GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001318-TA|BGIBMGA001318-PA|IPR002048|Calcium-binding
EF-hand
         (72 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1 pro...    36   1e-04
AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7...    21   3.2  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    21   4.3  
AY255856-1|AAP13482.1|  248|Anopheles gambiae glutathione transf...    21   4.3  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    21   4.3  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    20   7.4  
AF164151-1|AAD47075.1|  148|Anopheles gambiae translation initia...    20   7.4  

>AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1
          protein protein.
          Length = 160

 Score = 35.9 bits (79), Expect = 1e-04
 Identities = 15/44 (34%), Positives = 27/44 (61%)

Query: 6  ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT 49
          A+ L + +I + +  FS++D +G G +   +LG  +R+L  NPT
Sbjct: 2  ANDLKDVEIEKAQFVFSVYDWEGSGQMDAMDLGNALRALNLNPT 45



 Score = 33.1 bits (72), Expect = 0.001
 Identities = 14/44 (31%), Positives = 26/44 (59%)

Query: 16  EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE 59
           +F E   L+DK+ DGT+   EL   + +LG+   + EL +++ +
Sbjct: 86  DFLECLKLYDKNEDGTMLLAELTHSLTALGERLDDVELDNVMKD 129


>AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7
           protein.
          Length = 696

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 7/15 (46%), Positives = 14/15 (93%)

Query: 5   AADQLTEEQIAEFKE 19
           A+D++TE+++A F+E
Sbjct: 200 ASDRVTEQRLAYFRE 214


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 10/29 (34%), Positives = 17/29 (58%)

Query: 6   ADQLTEEQIAEFKEAFSLFDKDGDGTITT 34
           +DQLT +  A+ +   +  D D + T+TT
Sbjct: 768 SDQLTGDNSADERAVPNDADDDDESTMTT 796


>AY255856-1|AAP13482.1|  248|Anopheles gambiae glutathione
           transferase o1 protein.
          Length = 248

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 8/26 (30%), Positives = 14/26 (53%)

Query: 2   VVMAADQLTEEQIAEFKEAFSLFDKD 27
           ++ AAD +    I EF     +F+K+
Sbjct: 133 ILFAADGIPPGAITEFGAGLDIFEKE 158


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 10/31 (32%), Positives = 18/31 (58%)

Query: 22  SLFDKDGDGTITTKELGTVMRSLGQNPTEAE 52
           SL+     G +  + +  V+RSLG + +EA+
Sbjct: 576 SLYGLKQAGRVWNQTITEVLRSLGFHSSEAD 606


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/11 (63%), Positives = 10/11 (90%)

Query: 10  TEEQIAEFKEA 20
           T++Q+AEFK A
Sbjct: 168 TDQQLAEFKRA 178


>AF164151-1|AAD47075.1|  148|Anopheles gambiae translation
          initiation factor 4C (1A) protein.
          Length = 148

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 35 KELGTVMRSLGQNPTEAELQDMINEVDADAY 65
          K  G   R  G+N  E+E +++I + D   Y
Sbjct: 5  KGKGGKNRRRGKNENESEKRELIFKEDEQEY 35


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.314    0.130    0.357 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,472
Number of Sequences: 2123
Number of extensions: 1978
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 72
length of database: 516,269
effective HSP length: 50
effective length of query: 22
effective length of database: 410,119
effective search space:  9022618
effective search space used:  9022618
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.6 bits)
S2: 39 (19.8 bits)