Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001322-TA|BGIBMGA001322-PA|IPR000626|Ubiquitin
(74 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC8D2.05c |sfi1||spindle pole body protein Sfi1|Schizosaccharo... 31 0.024
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 28 0.13
SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like pro... 26 0.53
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 26 0.70
SPAC12G12.16c ||SPAC18B11.01c|nuclease, XP-G family|Schizosaccha... 25 1.6
SPCC1442.16c |zta1|SPCC285.01c|NADPH quinone oxidoreductase/ARE-... 24 2.8
SPAC15F9.03c |nxt2|nft2, ntf2, ntf2, nft2, SPAC1B9.01c|nuclear t... 23 6.5
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 23 6.5
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 23 6.5
SPBC4.06 |||acid phosphatase |Schizosaccharomyces pombe|chr 2|||... 22 8.6
SPAC6C3.04 |cit1||citrate synthase|Schizosaccharomyces pombe|chr... 22 8.6
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c... 22 8.6
SPBC19C7.09c |uve1|uvde|endonuclease Uve1 |Schizosaccharomyces p... 22 8.6
>SPBC8D2.05c |sfi1||spindle pole body protein
Sfi1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 840
Score = 30.7 bits (66), Expect = 0.024
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 3 QKLIHWNI-LFDVRRLSLRADPFASAQENIEPWRQ 36
Q LI W I L D++ LS+RA+ + E I W Q
Sbjct: 538 QYLIKWRISLLDIKELSIRAEKLHTTNEIIGVWNQ 572
>SPAC26A3.16 |dph1|ucp5|UBA domain protein
Dph1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 354
Score = 28.3 bits (60), Expect = 0.13
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 30 NIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVSTDPQP 72
+IE RQR Y G++L D ++ KI G+ + ++ + P
Sbjct: 38 DIEKERQRLIYAGRVLKDEESLKTYKIQDGHSIHLVKTLGQNP 80
>SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like
protein modifier Ned8|Schizosaccharomyces pombe|chr
2|||Manual
Length = 78
Score = 26.2 bits (55), Expect = 0.53
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 28 QENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVS 67
+E I P +QR Y GK + D E + G V+ ++++
Sbjct: 33 KEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLA 72
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 25.8 bits (54), Expect = 0.70
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 28 QENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVS 67
Q+N E RQ+ Y G++L D V E I + +VS
Sbjct: 34 QQNYEVERQKLIYSGRILADDKTVGEYNIKEQDFIVCMVS 73
>SPAC12G12.16c ||SPAC18B11.01c|nuclease, XP-G
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 496
Score = 24.6 bits (51), Expect = 1.6
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 10 ILFDVRRLSLRADPFASAQENIEPWRQRWFYGGKLLGDRL 49
+LFD+R L+ R +PF AQ N E F +L+ D+L
Sbjct: 148 LLFDLRSLNERDNPF-HAQNNAENLENATFV--RLIVDKL 184
>SPCC1442.16c |zta1|SPCC285.01c|NADPH quinone
oxidoreductase/ARE-binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 329
Score = 23.8 bits (49), Expect = 2.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 49 LLVEEAKITPGYVVQVIVSTDPQP 72
LLV+ +K P V+QVI P+P
Sbjct: 4 LLVQVSKTGPSSVLQVITKEIPKP 27
>SPAC15F9.03c |nxt2|nft2, ntf2, ntf2, nft2, SPAC1B9.01c|nuclear
transport factor Nxt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 123
Score = 22.6 bits (46), Expect = 6.5
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 39 FYGGKLLGDRLLVEEAKITPGYVVQVIVST-DPQP 72
F G +L G + +VE+ P VQ +ST D QP
Sbjct: 38 FEGAQLQGTKAIVEKLVSLPFQRVQHRISTLDAQP 72
>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 22.6 bits (46), Expect = 6.5
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 16 RLSLRADPFASAQENIEPWRQRWFY 40
RL R PF + + ++E W Q++++
Sbjct: 99 RLLTRIIPFLNEKLDLEEWHQKFWW 123
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 22.6 bits (46), Expect = 6.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 3 QKLIHWNILFDVRRLSLRADPFASAQENIEPW 34
QKL W++LFD + A+ + + W
Sbjct: 2604 QKLNQWDVLFDFSKQEGCAELYLECAWRLSDW 2635
>SPBC4.06 |||acid phosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 462
Score = 22.2 bits (45), Expect = 8.6
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 17 LSLRADPFASAQENIEPWRQRWFYG 41
LS+R + F A++N P+ + YG
Sbjct: 303 LSMRMENFVVAEKNGSPYHRLALYG 327
>SPAC6C3.04 |cit1||citrate synthase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 473
Score = 22.2 bits (45), Expect = 8.6
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 50 LVEEAKITPGYVVQVIVSTDPQ 71
L+ ++ PGY V+ TDP+
Sbjct: 344 LLNSGRVVPGYGHAVLRKTDPR 365
>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 871
Score = 22.2 bits (45), Expect = 8.6
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 29 ENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVI 65
+ IE + Q W+Y +++ L+ VVQVI
Sbjct: 459 QEIENYCQNWYYAFQVVQVFLVTTMTSAATSAVVQVI 495
>SPBC19C7.09c |uve1|uvde|endonuclease Uve1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 22.2 bits (45), Expect = 8.6
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 2 LQKLIHWNILFDVRRLSLRAD--PFAS 26
L KL+ WN F + + + +D PFAS
Sbjct: 296 LIKLVEWNHNFGIHFMRVSSDLFPFAS 322
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.323 0.140 0.447
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 342,132
Number of Sequences: 5004
Number of extensions: 10766
Number of successful extensions: 31
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 21
Number of HSP's gapped (non-prelim): 13
length of query: 74
length of database: 2,362,478
effective HSP length: 54
effective length of query: 20
effective length of database: 2,092,262
effective search space: 41845240
effective search space used: 41845240
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 45 (22.2 bits)
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