GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001321-TA|BGIBMGA001321-PA|undefined
         (236 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.4  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   7.5  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   7.5  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query: 48  PLTEGQLRSKRDEFWDTAPAFDG 70
           P+T+G LR K++E    AP+  G
Sbjct: 350 PVTQGLLRVKKEEELQEAPSCGG 372



 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)

Query: 166 CRDVELAVCSRHTVA 180
           CR+VE A  +R+ VA
Sbjct: 391 CREVEAAATARNVVA 405


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 12/47 (25%), Positives = 22/47 (46%)

Query: 137 ASGRDSPAEWSEPAEGGAEVTLRLRLSSSCRDVELAVCSRHTVAHCK 183
           ASG+       E  +G  + T+R  LS +CR+ +  +  +     C+
Sbjct: 117 ASGKHYGVYSCEGCKGFFKRTVRKDLSYACREEKSCIIDKRQRNRCQ 163


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 12/47 (25%), Positives = 22/47 (46%)

Query: 137 ASGRDSPAEWSEPAEGGAEVTLRLRLSSSCRDVELAVCSRHTVAHCK 183
           ASG+       E  +G  + T+R  LS +CR+ +  +  +     C+
Sbjct: 117 ASGKHYGVYSCEGCKGFFKRTVRKDLSYACREEKSCIIDKRQRNRCQ 163


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.135    0.439 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,886
Number of Sequences: 429
Number of extensions: 2472
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 4
length of query: 236
length of database: 140,377
effective HSP length: 56
effective length of query: 180
effective length of database: 116,353
effective search space: 20943540
effective search space used: 20943540
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 42 (21.0 bits)