GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001321-TA|BGIBMGA001321-PA|undefined
         (236 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   3.4  
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    23   5.9  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   5.9  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 13/28 (46%), Positives = 16/28 (57%)

Query: 8    TRSGSGHIEESSGTVSRPNSGGLRKNQS 35
            +RSGSG     S + SR  S G RK+ S
Sbjct: 1119 SRSGSGGSRSRSRSRSRSQSAGSRKSGS 1146


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 3/43 (6%)

Query: 88  MDFQLAQA---ILDGASVSVPNGYLTECYDEWGTRYQVPIYCL 127
           +  Q+AQA   I+ G    V  G+L +   E G  Y VPI  L
Sbjct: 357 LGLQIAQAPVCIIGGLGFGVVWGFLCKYVPEPGDAYVVPIRTL 399


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 3/38 (7%)

Query: 136  EASGRDSPAEWSEPAEGGAEVTLRLRLSSSCRDVELAV 173
            EA    SP  WS   E    +T +L+    C D E A+
Sbjct: 993  EAHMLQSPTNWSNVCEAAKRITSKLQ---RCWDDECAI 1027


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.135    0.439 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 265,614
Number of Sequences: 2123
Number of extensions: 11397
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 3
length of query: 236
length of database: 516,269
effective HSP length: 62
effective length of query: 174
effective length of database: 384,643
effective search space: 66927882
effective search space used: 66927882
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 47 (23.0 bits)