Silkworm BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001321-TA|BGIBMGA001321-PA|undefined
         (236 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY084174-1|AAL89912.1|  249|Drosophila melanogaster RE42193p pro...   263   1e-70
AE014297-243|AAF52034.1|  249|Drosophila melanogaster CG1172-PA ...   263   1e-70
AY075440-1|AAL68254.1| 1017|Drosophila melanogaster RE02250p pro...    29   7.4  
AE014297-1849|AAF55053.2| 1017|Drosophila melanogaster CG31319-P...    29   7.4  
AE014297-2407|AAF55465.1| 1101|Drosophila melanogaster CG7397-PA...    28   9.7  

>AY084174-1|AAL89912.1|  249|Drosophila melanogaster RE42193p
           protein.
          Length = 249

 Score =  263 bits (645), Expect = 1e-70
 Identities = 122/193 (63%), Positives = 147/193 (76%), Gaps = 5/193 (2%)

Query: 1   MGGCIGITRSGSGHIEESSGTVSRPNSGGL-----RKNQSLCHETIRWKSDVPLTEGQLR 55
           MG C+      +  +  SS ++SRP S G+     RKN+ LCHETIRW+SDVPLTEGQLR
Sbjct: 1   MGACVCRMNPDNETMSVSSASISRPASAGIAMGAARKNRPLCHETIRWRSDVPLTEGQLR 60

Query: 56  SKRDEFWDTAPAFDGRKEIWDXXXXXXXXXXXMDFQLAQAILDGASVSVPNGYLTECYDE 115
           SKRDEFWDTAPAFDGRKEIWD           +DFQ+AQAILDGA+VSVPNGYLTECYDE
Sbjct: 61  SKRDEFWDTAPAFDGRKEIWDALRAATTAAEGLDFQMAQAILDGANVSVPNGYLTECYDE 120

Query: 116 WGTRYQVPIYCLSPPINMVKEASGRDSPAEWSEPAEGGAEVTLRLRLSSSCRDVELAVCS 175
            GT+Y+VPIYCLS PIN+VKE +GRDSPAE+SEP +GG ++ L+LR+SS+  DV+L V S
Sbjct: 121 LGTQYKVPIYCLSYPINIVKEENGRDSPAEYSEPVDGGTDIFLKLRISSTMTDVKLPVYS 180

Query: 176 RHTVAHCKNKLHS 188
           + TV  CK KL +
Sbjct: 181 KDTVGQCKKKLQA 193


>AE014297-243|AAF52034.1|  249|Drosophila melanogaster CG1172-PA
           protein.
          Length = 249

 Score =  263 bits (645), Expect = 1e-70
 Identities = 122/193 (63%), Positives = 147/193 (76%), Gaps = 5/193 (2%)

Query: 1   MGGCIGITRSGSGHIEESSGTVSRPNSGGL-----RKNQSLCHETIRWKSDVPLTEGQLR 55
           MG C+      +  +  SS ++SRP S G+     RKN+ LCHETIRW+SDVPLTEGQLR
Sbjct: 1   MGACVCRMNPDNETMSVSSASISRPASAGIAMGAARKNRPLCHETIRWRSDVPLTEGQLR 60

Query: 56  SKRDEFWDTAPAFDGRKEIWDXXXXXXXXXXXMDFQLAQAILDGASVSVPNGYLTECYDE 115
           SKRDEFWDTAPAFDGRKEIWD           +DFQ+AQAILDGA+VSVPNGYLTECYDE
Sbjct: 61  SKRDEFWDTAPAFDGRKEIWDALRAATTAAEGLDFQMAQAILDGANVSVPNGYLTECYDE 120

Query: 116 WGTRYQVPIYCLSPPINMVKEASGRDSPAEWSEPAEGGAEVTLRLRLSSSCRDVELAVCS 175
            GT+Y+VPIYCLS PIN+VKE +GRDSPAE+SEP +GG ++ L+LR+SS+  DV+L V S
Sbjct: 121 LGTQYKVPIYCLSYPINIVKEENGRDSPAEYSEPVDGGTDIFLKLRISSTMTDVKLPVYS 180

Query: 176 RHTVAHCKNKLHS 188
           + TV  CK KL +
Sbjct: 181 KDTVGQCKKKLQA 193


>AY075440-1|AAL68254.1| 1017|Drosophila melanogaster RE02250p
           protein.
          Length = 1017

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 123 PIYCLSPPINMVKEASGRDSPAEWSEPAEGGAEVTLRLRLSSSCR 167
           P++  S P++ +KE    DS + +S+  E      L LR  S  R
Sbjct: 331 PLHFFSSPMSQLKEGKSDDSSSYYSDSQESSTGGKLSLRKPSKAR 375


>AE014297-1849|AAF55053.2| 1017|Drosophila melanogaster CG31319-PA
           protein.
          Length = 1017

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 123 PIYCLSPPINMVKEASGRDSPAEWSEPAEGGAEVTLRLRLSSSCR 167
           P++  S P++ +KE    DS + +S+  E      L LR  S  R
Sbjct: 331 PLHFFSSPMSQLKEGKSDDSSSYYSDSQESSTGGKLSLRKPSKAR 375


>AE014297-2407|AAF55465.1| 1101|Drosophila melanogaster CG7397-PA
           protein.
          Length = 1101

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 4/61 (6%)

Query: 135 KEASGRDSPAEWSEPAE----GGAEVTLRLRLSSSCRDVELAVCSRHTVAHCKNKLHSLV 190
           K+ +   +P    EPA+    GG++  L L LSSS  + E A  S +      + L   V
Sbjct: 700 KKLTPTPTPVAGGEPADAATTGGSDTQLELNLSSSDDETEAAAASLNVAGSTGSTLVERV 759

Query: 191 P 191
           P
Sbjct: 760 P 760


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.319    0.135    0.439 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,502,617
Number of Sequences: 52641
Number of extensions: 515116
Number of successful extensions: 1159
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1152
Number of HSP's gapped (non-prelim): 6
length of query: 236
length of database: 24,830,863
effective HSP length: 83
effective length of query: 153
effective length of database: 20,461,660
effective search space: 3130633980
effective search space used: 3130633980
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)