Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001318-TA|BGIBMGA001318-PA|IPR002048|Calcium-binding
EF-hand
         (72 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    20   2.2  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    20   3.0  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    20   3.0  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    19   6.8  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    19   6.8  

>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative
          cytochrome P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 20.2 bits (40), Expect = 2.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 36 ELGTVMRSLGQNPTEAELQDM 56
          E+ TV+  L + PT   LQ+M
Sbjct: 42 EMVTVLGDLHRKPTYNNLQEM 62


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 19.8 bits (39), Expect = 3.0
 Identities = 7/22 (31%), Positives = 14/22 (63%)

Query: 35  KELGTVMRSLGQNPTEAELQDM 56
           +E+  V+  + + PT  +LQ+M
Sbjct: 340 EEMNEVLGDIKKKPTYQDLQEM 361


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 19.8 bits (39), Expect = 3.0
 Identities = 7/22 (31%), Positives = 14/22 (63%)

Query: 35  KELGTVMRSLGQNPTEAELQDM 56
           +E+  V+  + + PT  +LQ+M
Sbjct: 340 EEMNEVLGDIKKKPTYQDLQEM 361


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory
          receptor candidate 56 protein.
          Length = 358

 Score = 18.6 bits (36), Expect = 6.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)

Query: 55 DMINEVDADAYEKWRY 70
          D+I+  D+D  +K RY
Sbjct: 75 DLISFKDSDLQQKLRY 90


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory
          receptor candidate 21 protein.
          Length = 386

 Score = 18.6 bits (36), Expect = 6.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)

Query: 55 DMINEVDADAYEKWRY 70
          D+I+  D+D  +K RY
Sbjct: 75 DLISFKDSDLQQKLRY 90


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.314    0.130    0.357 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,473
Number of Sequences: 317
Number of extensions: 381
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 72
length of database: 114,650
effective HSP length: 45
effective length of query: 27
effective length of database: 100,385
effective search space:  2710395
effective search space used:  2710395
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.8 bits)
S2: 35 (18.2 bits)