1 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 2697
Score = 31.1 bits (67), Expect = 4.5
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 8 WNILFDVRRLSLRADPFASAQENIEPWRQRWFYGGKLLGDRLLVEEAKITPGY 60
W ++ D +++LRA A A E +P+ YGG ++ D L + + G+
Sbjct: 773 WAMMSDDMQVTLRAAAAALADETAQPFTPENLYGGAMVCDALHIPLGALETGW 825
>UniRef50_A2E296 Cluster: Ubiquitin family protein; n=1;
Trichomonas vaginalis G3|Rep: Ubiquitin family protein
- Trichomonas vaginalis G3
Length = 405
Score = 30.7 bits (66), Expect = 6.0
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 26 SAQENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVSTDPQPP 73
+A+ N++ + R Y GK+L D + I G+ V ++VS P
Sbjct: 32 AAERNLDATKIRLIYSGKILADTNTISFYNIPDGHAVHMVVSGKSAAP 79
>UniRef50_Q0D1M7 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 860
Score = 30.7 bits (66), Expect = 6.0
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 32 EPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQ 63
EP R WF G +G++L +EE K P Y+++
Sbjct: 417 EPVRVEWF-NGCTIGEKLALEETKALPEYMIK 447
>UniRef50_O13652 Cluster: Protein sfi1; n=1; Schizosaccharomyces
pombe|Rep: Protein sfi1 - Schizosaccharomyces pombe
(Fission yeast)
Length = 840
Score = 30.7 bits (66), Expect = 6.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 3 QKLIHWNI-LFDVRRLSLRADPFASAQENIEPWRQ 36
Q LI W I L D++ LS+RA+ + E I W Q
Sbjct: 538 QYLIKWRISLLDIKELSIRAEKLHTTNEIIGVWNQ 572
>UniRef50_Q1FKA2 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=33;
Firmicutes|Rep: Binding-protein-dependent transport
systems inner membrane component precursor - Clostridium
phytofermentans ISDg
Length = 426
Score = 30.3 bits (65), Expect = 7.9
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 42 GKLLGDRLLVEEAKITPGYVVQVIVS 67
G L+G L + AKI PGY+V +I+S
Sbjct: 142 GSLIGLALSLRAAKINPGYIVLIILS 167
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.323 0.140 0.447
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,993,510
Number of Sequences: 1657284
Number of extensions: 2822089
Number of successful extensions: 5233
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 5222
Number of HSP's gapped (non-prelim): 13
length of query: 74
length of database: 575,637,011
effective HSP length: 53
effective length of query: 21
effective length of database: 487,800,959
effective search space: 10243820139
effective search space used: 10243820139
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 65 (30.3 bits)
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