Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001317-TA|BGIBMGA001317-PA|undefined
(285 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 35 0.015
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 35 0.015
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 31 0.19
SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces po... 31 0.19
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 31 0.25
SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces po... 29 0.58
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 29 0.58
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 29 0.76
SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr 1|||Ma... 29 1.0
SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr 1|||... 28 1.3
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 28 1.8
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 28 1.8
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 27 2.3
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 27 2.3
SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|ch... 27 3.1
SPBC3B9.19 |mge1||GrpE domain chaperone protein|Schizosaccharomy... 27 3.1
SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces pomb... 27 3.1
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 27 4.1
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 27 4.1
SPBC1539.05 |cog3||Golgi transport complex subunit Cog3 |Schizos... 27 4.1
SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 4.1
SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces ... 26 5.4
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 26 5.4
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 26 7.1
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 25 9.4
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 25 9.4
SPAC31A2.16 |gef2||RhoGEF Gef2|Schizosaccharomyces pombe|chr 1||... 25 9.4
SPBC691.02c |||RINT1 family protein|Schizosaccharomyces pombe|ch... 25 9.4
SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 25 9.4
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 34.7 bits (76), Expect = 0.015
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Query: 16 NDPCLGCCRCKAKYDLVCANVASFDYELMDAKHKASWKCPECCSKEPKTGNINTPVRSTP 75
+D + C C + C ++S + +++ CP+CCSKE K NT RSTP
Sbjct: 1466 SDGTVQCHNCLEWFHYECVGLSSDIVSTL-----SNYACPDCCSKEGKLYPWNTRPRSTP 1520
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 34.7 bits (76), Expect = 0.015
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 191 LDKIDGFRDSLEFMSTKYEEMKSKFESETSTITELKCDNERLKTTIRDLTARLNAPL 247
+ ++GFR+ +E + +YE S+ + + +L+ D E LK D +LN+ +
Sbjct: 83 IQDLEGFREFMENLEHRYEMTVSEVRRLSHEVNDLQTDRENLKHQFEDQIEKLNSEI 139
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 31.1 bits (67), Expect = 0.19
Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 6 ECSGCRNVLDNDPCLGCC-RCKAKYDLVCANVASFDYELMDAKHKASWKCPECCSKEPKT 64
ECS C + ++ + C C + L C + + ++ +++ +W+CP C S + +T
Sbjct: 196 ECSVCTDTINPSTSIWSCGTCYHVFHLSC--IRKWCKNSIEQRNEDAWRCPYCQSNQTET 253
>SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1076
Score = 31.1 bits (67), Expect = 0.19
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 158 VTENR---LRGILQQEISTALNTTIKKIVVTEFKNVLDKIDGFRDSLEFMSTKYEEMKSK 214
+TEN L ++++ + AL I V KN L+KI+ F ++ ++ ++
Sbjct: 773 LTENTGKILESVVEKSMQVALKEEIANSVRNALKNNLEKIESFLEN--SIAELQNSVRED 830
Query: 215 FESETSTITELK 226
F+ +TS++ +L+
Sbjct: 831 FDKQTSSLAQLR 842
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 30.7 bits (66), Expect = 0.25
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 202 EFMSTKYEEMKSKFESETSTITELKCDNERLKTTIRDLTARL 243
E + Y++++S FE ++S I L+ +NE L++ I ++ L
Sbjct: 698 EKLCVDYDKLRSVFEEDSSKILSLQKENENLQSQILQISEEL 739
>SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 742
Score = 29.5 bits (63), Expect = 0.58
Identities = 18/69 (26%), Positives = 28/69 (40%)
Query: 29 YDLVCANVASFDYELMDAKHKASWKCPECCSKEPKTGNINTPVRSTPYSDTKSQEEDVQG 88
Y ++ A+ YE D K +W PE + NIN S+T ++V
Sbjct: 407 YSIISTAAANGVYEYFDKSMKKNWAGPEHWRIQALRKNINNASTVFNSSNTAESSDNVSR 466
Query: 89 QSNVTVRKR 97
+ T RK+
Sbjct: 467 SLSSTERKK 475
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 29.5 bits (63), Expect = 0.58
Identities = 20/105 (19%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Query: 160 ENRLRGILQQEISTALNTTIKKI---VVTEFKNVLDKIDGFRDSLEFMSTKYEEMKSKFE 216
+N+ + +L ++ T+ TT K+ + + + I+ +++ +++ T+Y+EM+++ +
Sbjct: 369 KNQKQSLLDKQSRTSQFTTKKERDEWIRNQLLQINRNINSTKENSDYLKTEYDEMENELK 428
Query: 217 SETSTITE----LKCDNERLKTTIRDLTARLNAPLRRIIDEYHSL 257
++ S E L+ +R+ + ++T+ +N + D+ SL
Sbjct: 429 AKLSRKKEIEISLESQGDRMSQLLANITS-INERKENLTDKRKSL 472
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 29.1 bits (62), Expect = 0.76
Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 183 VVTEFKNVLDKIDGFRDSLEFMSTKYEEMKSKFESETSTITELKCDNERLKTTIRDLTAR 242
V+TE + +KI+ + L E+++S+ ++E + + +L+ NE K +++
Sbjct: 1252 VITELR---EKIETLKTDLANFRLNKEQLESQLQTEKAAVKKLENSNEEYKRHNQEILLS 1308
Query: 243 LNA 245
LN+
Sbjct: 1309 LNS 1311
Score = 27.5 bits (58), Expect = 2.3
Identities = 17/79 (21%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 173 TALNTTIKKIVVTEFKNVLDKIDG------FRDSLEFMSTKYEEMKSKFESETSTITELK 226
+A+ T +K I + + VL +++ + F+ + + ++ E + I+ L+
Sbjct: 38 SAIKTKVKDINALKDQLVLQEVNHEHKENVLTKKINFLEQQLQSSNNQAEESRNLISVLR 97
Query: 227 CDNERLKTTIRDLTARLNA 245
+NE LKT + + R +A
Sbjct: 98 NENESLKTNLENQNKRFDA 116
>SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 899
Score = 28.7 bits (61), Expect = 1.0
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 167 LQQEISTALNTT-IKKIVVTEFKNVLDKIDGFRDSLEFMSTKYEEMKSKFESETSTITEL 225
L++ +S+ N + V + L KI +++ + + T+Y E++ KF + + EL
Sbjct: 786 LEKRLSSEANAPELHNPVNLNYDAQLSKISEIKENYDELLTRYRELEGKFLESQAEVEEL 845
Query: 226 K 226
K
Sbjct: 846 K 846
>SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 710
Score = 28.3 bits (60), Expect = 1.3
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 61 EPKTGNINTPVRSTPYSDTKSQEEDVQGQ--SNVTVRK 96
EPKTG P ++ Y + K + +++ GQ N+ ++K
Sbjct: 530 EPKTGENKEPSQTNEYVNCKQENKELSGQLSGNLDIKK 567
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 27.9 bits (59), Expect = 1.8
Identities = 17/83 (20%), Positives = 35/83 (42%)
Query: 175 LNTTIKKIVVTEFKNVLDKIDGFRDSLEFMSTKYEEMKSKFESETSTITELKCDNERLKT 234
L T V E + + I+ + + K E+ SK S+ + EL+ + E+L+
Sbjct: 863 LKLTKLNFQVNELEQLEKDINKSSEDCDLQKKKLLEVSSKQGSQAPFLNELESEYEKLEA 922
Query: 235 TIRDLTARLNAPLRRIIDEYHSL 257
I+++ + + + H L
Sbjct: 923 DIQEMAQKSRTEILEANEYLHQL 945
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.9 bits (59), Expect = 1.8
Identities = 16/88 (18%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 199 DSLEFMSTKYEEMKSKFESETSTITELKCDN---ERLKTTIRDLTARLNAPLRRIIDEYH 255
+S + + ++ + + + +S + +L+ + E+ ++T+ D L L ++ +
Sbjct: 616 ESHQELENNHQTITKQLKDTSSKLQQLQLERANFEQKESTLSDENNDLRTKLLKLEESNK 675
Query: 256 SLITVMPDLDVFHDKLRVFKDRIGKDEK 283
SLI D+D ++ K+ + K E+
Sbjct: 676 SLIKKQEDVDSLEKNIQTLKEDLRKSEE 703
Score = 25.4 bits (53), Expect = 9.4
Identities = 17/95 (17%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 161 NRLRGILQQEISTALNTTIKKIVVTEFKNVLDKIDGFRDSLEFMSTKYEEMKSKFESETS 220
NRL +++ +S + N + ++ ++ V D++D + + +ST+Y E+ +
Sbjct: 1179 NRLSD-MKKSLSDSDN--VISVIRSDLVRVNDELDTLKKDKDSLSTQYSEVCQDRDDLLD 1235
Query: 221 TITELKCDNERLKTTIRDLTAR--LNAPLRRIIDE 253
++ + + ++R+L + ++ P+ I+D+
Sbjct: 1236 SLKGCEESFNKYAVSLRELCTKSEIDVPVSEILDD 1270
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 27.5 bits (58), Expect = 2.3
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 181 KIVVTEFKNVLDKIDGFRDSLEFMSTKYEEMKSKFESETSTITELKCDNERLKTTIRDLT 240
K ++T F+N G R + TK+ + K+K SETS E K DN ++ + LT
Sbjct: 584 KDLLTAFENYKVSPKGRRKKI----TKHTKKKNKHASETSVAPE-KVDNSSIEQSSSFLT 638
Query: 241 ARLNAP---LRRIIDEYHSLITVM 261
P + ++ H L+ VM
Sbjct: 639 KLYTFPFTIITWLMHPTHLLLVVM 662
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/67 (20%), Positives = 34/67 (50%)
Query: 186 EFKNVLDKIDGFRDSLEFMSTKYEEMKSKFESETSTITELKCDNERLKTTIRDLTARLNA 245
E ++ +I+ + L + E +KS + +++ + +L+ N L++TI+ L +
Sbjct: 368 ENNSLKQQIEQLQRELASETVVKENLKSSLDQQSANVQKLESTNRALESTIKTLEEDVYT 427
Query: 246 PLRRIID 252
+II+
Sbjct: 428 MKNKIIE 434
>SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 870
Score = 27.1 bits (57), Expect = 3.1
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 179 IKKIVVTEFKNVLDKIDGFRDSLEFMSTKYEEMKSKFESETST 221
++KI T+ KNV K F ++ T SK E ETS+
Sbjct: 346 LRKIYDTDIKNVSTKKKDFEETSRDYYTSLSRYLSKSEKETSS 388
>SPBC3B9.19 |mge1||GrpE domain chaperone protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 223
Score = 27.1 bits (57), Expect = 3.1
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 204 MSTKYEEMKSKFESETSTITELKCDNERLKTTIRDLTARLNAPLRR 249
+ +K E+KSK+E++ + ELK + R+L R+ + +
Sbjct: 56 LQSKLSELKSKYEAKDKEVAELKGSIRQSLADYRNLENRMKRDMEQ 101
>SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 990
Score = 27.1 bits (57), Expect = 3.1
Identities = 24/107 (22%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Query: 166 ILQQEISTALNTTIKKIVVTEFKNVLDKIDGFRDSLEFMSTKYEEMKSKFESETSTITEL 225
I + I ++ +I + T ++L +IDGF +E ++ K + S E S++ +
Sbjct: 562 ISETSIQMTVSRSIHTLCTTCASHLLTEIDGFMAVVEELTPKLVYVPSVLEKIYSSVGYV 621
Query: 226 KCDNERLKTTIRDLTARLNAPLRRIIDEYHSLITVMPDLDVFHDKLR 272
E ++ I L LN L ++ ++ P+L++F + L+
Sbjct: 622 TQRIEDIELRISYLMRLLNCILAQLQP------SLYPNLEIFENVLK 662
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 26.6 bits (56), Expect = 4.1
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 7/97 (7%)
Query: 160 ENRLRGILQQEISTALNTTIKKIVVTEFKNVLDKIDGFRDSLEFMSTKYEEMKSKFESET 219
E R + L QE+ + L + K V KN +++ +E + E ++ +
Sbjct: 393 ERREKEALLQELES-LRVQLSKKVPMPAKNTDERV------IETLQRSNELLRMDISMQN 445
Query: 220 STITELKCDNERLKTTIRDLTARLNAPLRRIIDEYHS 256
+ K +N+RL + +LT LN+ I E S
Sbjct: 446 EALLLRKQENDRLVKQVEELTVALNSGKMNAIVEAES 482
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 26.6 bits (56), Expect = 4.1
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 191 LDKIDGFRDSLEFMSTKYEEMKSKFESETSTITELKCDNERLKTTIRD 238
L+K +SL + +K +++++ T + + D E K TIR+
Sbjct: 735 LEKSKSLNNSLAALESKNKKLENDLNLLTEKLNKKNADTESFKNTIRE 782
Score = 26.6 bits (56), Expect = 4.1
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 167 LQQEISTALNTTIKKIVVTE-FKNVLDKID----GFRDSLEFMSTKYEEMKSKFESETST 221
L+ +++ KK TE FKN + + + D+L ++K+K E++
Sbjct: 755 LENDLNLLTEKLNKKNADTESFKNTIREAELSKKALNDNLGNKENIISDLKNKLSEESTR 814
Query: 222 ITELKCDNERLKTTIRDLTARLNA 245
+ EL+ + K I L R++A
Sbjct: 815 LQELQSQLNQDKNQIETLNERISA 838
>SPBC1539.05 |cog3||Golgi transport complex subunit Cog3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 735
Score = 26.6 bits (56), Expect = 4.1
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 187 FKNVLDKIDGFRDSLEFMSTKYEEMKSKFESETSTITELK--CDN 229
F N++D+I G +++E ST MK KFES ++E C+N
Sbjct: 111 FTNIIDQILGQTNNIE--STLL-SMKEKFESSEKKLSEFSEMCEN 152
>SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 419
Score = 26.6 bits (56), Expect = 4.1
Identities = 15/59 (25%), Positives = 28/59 (47%)
Query: 201 LEFMSTKYEEMKSKFESETSTITELKCDNERLKTTIRDLTARLNAPLRRIIDEYHSLIT 259
LE +S YEE + + E+ T TE + K + + + + ++IDEY ++
Sbjct: 358 LEEVSKSYEESREEIEALHETFTEEVTSFQSTKRLKEEKIIQEKSRVDKMIDEYRQKLS 416
>SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 26.2 bits (55), Expect = 5.4
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 167 LQQEISTALNTTIKKIVVTEFKNVLDKIDGFRDSLEFMSTKYEEMKSKFES---ETSTIT 223
LQ E++ N +V +++L ++ G + ++++ T+ EE+ K+E+ E S+
Sbjct: 557 LQDEVNQLRNEL--DLVNKRNEDLLIELQGKEEKIQYLETENEEVLQKYENLQEELSSTR 614
Query: 224 ELKCDNE 230
+L NE
Sbjct: 615 KLLTKNE 621
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 26.2 bits (55), Expect = 5.4
Identities = 17/105 (16%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Query: 169 QEISTALNTTIKKIVVTEFKNVLDKIDGFRDSLEFMSTKYEEMKSKFESETSTITELKCD 228
+++S +++ K+ V E K+ + + +Y ++ FE E D
Sbjct: 1227 KDLSNKVSSLTKQ--VNELSPKASKVPELERKITNLMHEYSQLGKTFEDEKRKALIASRD 1284
Query: 229 NERLKTTIRDLTA--RLNAPLRRIIDEYHSLITVMPDLDVFHDKL 271
NE L++ +L + +L +++++E + ++ ++ + +K+
Sbjct: 1285 NEELRSLKSELESKRKLEVEYQKVLEEVKTTRSLRSEVTLLRNKV 1329
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 25.8 bits (54), Expect = 7.1
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 190 VLDKIDGFRDSLEFMSTKYEEMKSKFES 217
+ DK+ G S +S YEE++SKF++
Sbjct: 1484 IYDKLPGSDMSFPSISKIYEELRSKFDN 1511
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1018
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 56 ECCSKEPKTGNINTPVRSTPYSDTKSQEED 85
E + + K+ PV S P SD KSQE D
Sbjct: 377 EALTAKLKSNEERLPVSSQPGSDAKSQEFD 406
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 25.4 bits (53), Expect = 9.4
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 59 SKEPKTGNINTPVRSTPYSDTKSQEEDVQGQSNV 92
S P TGN+ + + S T + V G SNV
Sbjct: 1113 SAVPNTGNLKDALEGSAVSKTDDVDNVVSGHSNV 1146
>SPAC31A2.16 |gef2||RhoGEF Gef2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1101
Score = 25.4 bits (53), Expect = 9.4
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 208 YEEMKSKFESETSTITELKCDNERLKTTIRDLTARLNAPLRRIIDEYH-SLITVMPDLDV 266
YE+++ K+ + + ++ NE K +I L R N L+ I SLI +LD
Sbjct: 1018 YEDLRRKYHLTLARLAQMTRLNEDSKKSIPLLYDRFNHDLKLIKQSVQASLIRKQCELDT 1077
Query: 267 FHDKLRVFKDRIGKDE 282
L ++ ++ E
Sbjct: 1078 AKWTLEEYESKLNAKE 1093
>SPBC691.02c |||RINT1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 678
Score = 25.4 bits (53), Expect = 9.4
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Query: 170 EISTALNTTIKKIVVTEFKNVLDKIDGFRDSLEFMSTKYEEMKSKFESETSTITELKCDN 229
+I T + + + KIV+T +V + D+++ + + KFE ST+ L ++
Sbjct: 569 QIGTLVESWMIKIVMTHQFSVRGGVQFAMDAMQIVLEFSDYPLLKFERLMSTVELLSLES 628
Query: 230 ERLKTTIRDLTARLNAPLRRIIDEY 254
K I+ L +N IDE+
Sbjct: 629 GENK-LIKKLIIEINQKNYDFIDEF 652
>SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 547
Score = 25.4 bits (53), Expect = 9.4
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Query: 166 ILQQEISTA---LNTTIKK---IVVTEFKNVLDKIDGFRDSLEFMSTKYEEMKSKFESET 219
+L+ +I+TA NT ++ I ++ K DK+ LE + YEE KS E+
Sbjct: 395 VLKTKIATASSNANTDLRSRVDISESKLKKRDDKLKRVSSQLEHLKHNYEEEKSMNENLL 454
Query: 220 STITELKCDNERLKTTIRDLTARLN 244
I L+ N I + ++N
Sbjct: 455 VRIQTLEKQNTTKSDQIVSMQFQIN 479
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.132 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,062,264
Number of Sequences: 5004
Number of extensions: 40027
Number of successful extensions: 206
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 176
Number of HSP's gapped (non-prelim): 40
length of query: 285
length of database: 2,362,478
effective HSP length: 72
effective length of query: 213
effective length of database: 2,002,190
effective search space: 426466470
effective search space used: 426466470
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 53 (25.4 bits)
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