Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001322-TA|BGIBMGA001322-PA|IPR000626|Ubiquitin
(74 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC007331-1|AAH07331.1| 227|Homo sapiens ubiquitin domain contai... 57 1e-08
AL359388-3|CAI14191.1| 227|Homo sapiens ubiquitin domain contai... 57 1e-08
AK222597-1|BAD96317.1| 227|Homo sapiens ubiquitin domain contai... 57 1e-08
AK021869-1|BAB13921.1| 227|Homo sapiens protein ( Homo sapiens ... 57 1e-08
BC019910-1|AAH19910.1| 190|Homo sapiens UBTD2 protein protein. 53 1e-07
AF251700-1|AAL99389.1| 106|Homo sapiens ubiquitin-like protein ... 53 1e-07
D23662-1|BAA04889.1| 81|Homo sapiens ubiquitin-like protein pr... 30 1.3
CR407662-1|CAG28590.1| 81|Homo sapiens NEDD8 protein. 30 1.3
BC104664-1|AAI04665.1| 81|Homo sapiens neural precursor cell e... 30 1.3
BC104201-1|AAI04202.1| 81|Homo sapiens neural precursor cell e... 30 1.3
BC104200-1|AAI04201.1| 81|Homo sapiens neural precursor cell e... 30 1.3
AL390241-5|CAI13550.1| 1127|Homo sapiens tripartite motif-contai... 28 5.3
AL390241-4|CAI13551.1| 1110|Homo sapiens tripartite motif-contai... 28 5.3
AL390241-2|CAI13548.1| 887|Homo sapiens tripartite motif-contai... 28 5.3
AL035410-4|CAI21896.1| 1127|Homo sapiens tripartite motif-contai... 28 5.3
AL035410-3|CAI21897.1| 1110|Homo sapiens tripartite motif-contai... 28 5.3
AL035410-2|CAI21895.1| 887|Homo sapiens tripartite motif-contai... 28 5.3
AF220137-1|AAG53510.1| 1110|Homo sapiens tripartite motif protei... 28 5.3
AF220136-1|AAG53509.1| 1127|Homo sapiens tripartite motif protei... 28 5.3
AF119043-1|AAD17259.1| 1120|Homo sapiens transcriptional interme... 28 5.3
AB029036-1|BAA83065.1| 1131|Homo sapiens KIAA1113 protein protein. 28 5.3
>BC007331-1|AAH07331.1| 227|Homo sapiens ubiquitin domain
containing 1 protein.
Length = 227
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 27 AQENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVSTDPQP 72
AQE IEP QRWF+ GKLL DR ++E KI +V+QVI++ P P
Sbjct: 180 AQEGIEPSWQRWFFSGKLLTDRTRLQETKIQKDFVIQVIINQPPPP 225
>AL359388-3|CAI14191.1| 227|Homo sapiens ubiquitin domain
containing 1 protein.
Length = 227
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 27 AQENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVSTDPQP 72
AQE IEP QRWF+ GKLL DR ++E KI +V+QVI++ P P
Sbjct: 180 AQEGIEPSWQRWFFSGKLLTDRTRLQETKIQKDFVIQVIINQPPPP 225
>AK222597-1|BAD96317.1| 227|Homo sapiens ubiquitin domain
containing 1 variant protein.
Length = 227
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 27 AQENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVSTDPQP 72
AQE IEP QRWF+ GKLL DR ++E KI +V+QVI++ P P
Sbjct: 180 AQEGIEPSWQRWFFSGKLLTDRTRLQETKIQKDFVIQVIINQPPPP 225
>AK021869-1|BAB13921.1| 227|Homo sapiens protein ( Homo sapiens
cDNA FLJ11807 fis, clone HEMBA1006284. ).
Length = 227
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 27 AQENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVSTDPQP 72
AQE IEP QRWF+ GKLL DR ++E KI +V+QVI++ P P
Sbjct: 180 AQEGIEPSWQRWFFSGKLLTDRTRLQETKIQKDFVIQVIINQPPPP 225
>BC019910-1|AAH19910.1| 190|Homo sapiens UBTD2 protein protein.
Length = 190
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 27 AQENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVSTDPQPPS 74
A E +EP QRWF+ G+ L D++ EE KI YVVQVIVS Q P+
Sbjct: 139 AAEGVEPGSQRWFFSGRPLTDKMKFEELKIPKDYVVQVIVSQPVQNPT 186
>AF251700-1|AAL99389.1| 106|Homo sapiens ubiquitin-like protein
SB72 protein.
Length = 106
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 27 AQENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVSTDPQPPS 74
A E +EP QRWF+ G+ L D++ EE KI YVVQVIVS Q P+
Sbjct: 55 AAEGVEPGSQRWFFSGRPLTDKMKFEELKIPKDYVVQVIVSQPVQNPT 102
>D23662-1|BAA04889.1| 81|Homo sapiens ubiquitin-like protein
protein.
Length = 81
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 28 QENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVS 67
+E I P +QR Y GK + D + KI G V+ ++++
Sbjct: 33 KEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLA 72
>CR407662-1|CAG28590.1| 81|Homo sapiens NEDD8 protein.
Length = 81
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 28 QENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVS 67
+E I P +QR Y GK + D + KI G V+ ++++
Sbjct: 33 KEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLA 72
>BC104664-1|AAI04665.1| 81|Homo sapiens neural precursor cell
expressed, developmentally down-regulated 8 protein.
Length = 81
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 28 QENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVS 67
+E I P +QR Y GK + D + KI G V+ ++++
Sbjct: 33 KEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLA 72
>BC104201-1|AAI04202.1| 81|Homo sapiens neural precursor cell
expressed, developmentally down-regulated 8 protein.
Length = 81
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 28 QENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVS 67
+E I P +QR Y GK + D + KI G V+ ++++
Sbjct: 33 KEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLA 72
>BC104200-1|AAI04201.1| 81|Homo sapiens neural precursor cell
expressed, developmentally down-regulated 8 protein.
Length = 81
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 28 QENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVS 67
+E I P +QR Y GK + D + KI G V+ ++++
Sbjct: 33 KEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLA 72
>AL390241-5|CAI13550.1| 1127|Homo sapiens tripartite
motif-containing 33 protein.
Length = 1127
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 10 ILFDVRR-LSLRADPFASAQENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVST 68
I F +R L R DP +A I F+ ++ LV E+K PGY V+V
Sbjct: 435 ITFQLRHILKARCDPVPAANGAIRFHCDPTFWAKNVVNLGNLVIESKPAPGYTPNVVVGQ 494
Query: 69 DP 70
P
Sbjct: 495 VP 496
>AL390241-4|CAI13551.1| 1110|Homo sapiens tripartite
motif-containing 33 protein.
Length = 1110
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 10 ILFDVRR-LSLRADPFASAQENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVST 68
I F +R L R DP +A I F+ ++ LV E+K PGY V+V
Sbjct: 435 ITFQLRHILKARCDPVPAANGAIRFHCDPTFWAKNVVNLGNLVIESKPAPGYTPNVVVGQ 494
Query: 69 DP 70
P
Sbjct: 495 VP 496
>AL390241-2|CAI13548.1| 887|Homo sapiens tripartite
motif-containing 33 protein.
Length = 887
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 10 ILFDVRR-LSLRADPFASAQENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVST 68
I F +R L R DP +A I F+ ++ LV E+K PGY V+V
Sbjct: 171 ITFQLRHILKARCDPVPAANGAIRFHCDPTFWAKNVVNLGNLVIESKPAPGYTPNVVVGQ 230
Query: 69 DP 70
P
Sbjct: 231 VP 232
>AL035410-4|CAI21896.1| 1127|Homo sapiens tripartite
motif-containing 33 protein.
Length = 1127
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 10 ILFDVRR-LSLRADPFASAQENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVST 68
I F +R L R DP +A I F+ ++ LV E+K PGY V+V
Sbjct: 435 ITFQLRHILKARCDPVPAANGAIRFHCDPTFWAKNVVNLGNLVIESKPAPGYTPNVVVGQ 494
Query: 69 DP 70
P
Sbjct: 495 VP 496
>AL035410-3|CAI21897.1| 1110|Homo sapiens tripartite
motif-containing 33 protein.
Length = 1110
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 10 ILFDVRR-LSLRADPFASAQENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVST 68
I F +R L R DP +A I F+ ++ LV E+K PGY V+V
Sbjct: 435 ITFQLRHILKARCDPVPAANGAIRFHCDPTFWAKNVVNLGNLVIESKPAPGYTPNVVVGQ 494
Query: 69 DP 70
P
Sbjct: 495 VP 496
>AL035410-2|CAI21895.1| 887|Homo sapiens tripartite
motif-containing 33 protein.
Length = 887
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 10 ILFDVRR-LSLRADPFASAQENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVST 68
I F +R L R DP +A I F+ ++ LV E+K PGY V+V
Sbjct: 171 ITFQLRHILKARCDPVPAANGAIRFHCDPTFWAKNVVNLGNLVIESKPAPGYTPNVVVGQ 230
Query: 69 DP 70
P
Sbjct: 231 VP 232
>AF220137-1|AAG53510.1| 1110|Homo sapiens tripartite motif protein
TRIM33 beta protein.
Length = 1110
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 10 ILFDVRR-LSLRADPFASAQENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVST 68
I F +R L R DP +A I F+ ++ LV E+K PGY V+V
Sbjct: 435 ITFQLRHILKARCDPVPAANGAIRFHCDPTFWAKNVVNLGNLVIESKPAPGYTPNVVVGQ 494
Query: 69 DP 70
P
Sbjct: 495 VP 496
>AF220136-1|AAG53509.1| 1127|Homo sapiens tripartite motif protein
TRIM33 alpha protein.
Length = 1127
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 10 ILFDVRR-LSLRADPFASAQENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVST 68
I F +R L R DP +A I F+ ++ LV E+K PGY V+V
Sbjct: 435 ITFQLRHILKARCDPVPAANGAIRFHCDPTFWAKNVVNLGNLVIESKPAPGYTPNVVVGQ 494
Query: 69 DP 70
P
Sbjct: 495 VP 496
>AF119043-1|AAD17259.1| 1120|Homo sapiens transcriptional
intermediary factor 1 gamma protein.
Length = 1120
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 10 ILFDVRR-LSLRADPFASAQENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVST 68
I F +R L R DP +A I F+ ++ LV E+K PGY V+V
Sbjct: 435 ITFQLRHILKARCDPVPAANGAIRFHCDPTFWAKNVVNLGNLVIESKPAPGYTPNVVVGQ 494
Query: 69 DP 70
P
Sbjct: 495 VP 496
>AB029036-1|BAA83065.1| 1131|Homo sapiens KIAA1113 protein protein.
Length = 1131
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 10 ILFDVRR-LSLRADPFASAQENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVST 68
I F +R L R DP +A I F+ ++ LV E+K PGY V+V
Sbjct: 439 ITFQLRHILKARCDPVPAANGAIRFHCDPTFWAKNVVNLGNLVIESKPAPGYTPNVVVGQ 498
Query: 69 DP 70
P
Sbjct: 499 VP 500
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.323 0.140 0.447
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,087,358
Number of Sequences: 224733
Number of extensions: 407998
Number of successful extensions: 692
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 681
Number of HSP's gapped (non-prelim): 21
length of query: 74
length of database: 73,234,838
effective HSP length: 53
effective length of query: 21
effective length of database: 61,323,989
effective search space: 1287803769
effective search space used: 1287803769
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 57 (27.1 bits)
- SilkBase 1999-2023 -