Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001321-TA|BGIBMGA001321-PA|undefined
(236 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC007331-1|AAH07331.1| 227|Homo sapiens ubiquitin domain contai... 175 8e-44
AL359388-3|CAI14191.1| 227|Homo sapiens ubiquitin domain contai... 175 8e-44
AK021869-1|BAB13921.1| 227|Homo sapiens protein ( Homo sapiens ... 175 8e-44
AK222597-1|BAD96317.1| 227|Homo sapiens ubiquitin domain contai... 173 3e-43
BC019910-1|AAH19910.1| 190|Homo sapiens UBTD2 protein protein. 169 7e-42
AF251700-1|AAL99389.1| 106|Homo sapiens ubiquitin-like protein ... 40 0.008
AK058072-1|BAB71650.2| 633|Homo sapiens protein ( Homo sapiens ... 30 6.1
AB051516-1|BAB21820.1| 1020|Homo sapiens KIAA1729 protein protein. 30 6.1
U24497-1|AAC50128.1| 4303|Homo sapiens autosomal dominant polycy... 30 8.1
L43619-1|AAC41765.1| 4292|Homo sapiens polycystic kidney disease... 30 8.1
L39891-1|AAB59488.1| 3638|Homo sapiens polycystic kidney disease... 30 8.1
L33243-1|AAC37576.1| 4302|Homo sapiens polycystic kidney disease... 30 8.1
AY210418-1|AAO34701.1| 3487|Homo sapiens CUB and sushi multiple ... 30 8.1
AC005600-4|AAC34211.1| 1339|Homo sapiens PKD1 protein. 30 8.1
AB212622-1|BAD97692.1| 3631|Homo sapiens CSMD2 protein protein. 30 8.1
>BC007331-1|AAH07331.1| 227|Homo sapiens ubiquitin domain
containing 1 protein.
Length = 227
Score = 175 bits (427), Expect = 8e-44
Identities = 89/188 (47%), Positives = 114/188 (60%), Gaps = 8/188 (4%)
Query: 1 MGGCIGITRSGSGHIEESSGTVSRPNSGGLRKNQSLCHETIRWKSDVPLTEGQLRSKRDE 60
MG C+G R E P R N+ L E ++WKSD P+T+GQLRSKRDE
Sbjct: 1 MGNCVGRQR------RERPAAPGHPRKRAGR-NEPLKKERLKWKSDYPMTDGQLRSKRDE 53
Query: 61 FWDTAPAFDGRKEIWDXXXXXXXXXXXMDFQLAQAILDGASVSVPNGYLTECYDEWGTRY 120
FWDTAPAF+GRKEIWD D +LAQAILDGAS+++P+G L ECYDE G RY
Sbjct: 54 FWDTAPAFEGRKEIWDALKAAAYAAEANDHELAQAILDGASITLPHGTLCECYDELGNRY 113
Query: 121 QVPIYCLSPPINMVKEASGRDSPAEWSEPAEGGAEVTLRLRLSSSCRDVELAVCSRHTVA 180
Q+PIYCLSPP+N++ E + +S P E L++RLS+ +DV L+ TV
Sbjct: 114 QLPIYCLSPPVNLLLEHTEEESLEPPEPPPSVRREFPLKVRLSTG-KDVRLSASLPDTVG 172
Query: 181 HCKNKLHS 188
K +LH+
Sbjct: 173 QLKRQLHA 180
>AL359388-3|CAI14191.1| 227|Homo sapiens ubiquitin domain
containing 1 protein.
Length = 227
Score = 175 bits (427), Expect = 8e-44
Identities = 89/188 (47%), Positives = 114/188 (60%), Gaps = 8/188 (4%)
Query: 1 MGGCIGITRSGSGHIEESSGTVSRPNSGGLRKNQSLCHETIRWKSDVPLTEGQLRSKRDE 60
MG C+G R E P R N+ L E ++WKSD P+T+GQLRSKRDE
Sbjct: 1 MGNCVGRQR------RERPAAPGHPRKRAGR-NEPLKKERLKWKSDYPMTDGQLRSKRDE 53
Query: 61 FWDTAPAFDGRKEIWDXXXXXXXXXXXMDFQLAQAILDGASVSVPNGYLTECYDEWGTRY 120
FWDTAPAF+GRKEIWD D +LAQAILDGAS+++P+G L ECYDE G RY
Sbjct: 54 FWDTAPAFEGRKEIWDALKAAAYAAEANDHELAQAILDGASITLPHGTLCECYDELGNRY 113
Query: 121 QVPIYCLSPPINMVKEASGRDSPAEWSEPAEGGAEVTLRLRLSSSCRDVELAVCSRHTVA 180
Q+PIYCLSPP+N++ E + +S P E L++RLS+ +DV L+ TV
Sbjct: 114 QLPIYCLSPPVNLLLEHTEEESLEPPEPPPSVRREFPLKVRLSTG-KDVRLSASLPDTVG 172
Query: 181 HCKNKLHS 188
K +LH+
Sbjct: 173 QLKRQLHA 180
>AK021869-1|BAB13921.1| 227|Homo sapiens protein ( Homo sapiens
cDNA FLJ11807 fis, clone HEMBA1006284. ).
Length = 227
Score = 175 bits (427), Expect = 8e-44
Identities = 89/188 (47%), Positives = 114/188 (60%), Gaps = 8/188 (4%)
Query: 1 MGGCIGITRSGSGHIEESSGTVSRPNSGGLRKNQSLCHETIRWKSDVPLTEGQLRSKRDE 60
MG C+G R E P R N+ L E ++WKSD P+T+GQLRSKRDE
Sbjct: 1 MGNCVGRQR------RERPAAPGHPRKRAGR-NEPLKKERLKWKSDYPMTDGQLRSKRDE 53
Query: 61 FWDTAPAFDGRKEIWDXXXXXXXXXXXMDFQLAQAILDGASVSVPNGYLTECYDEWGTRY 120
FWDTAPAF+GRKEIWD D +LAQAILDGAS+++P+G L ECYDE G RY
Sbjct: 54 FWDTAPAFEGRKEIWDALKAAAYAAEANDHELAQAILDGASITLPHGTLCECYDELGNRY 113
Query: 121 QVPIYCLSPPINMVKEASGRDSPAEWSEPAEGGAEVTLRLRLSSSCRDVELAVCSRHTVA 180
Q+PIYCLSPP+N++ E + +S P E L++RLS+ +DV L+ TV
Sbjct: 114 QLPIYCLSPPVNLLLEHTEEESLEPPEPPPSVRREFPLKVRLSTG-KDVRLSASLPDTVG 172
Query: 181 HCKNKLHS 188
K +LH+
Sbjct: 173 QLKRQLHA 180
>AK222597-1|BAD96317.1| 227|Homo sapiens ubiquitin domain
containing 1 variant protein.
Length = 227
Score = 173 bits (422), Expect = 3e-43
Identities = 89/188 (47%), Positives = 114/188 (60%), Gaps = 8/188 (4%)
Query: 1 MGGCIGITRSGSGHIEESSGTVSRPNSGGLRKNQSLCHETIRWKSDVPLTEGQLRSKRDE 60
MG C+G R E P R N+ L E ++WKSD P+T+GQLRSKRDE
Sbjct: 1 MGNCVGRQR------RERPAAPGHPRKRAGR-NEPLKKERLKWKSDYPMTDGQLRSKRDE 53
Query: 61 FWDTAPAFDGRKEIWDXXXXXXXXXXXMDFQLAQAILDGASVSVPNGYLTECYDEWGTRY 120
FWDTAPAF+GRKEIWD D +LAQAILDGAS+++P+G L ECYDE G RY
Sbjct: 54 FWDTAPAFEGRKEIWDALKAAAYAAEANDHELAQAILDGASITLPHGTLCECYDELGNRY 113
Query: 121 QVPIYCLSPPINMVKEASGRDSPAEWSEPAEGGAEVTLRLRLSSSCRDVELAVCSRHTVA 180
Q+PIYCLSPP+N++ E + +S P E L++RLS+ +DV L+ TV
Sbjct: 114 QLPIYCLSPPVNLLLEHTEGESLEPPEPPPSVRREFPLKVRLSTG-KDVRLSASLPDTVG 172
Query: 181 HCKNKLHS 188
K +LH+
Sbjct: 173 LLKRQLHA 180
>BC019910-1|AAH19910.1| 190|Homo sapiens UBTD2 protein protein.
Length = 190
Score = 169 bits (411), Expect = 7e-42
Identities = 79/151 (52%), Positives = 103/151 (68%), Gaps = 1/151 (0%)
Query: 49 LTEGQLRSKRDEFWDTAPAFDGRKEIWDXXXXXXXXXXXMDFQLAQAILDGASVSVPNGY 108
+T+GQLRSKRDEFWDTAPAF+GRKEIWD D +LAQAI+DGA++++P+G
Sbjct: 1 MTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGA 60
Query: 109 LTECYDEWGTRYQVPIYCLSPPINMVKEASGRDSPAEWSEPAEGGAEVTLRLRLSSSCRD 168
LTECYDE G RYQ+P+YCL+PPINM++E S ++ P G E LRLRLS+ +D
Sbjct: 61 LTECYDELGNRYQLPVYCLAPPINMIEEKSDIETLDIPEPPPNSGYECQLRLRLSTG-KD 119
Query: 169 VELAVCSRHTVAHCKNKLHSLVPIAWGILNW 199
++L V S TV H K +LH+ + G W
Sbjct: 120 LKLVVRSTDTVFHMKRRLHAAEGVEPGSQRW 150
>AF251700-1|AAL99389.1| 106|Homo sapiens ubiquitin-like protein
SB72 protein.
Length = 106
Score = 39.9 bits (89), Expect = 0.008
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 133 MVKEASGRDSPAEWSEPAEGGAEVTLRLRLSSSCRDVELAVCSRHTVAHCKNKLHSLVPI 192
M++E S ++ P G E LRLRLS+ +D++L V S TV H K +LH+ +
Sbjct: 1 MIEEKSDIETLDIPEPPPNSGYECQLRLRLSTG-KDLKLVVRSTDTVFHMKRRLHAAEGV 59
Query: 193 AWGILNW 199
G W
Sbjct: 60 EPGSQRW 66
>AK058072-1|BAB71650.2| 633|Homo sapiens protein ( Homo sapiens
cDNA FLJ25343 fis, clone TST01040. ).
Length = 633
Score = 30.3 bits (65), Expect = 6.1
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Query: 5 IGITRSGSGHIEESSGTVSRP-NSGGLRKNQSLCHETI 41
I ++ +G GH S+GT+ +P N GG+ N+ L H+ I
Sbjct: 269 INVSLTGLGH---STGTLQKPPNDGGITGNRQLTHQQI 303
>AB051516-1|BAB21820.1| 1020|Homo sapiens KIAA1729 protein protein.
Length = 1020
Score = 30.3 bits (65), Expect = 6.1
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Query: 5 IGITRSGSGHIEESSGTVSRP-NSGGLRKNQSLCHETI 41
I ++ +G GH S+GT+ +P N GG+ N+ L H+ I
Sbjct: 656 INVSLTGLGH---STGTLQKPPNDGGITGNRQLTHQQI 690
>U24497-1|AAC50128.1| 4303|Homo sapiens autosomal dominant polycystic
kidney disease protein 1 protein.
Length = 4303
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 124 IYCLSPPINMVKEASGRDSPAEWSEPAEGGAEVTLRLRLSSSCRDVELAVCSRHTVAHCK 183
+Y L ++ ++ +PA S G L RL+ + R V+LA T K
Sbjct: 4236 VYQLEQQLHSLQGRRSSRAPAGSSRGPSPGLRPALPSRLARASRGVDLATGPSRTPLRAK 4295
Query: 184 NKLH 187
NK+H
Sbjct: 4296 NKVH 4299
>L43619-1|AAC41765.1| 4292|Homo sapiens polycystic kidney disease 1
protein protein.
Length = 4292
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 124 IYCLSPPINMVKEASGRDSPAEWSEPAEGGAEVTLRLRLSSSCRDVELAVCSRHTVAHCK 183
+Y L ++ ++ +PA S G L RL+ + R V+LA T K
Sbjct: 4225 VYQLEQQLHSLQGRRSSRAPAGSSRGPSPGLRPALPSRLARASRGVDLATGPSRTPLRAK 4284
Query: 184 NKLH 187
NK+H
Sbjct: 4285 NKVH 4288
>L39891-1|AAB59488.1| 3638|Homo sapiens polycystic kidney
disease-associated protein protein.
Length = 3638
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 124 IYCLSPPINMVKEASGRDSPAEWSEPAEGGAEVTLRLRLSSSCRDVELAVCSRHTVAHCK 183
+Y L ++ ++ +PA S G L RL+ + R V+LA T K
Sbjct: 3571 VYQLEQQLHSLQGRRSSRAPAGSSRGPSPGLRPALPSRLARASRGVDLATGPSRTPLRAK 3630
Query: 184 NKLH 187
NK+H
Sbjct: 3631 NKVH 3634
>L33243-1|AAC37576.1| 4302|Homo sapiens polycystic kidney disease 1
protein protein.
Length = 4302
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 124 IYCLSPPINMVKEASGRDSPAEWSEPAEGGAEVTLRLRLSSSCRDVELAVCSRHTVAHCK 183
+Y L ++ ++ +PA S G L RL+ + R V+LA T K
Sbjct: 4235 VYQLEQQLHSLQGRRSSRAPAGSSRGPSPGLRPALPSRLARASRGVDLATGPSRTPLRAK 4294
Query: 184 NKLH 187
NK+H
Sbjct: 4295 NKVH 4298
>AY210418-1|AAO34701.1| 3487|Homo sapiens CUB and sushi multiple
domains 2 protein.
Length = 3487
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/59 (30%), Positives = 25/59 (42%)
Query: 13 GHIEESSGTVSRPNSGGLRKNQSLCHETIRWKSDVPLTEGQLRSKRDEFWDTAPAFDGR 71
GH+ SGT+ P G K+ C I + P+ R K + +DT DGR
Sbjct: 754 GHLTSPSGTILSPGWPGFYKDALSCAWVIEAQPGYPIKITFDRFKTEVNYDTLEVRDGR 812
>AC005600-4|AAC34211.1| 1339|Homo sapiens PKD1 protein.
Length = 1339
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 124 IYCLSPPINMVKEASGRDSPAEWSEPAEGGAEVTLRLRLSSSCRDVELAVCSRHTVAHCK 183
+Y L ++ ++ +PA S G L RL+ + R V+LA T K
Sbjct: 1272 VYQLEQQLHSLQGRRSSRAPAGSSRGPSPGLRPALPSRLARASRGVDLATGPSRTPLRAK 1331
Query: 184 NKLH 187
NK+H
Sbjct: 1332 NKVH 1335
>AB212622-1|BAD97692.1| 3631|Homo sapiens CSMD2 protein protein.
Length = 3631
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/59 (30%), Positives = 25/59 (42%)
Query: 13 GHIEESSGTVSRPNSGGLRKNQSLCHETIRWKSDVPLTEGQLRSKRDEFWDTAPAFDGR 71
GH+ SGT+ P G K+ C I + P+ R K + +DT DGR
Sbjct: 794 GHLTSPSGTILSPGWPGFYKDALSCAWVIEAQPGYPIKITFDRFKTEVNYDTLEVRDGR 852
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.319 0.135 0.439
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,369,539
Number of Sequences: 224733
Number of extensions: 1580029
Number of successful extensions: 2688
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2674
Number of HSP's gapped (non-prelim): 15
length of query: 236
length of database: 73,234,838
effective HSP length: 88
effective length of query: 148
effective length of database: 53,458,334
effective search space: 7911833432
effective search space used: 7911833432
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 64 (29.9 bits)
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